G142354


Basic Information

Item Value
gene id G142354
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26472357 ~ 26472760 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210362
GAGCCATCCCAGGTGTATGTGACTGTCTTCTCTTGTAAGTTTGGTAATGCTgctggatagtggccattattctgaagctccgtaaatctgATTCGTCCACAAGAACTGCGACGGAAAACGAACCTATACGCCTCCGGGGGGTTATACACGGGTTTctgttacaaaaataattctagCTTGaaaattacttattattaaaGACTTATTATTTCCCTCGAGAACGCCGAGTTCCGGCTCCGACTGACGCGACGTACGACGAAGAAGCCGGAGTCGGTTATTACGTTTATTATGTTATCGtttcaaaactagaaatattctTCAGACGTCATGAGATAACCCCCGAAGCCGTATCGGTTCGTTTTTAATCGCAGTACTTGCGTATATATCTGATCACGAGCTtacaa

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU210362 True 404 lncRNA 0.43 1 26472357 26472760

Neighbor

gene id symbol gene type direction distance location
LOC122325425 mdga2,LOC107704381,LOC107556994,LOC108257548,LOC108411484,LOC106571582,LOC106608140 coding downstream 32434 26325231 ~ 26439923 (-)
LOC122325330 NA coding downstream 164545 26307401 ~ 26307812 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding downstream 170482 26299497 ~ 26301875 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding downstream 180201 26289769 ~ 26292156 (-)
LOC122324888 NA coding downstream 184110 26287837 ~ 26288247 (-)
LOC122325332 wdr20,LOC107730607,LOC107564583,LOC107704379 coding upstream 97007 26569767 ~ 26574013 (-)
trnas-gcu_32 NA coding upstream 141883 26614643 ~ 26614730 (-)
ganaba zgc:171967,LOC107662060,LOC107702959,LOC107722752,LOC107548499,LOC108427707 coding upstream 453473 26926233 ~ 26940284 (-)
her7 LOC107548512,LOC107662101,LOC107740036,LOC107556023,LOC107722746,LOC107702916 coding upstream 474570 26947330 ~ 26948895 (-)
LOC122325133 LOC107560346,LOC107740038,LOC107662093 coding upstream 673716 27146476 ~ 27148045 (-)
G142349 NA non-coding downstream 91084 26364019 ~ 26381273 (-)
G142347 NA non-coding downstream 152216 26319870 ~ 26320141 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding downstream 160659 26311211 ~ 26311698 (-)
G142299 NA non-coding downstream 202313 26269637 ~ 26270044 (-)
G142297 NA non-coding downstream 204232 26267912 ~ 26268125 (-)
G142355 LOC102197881 non-coding upstream 5791 26478551 ~ 26479196 (-)
G142356 NA non-coding upstream 6542 26479302 ~ 26479785 (-)
G142362 NA non-coding upstream 74428 26547188 ~ 26555553 (-)
G142381 NA non-coding upstream 201669 26674429 ~ 26674883 (-)
G142384 NA non-coding upstream 243432 26716192 ~ 26716709 (-)
G142278 NA other downstream 238112 26232024 ~ 26234245 (-)
G142281 NA other downstream 284438 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 375386 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 417888 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 718349 25747667 ~ 25754008 (-)
rps29 NA other upstream 10561 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 450055 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 757043 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1003334 27476094 ~ 27478227 (-)

Expression


Co-expression Network