G142280


Basic Information

Item Value
gene id G142280
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26230306 ~ 26231483 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210174
ACCAATCTTACAGTAAAAGCAAcaatttattcttttatgttacttgtaaaaagttataaaatgttaaatcatcacgtacacataataaacattttaaaaatgattgcgTCTTAAATTAGCAGCATGTTAAACTCGTGCTCCACTCTCAAACGTTATTCGTAAGgattttaaaagtcaaataCGACAGTTATGGCGACGTGAGGAACATAATTATTTCAAGTGTTAACAGTAACATTTACAGTAATGAGACAATGACCAAGAATCCTCAAAAACGACacgtttaaatataatttttgctgCACCGATCACGGCATGCGTTTaatcagagaagaagaagagcaaaAGAAGAGTAAAAGAGTAGAAGAAGAGCAGAGGATGTGTGAGGAGCGCGCGTGAGGCGCGTGGGCCCCGGAGAGACGCACGCGGAGTAAATAAACCCGTTTAAACGACTCGTTCTGACGGAGTTCCGCTCGAGATCAGAGTTTAGAACACGGCGACGCTTAAAACAGACATTCGTTCACCGTTAAAGCGCAATAAAGACCTCGAACGCGACAAATAAGCGATCTGATCAGCGGGCCTTACATTGGTTGATGCTAGTCGATCCACACCTGGGCGAGAAAAGGACAGCGCGCATGCGCGGAGCAAAGAACTCTGGGAAGGGCGCTGCCCACGTGACCGTGACGTAACTGTGACGTGTCCGTGACTCGGCCGGTCTTACTTTAACTGGTATAACATCTACATTAATagCCCTGGATCACACCACAACATCATTTCACTGGAAGCTGTACTTCTACAAATAttatatgacaaataaaatcatgacaACCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210174 True 830 lncRNA 0.42 2 26230306 26231483

Neighbor

gene id symbol gene type direction distance location
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding downstream 13843 26214663 ~ 26216463 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding downstream 19121 26197579 ~ 26211185 (-)
actr10 actr10,LOC106608088 coding downstream 46216 26176901 ~ 26184090 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding downstream 54236 26168534 ~ 26176070 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding downstream 67255 26159166 ~ 26163051 (-)
fkbp3 fkbp3,LOC107717646 coding upstream 3936 26235419 ~ 26242824 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding upstream 54330 26285813 ~ 26287605 (-)
LOC122324888 NA coding upstream 56354 26287837 ~ 26288247 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding upstream 58286 26289769 ~ 26292156 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding upstream 68014 26299497 ~ 26301875 (-)
G142282 NA non-coding downstream 38388 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 55427 26149891 ~ 26174879 (-)
G142247 NA non-coding downstream 153233 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 174741 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 197108 26017371 ~ 26033198 (-)
G142297 NA non-coding upstream 36429 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 38154 26269637 ~ 26270044 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 79728 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 88387 26319870 ~ 26320141 (-)
G142349 NA non-coding upstream 132536 26364019 ~ 26381273 (-)
G142281 NA other downstream 42387 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 133335 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 175837 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 476298 25747667 ~ 25754008 (-)
G142058 NA other downstream 580213 25648492 ~ 25650093 (-)
G142278 NA other upstream 541 26232024 ~ 26234245 (-)
rps29 NA other upstream 251838 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 691332 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 998320 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1244611 27476094 ~ 27478227 (-)

Expression


Co-expression Network