G142278


Basic Information

Item Value
gene id G142278
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26232024 ~ 26234245 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210165
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacacacacactcactaacacacacactcactaacacacacactcactaacacacacactcacacacacacacactcactaacacacacact
>TU210166
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacacacacactcactaacacacacactcactaacacacacactcactaacacacacacacacacacacacacacacacacacacactaacacacacacactcactcactaacacacacactcactacacacacacactcactaacacacacacactcactaacacacacacactcac
>TU210167
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacactcactaacacacacactcactaacacacacactcactaacacacacacactcactaacacacacacactcactaacacacacacactcac
>TU210168
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacacacacactcactaacacacacactcactaacacacacactcactaacacacacacacacacacacacacacacacacacacactaacacacacacactcactcactaacacacacactcactaacacacacactcactaacacacacactcactaacacacacacacacacacacacactcactaacacacacacacacactcacacacacttactttaGGTGTCTGTCCTCGTACTTTACCGGCACGAGCCAGAGATCCGTGGACTTTACCTGATCTCCCAGAAGTCTGGCGGTCAGCTCGATGGTGCAGTGCTCCGAGACGCCGCTGTCCAGCAGAGACACATGATCCTCCAGAGGAGCTCCGGACAGAAGAAGAACCTGGTCCTCCACAGACAGCCCTTCCAGAGCCTGGACGCGAgcctgaggacacacacacacacacacacacacacacgggtcagacacacacacacacacacgggagaCGTCTTCAGGAGCGGAGCGGCTCACCTTCAGGTCAAGGACGCTCTCCTGGCCGGTCACCTGGAGCGTGTGAAGAGTCTGAGCGCGGAGGAACAGCTGCATGATGAGCTGAAACAACAACCAGGTGACAA
>TU210169
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacacacacactcactaacacacacactcactaacacacacactcactaacacacacacacacacacacacacacacactaacacacacactaacacacacac
>TU210170
taaaatgaacaatgaaattaaaatttgagATGTAATTGTTACGGCTGTCAagcaattgcaatttttttttttgcatttgataaattgctaaaaaaacatttcatgttttataattaaaaacaaaagcactgtGGTCCACACCTCCCAGAAGTCTGGCGGTCAGCTCGATGGTGCAGTGCTCCGAGACGCCGCTGTCCAGCAGAGACACATGATCCTCCAGAGGAGCTCCGGACAGAAGAAGAACCTGGTCCTCCACAGACAGCCCTTCCAGAGCCTGGACGCGAgcctgaggacacacacacacacacacacacacacgggtcagacacacacacacacacacgggagaCGTCTTCAGGAGCGGAGCGGCTCACCTTCAGGTCAAGGACGCTCTCCTGGCCGGTCACCTGGAGCGTGTGAAGAGTCTGAGCGCGGAGGAACAGCTGCATGATGAGCTGAAACAACAACCAGGTGACAA
>TU210171
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacacacacactcactaacacacacacacacactcacacacacttactttaGGTGTCTGTCCTCGTACTTTACCGGCACGAGCCAGAGATCCGTGGACTACCTCCCAGAAGTCTGGCGGTCAGCTCGATGGTGCAGTGCTCCGAGACGCCGCTGTCCAGCAGAGACACATGATCCTCCAGAGGAGCTCCGGACAGAAGAAGAACCTGGTCCTCCACAGACAGCCCTTCCAGAGCCTGGACGCGAgcctgaggacacacacacacacacacacacacacacacgggtcagacacacacacacacacacgggagaCGTCTTCAGGAGCGGAGCGGCTCACCTTCAGGTCAAGGACGCTCTCCTGGCCGGTCACCTGGAGCGTGTGAAGAGTCTGAGCGCGGAGGAACAGCTGCATGATGAGCTGAAACAACAACCAGGTGACAA
>TU210172
AGGACTGAAGGAACACAGAACACTGAgtctttatttcatgtttatttctctctctcggAGTTTCTTCTCAGTTCTTTAGGAGTTGGCGTTCGGGCCCTTCTTCTTGCCGAAGGTCGGGACCACGTTCACGAAGCGCCGGTTGTACTGGATCCGACGCTTGGCGCGGcccgtcttcttcttcttcttctcctgcttgTCCACCTACAGACACCAGGAGTCAGACCTCAGAGGAACCTCAGCAccgacaacacacacacacacacactcactaacacacacactcactaacacacacacacactcactaacacacacacactcactaacacacacacactcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210165 False 346 lncRNA 0.51 3 26233239 26234245
TU210166 False 432 lncRNA 0.50 2 26233585 26234245
TU210167 False 349 lncRNA 0.50 3 26233585 26234245
TU210168 True 873 TUCP 0.53 5 26232024 26234245
TU210169 False 357 lncRNA 0.50 3 26233360 26234245
TU210170 False 478 lncRNA 0.50 2 26232024 26232545
TU210171 False 696 lncRNA 0.56 4 26232024 26234245
TU210172 False 341 lncRNA 0.51 3 26233585 26234245

Neighbor

gene id symbol gene type direction distance location
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding downstream 15561 26214663 ~ 26216463 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding downstream 20839 26197579 ~ 26211185 (-)
actr10 actr10,LOC106608088 coding downstream 47934 26176901 ~ 26184090 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding downstream 55954 26168534 ~ 26176070 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding downstream 68973 26159166 ~ 26163051 (-)
fkbp3 fkbp3,LOC107717646 coding upstream 1174 26235419 ~ 26242824 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding upstream 51568 26285813 ~ 26287605 (-)
LOC122324888 NA coding upstream 53592 26287837 ~ 26288247 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding upstream 55524 26289769 ~ 26292156 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding upstream 65252 26299497 ~ 26301875 (-)
G142280 NA non-coding downstream 541 26230306 ~ 26231483 (-)
G142282 NA non-coding downstream 40106 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 57145 26149891 ~ 26174879 (-)
G142247 NA non-coding downstream 154951 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 176459 26018719 ~ 26055565 (-)
G142297 NA non-coding upstream 33667 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 35392 26269637 ~ 26270044 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 76966 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 85625 26319870 ~ 26320141 (-)
G142349 NA non-coding upstream 129774 26364019 ~ 26381273 (-)
G142281 NA other downstream 44105 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 135053 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 177555 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 478016 25747667 ~ 25754008 (-)
G142058 NA other downstream 581931 25648492 ~ 25650093 (-)
rps29 NA other upstream 249076 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 688570 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 995558 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1241849 27476094 ~ 27478227 (-)

Expression


Co-expression Network