G142242


Basic Information

Item Value
gene id G142242
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26018719 ~ 26055565 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210059
AGTGTGGAGTCAGCAGAGCTTCAGCCCGATCCCGCGGTTTCTTCGGCGGCTTCGAGGCGCATGTTTCGCGCCGAACTCGAGCTAAGATTAACCGCGACGCCGCCTCAGCACTTTCACCTGCTGAACGCTCACATTCTACACGCTTTCCGCAGTAAAACGCGTCCAATCCGTGACTTCAGACTCTACGTCGACATGTTTTTGCAGTCAAACACTTCTAATCTGAGGTGCTTTTCTTTAAGtcggtttgttgttgtttaacgTGACGTTACCTGCTAACCGCGCGctgaagacacacacaaactttgGTTCAGATCGACGCGAGAAACTATAAAAGGTTCGAATGAACGTCTCTTATGAATCTTGAGCGTTTATACCGTGTTTACGCTGATTtatgattaattgatttatgGAGAAAGCGCCGGTGTTTGACAGCAGCGAACTTGCGTTTGATTGACAGCGGCAGGGTGTGGGCGGGGCCATGCTGTGGGCGGGGCCAGAGTATCAGCGGGCGGAAACACGAGACGGAGCTCGACGTCACGAGAAATAAATACCTCAACATCGAGATCAAGAAAGCGTTTAATTCAgcgttttctgtgttttctgcaCAACTGGAGATGTTGCTTGtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtg

Function

GO:

id name namespace
GO:0050879 multicellular organismal movement biological_process
GO:0050881 musculoskeletal movement biological_process
GO:0006941 striated muscle contraction biological_process
GO:0003009 skeletal muscle contraction biological_process
GO:0003010 voluntary skeletal muscle contraction biological_process
GO:0031444 slow-twitch skeletal muscle fiber contraction biological_process
GO:0014721 twitch skeletal muscle contraction biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction

RNA

RNA id representative length rna type GC content exon number start site end site
TU210059 True 660 lncRNA 0.50 2 26018719 26055565

Neighbor

gene id symbol gene type direction distance location
magl NA coding downstream 41891 25963983 ~ 25976828 (-)
LOC122324391 LOC107712205,LOC107564326,LOC107659794 coding downstream 59017 25944134 ~ 25959702 (-)
pak5 pak5,LOC107659820,LOC107731598 coding downstream 83647 25888169 ~ 25935072 (-)
LOC122325519 plcb1,LOC107663155,LOC108423552,LOC103033987,LOC107678738,LOC107728323 coding downstream 242556 25754500 ~ 25776163 (-)
trnas-gcu_30 NA coding downstream 384776 25633860 ~ 25633943 (-)
znf410 LOC107659809,LOC107712212,LOC107550151 coding upstream 16840 26072405 ~ 26079546 (-)
cipcb NA coding upstream 27524 26083089 ~ 26087970 (-)
LOC122324579 LOC107756053,LOC107659807,LOC107756058,LOC107659806 coding upstream 45768 26101333 ~ 26103223 (-)
LOC122324575 LOC107659807,LOC107756058,LOC107659806 coding upstream 55911 26111476 ~ 26113724 (-)
LOC122324578 LOC107659807,LOC107659806,LOC107756058 coding upstream 67788 26123353 ~ 26125448 (-)
G142261 NA non-coding downstream 6471 26010650 ~ 26012248 (-)
G142260 NA non-coding downstream 8331 26006269 ~ 26010388 (-)
G142201 plcb4,LOC107557901,LOC106608066,LOC107659823,LOC107564330 non-coding downstream 153640 25838372 ~ 25865079 (-)
G142042 NA non-coding downstream 439458 25514247 ~ 25579261 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding upstream 94326 26149891 ~ 26174879 (-)
G142282 NA non-coding upstream 134498 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 174741 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 212347 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 214072 26269637 ~ 26270044 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 264711 25747667 ~ 25754008 (-)
G142058 NA other downstream 368626 25648492 ~ 25650093 (-)
mettl24 LOC107738893 other downstream 609944 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 641303 25326508 ~ 25377416 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 1166940 24838652 ~ 24851779 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other upstream 32850 26088415 ~ 26096971 (-)
G142281 NA other upstream 130095 26185660 ~ 26187919 (-)
G142278 NA other upstream 176459 26232024 ~ 26234245 (-)
rps29 NA other upstream 427756 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 867250 26922815 ~ 26924987 (-)

Expression


Co-expression Network