CI01000001_09267532_09267951


Basic Information

Item Value
gene id CI01000001_09267532_09267951
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9267462 ~ 9268132 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09267532_09267951.mRNA
GTATAAATGATGGAAAACTAGAAGCCATGATTGCCACTATTAAGCTTTCAGCCAATTTGGAAAGACCACAATGGTAAAGTCCAATCGGCCCACAATGCACTGCAACACTGTAGGAGAAAGAGAGGACAGAGAGGAGGAGACAGAGACTCAACCACACAAATGTACGCACAGGGACAATGAGAGTCCTCATCACACAAAAGGCAGTGGCACTGAGGGGTACAATGGGGCTTTTGTGGAATGTGTAGAGAGGAAGATGTGCAGGCAAAACACTACGGCCTGTATCGAATCAATTCCCCCACACCATCCAACCCCAGCTCACACACTGACCTCACACCCACAAACTACTCCAAACAGAGACAAGGGCGTTCAGGGCGTAACGCTGGCTACCCGAAAAGCTGTCAGTCAGGAACAGGTCAAGATGGATCCTGCAGACTTTTTCTGTATTTTATGGATTGATTTTAGTGAAAATCTGTGGAATTCTTCAGAATGAATTTGAGTATGGTAAAATGTGTGCACTACACTCTTCTGAGAAGCTGGAAGTATTATGGAATTTAAAAGTTGAATATTTATGAACATGCAAAGTGTGAAACTGGCATAAATGACGATTCTGCGGGAAGATGCAGAACTTTCTGCAGGCGTAGATTCCACATGGACCTAGTCGTGACATATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09267532_09267951.mRNA True 671 mRNA 0.44 1 9267462 9268132

Neighbor

gene id symbol gene type direction distance location
CI01000001_09226223_09227218 NA coding upstream 40216 9226089 ~ 9227246 (+)
CI01000001_09186450_09203866 FMNL3 coding upstream 63596 9186333 ~ 9203866 (+)
CI01000001_09164619_09166621 NA coding upstream 100737 9164541 ~ 9166725 (+)
CI01000001_09147684_09162673 ESYT1A coding upstream 104247 9147684 ~ 9163215 (+)
CI01000001_09132867_09145278 PA2G4.L, PA2G4-B, PA2G4B, PA2G4, PA2G4A coding upstream 121943 9132867 ~ 9145555 (+)
CI01000001_09285920_09289361 NA coding downstream 17656 9285788 ~ 9289441 (+)
CI01000001_09308544_09311741 NA coding downstream 38569 9306701 ~ 9312011 (+)
CI01000001_09334528_09350703 RBMS2B coding downstream 66396 9334528 ~ 9351363 (+)
CI01000001_09383903_09384322 NA coding downstream 115771 9383899 ~ 9384678 (+)
CI01000001_09400828_09406357 HNF4A coding downstream 130899 9399031 ~ 9407223 (+)
G17507 NA non-coding upstream 123628 9143361 ~ 9143834 (+)
G17388 NA non-coding upstream 176077 9088542 ~ 9091385 (+)
G17385 NA non-coding upstream 238511 9028681 ~ 9028951 (+)
G17359 NA non-coding upstream 238943 9028111 ~ 9028519 (+)
G17566 NA non-coding downstream 113003 9381135 ~ 9381660 (+)
G17581 NA non-coding downstream 205479 9473611 ~ 9473929 (+)
G17583 NA non-coding downstream 206448 9474580 ~ 9474783 (+)
G17587 NA non-coding downstream 289461 9557593 ~ 9557897 (+)
G17354 NA other upstream 26785 9234463 ~ 9240677 (+)
G17353 NA other upstream 38603 9216022 ~ 9228859 (+)
G17234 NA other upstream 1234979 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1726876 7531541 ~ 7540586 (+)
G15995 NA other upstream 3552511 5711885 ~ 5714951 (+)
CI01000001_09435836_09436037 NA other downstream 150196 9435836 ~ 9436373 (+)
G18896 NA other downstream 971768 10239900 ~ 10241492 (+)
G18873 NA other downstream 988980 10223879 ~ 10260714 (+)
G18872 NA other downstream 1003014 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 1125425 10394851 ~ 10396705 (+)

Expression


Co-expression Network