G142273 (LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860)


Basic Information

Item Value
gene id G142273
gene name LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26149891 ~ 26174879 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210125
GATGCCCTTACCAGGATGACCGTTATCTGACCACATTGGTTCCAGTAACTGGATCATCTGGTGTGCAGTTCCCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAACCTCACTGGCTCCTCTGCAGGAAACGATCTTCATCCACTGCAGTACAGAGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCACCAGGAAACGAAGAGCTACTCCTATCCAGGCCATCTTTGGTGAACCAACTGTGGTTTCTAGTGGACAAGTTACTCTAGTCATGTAAATctagttttttaataaaccttttGTGGATCAAAA
>TU210146
CCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAACCTCACTGGCTCCTCTGCAGGAAACGATCTTCATCCACTGCAGTACAGAGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCACCAGGAAACGAAGAGCTACTCCTATCCAGGCCATCTTTGGTGAACCAACTGTGGTTTCTAGTGGACAAGTTACTCTAGTCATGTAAATctagttttttttttaataaaccttttGTGGATCAAAA

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210125 True 334 lncRNA 0.46 3 26168534 26174879
TU210146 False 267 lncRNA 0.45 4 26149891 26159582

Neighbor

gene id symbol gene type direction distance location
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding downstream 5472 26140448 ~ 26144419 (-)
LOC122324577 LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860 coding downstream 15098 26132560 ~ 26134793 (-)
LOC122324578 LOC107659807,LOC107659806,LOC107756058 coding downstream 24443 26123353 ~ 26125448 (-)
LOC122324575 LOC107659807,LOC107756058,LOC107659806 coding downstream 36167 26111476 ~ 26113724 (-)
LOC122324579 LOC107756053,LOC107659807,LOC107756058,LOC107659806 coding downstream 46668 26101333 ~ 26103223 (-)
actr10 actr10,LOC106608088 coding upstream 2022 26176901 ~ 26184090 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding upstream 22700 26197579 ~ 26211185 (-)
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding upstream 39784 26214663 ~ 26216463 (-)
fkbp3 fkbp3,LOC107717646 coding upstream 60540 26235419 ~ 26242824 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding upstream 110934 26285813 ~ 26287605 (-)
G142247 NA non-coding downstream 72818 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 94326 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 116693 26017371 ~ 26033198 (-)
G142261 NA non-coding downstream 137643 26010650 ~ 26012248 (-)
G142260 NA non-coding downstream 139503 26006269 ~ 26010388 (-)
G142282 NA non-coding upstream 15184 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 55427 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 93033 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 94758 26269637 ~ 26270044 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 136332 26311211 ~ 26311698 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 52920 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 95422 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 395883 25747667 ~ 25754008 (-)
G142058 NA other downstream 499798 25648492 ~ 25650093 (-)
mettl24 LOC107738893 other downstream 741116 25294844 ~ 25408775 (-)
G142281 NA other upstream 10781 26185660 ~ 26187919 (-)
G142278 NA other upstream 57145 26232024 ~ 26234245 (-)
rps29 NA other upstream 308442 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 747936 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1054924 27229803 ~ 27257482 (-)

Expression


Co-expression Network