G142333 (LOC102197881)


Basic Information

Item Value
gene id G142333
gene name LOC102197881
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26478551 ~ 26479201 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210251
ggaaacttgagtcacagtttcaacacagtgactctaggagcctttggcagggactgagaaacatcacggactataaaacgccaacctccagagtggagagcgcggatgcttctctggcagacgagctaaacaccttttatgctcgtttcgaggctgcagctaatcacgctagcgccgctagcggcatgatgaacagcacgcacgccgagagagccggagaggaaatcgcgttcaccatttcggagcacgacgtaaggagggcattcaggagagtgaacaccaggaaggcagcaggacctgacggcatcacaggtcgggttctgagagcctgtgctgaccagctagcaccggtgttcactgagatatttaatctctccctgaaacagtctgtagtcccctcgtgtttcaaagagtccatcattgttcctgtgccgaagaaacctcaaccatcttgccttaatgattaccgccctgtagctctgacgtctgtagtgatgaagtgcttcgagagactcgtcagagacttcatcaccgcatcactaccggacacactcgacccactacagtttgcttaccgccaaaaccggtctacggaggatgccatcacacacctcctccacacaaccacaagccacctggattttaggaaag

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210251 True 651 TUCP 0.53 1 26478551 26479201

Neighbor

gene id symbol gene type direction distance location
faua fau,LOC107557010,LOC107567395,LOC107659798,LOC107717644,LOC107704371,LOC105017549 coding upstream 244333 26230786 ~ 26234218 (+)
prpf39 prpf39,LOC107704382,LOC107659803,LOC107713858,LOC107567385 coding upstream 248806 26218579 ~ 26229745 (+)
LOC122324376 clg18h14orf37,cunh14orf37,c25h14orf37,LOC107574488 coding upstream 283589 26185676 ~ 26194962 (+)
entpd5b entpd5b,LOC107756050,LOC107704388 coding upstream 409506 26055121 ~ 26069045 (+)
yy1b LOC107756049,LOC107704390,LOC107712210,LOC107659816,LOC107564321 coding upstream 447565 26024861 ~ 26030986 (+)
trnas-gcu_31 NA coding downstream 78482 26557683 ~ 26557764 (+)
mgat2 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding downstream 84455 26563656 ~ 26565704 (+)
LOC122324339 LOC107548517,LOC107662059 coding downstream 241297 26720498 ~ 26725162 (+)
LOC122324696 slc25a45,LOC107662097,LOC107702892,LOC107722745 coding downstream 439854 26919055 ~ 26926040 (+)
LOC122325624 NA coding downstream 461785 26940986 ~ 26941120 (+)
G142331 NA non-coding upstream 10699 26467472 ~ 26467852 (+)
G142306 NA non-coding upstream 112909 26329725 ~ 26365642 (+)
G142305 NA non-coding upstream 150283 26322935 ~ 26328268 (+)
G142304 NA non-coding upstream 166593 26311550 ~ 26311958 (+)
G142300 NA non-coding upstream 176637 26291249 ~ 26301914 (+)
G142334 NA non-coding downstream 25123 26504324 ~ 26509545 (+)
G142336 NA non-coding downstream 78257 26557458 ~ 26560303 (+)
G142337 NA non-coding downstream 89953 26569154 ~ 26569761 (+)
G142343 NA non-coding downstream 107427 26586628 ~ 26587286 (+)
LOC122325353 NA non-coding downstream 246333 26725534 ~ 26727024 (+)
G142173 NA other upstream 221317 26235421 ~ 26257234 (+)
G142123 LOC107756040,LOC107704367,LOC107712211,LOC107564320,LOC107659815,LOC108257655,LOC108411613 other upstream 439343 25916034 ~ 26039208 (+)
evlb evlb,LOC107756048,LOC107704391,LOC107564322,LOC107659817,LOC103152656,LOC105929101,LOC106954543,LOC106922124,LOC107090853 other upstream 454319 26003763 ~ 26024232 (+)
LOC122325160 LOC107564323,LOC107659819 other upstream 475628 25996414 ~ 26002923 (+)
LOC122324336 LOC107564333,LOC107557900,LOC107659797,LOC107712192 other upstream 649636 25776475 ~ 25828915 (+)
G142416 NA other downstream 424046 26903247 ~ 26905157 (+)
LOC122325079 dlg4,LOC107556052,LOC107662062,LOC106563427,LOC106603100 other downstream 493044 26972245 ~ 27093757 (+)

Expression


Co-expression Network