CI01000001_09308544_09311741


Basic Information

Item Value
gene id CI01000001_09308544_09311741
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 9306701 ~ 9312011 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_09308544_09311741.mRNA
ATATAAAAACCCCAAAGCTAACTAATAACACTAGACTGTGCTGAGAAATTTAACAGCCTTAAAAGCTTTTAAATGATACCAGTTTGCTCATTAACTTTGGTAGCCCTAAAATAAAGTTGTTATTCTCAACTAAAACTATTACAAATGGTATTTGTCAATTGAAATAAAGCTAAAATTAAAGCTGCAGTCTGTAAGTTTTGCCTCTTTGTCACCATCTCTGTTTGAAACCTGCAATTGCAGTTACTTGCGGAATTATCATCTTTACGTGGGTTGTGCAACAGCACGGCTCCTCAGCACAGATTAATCTAATGCTTTAAGGAGAATGTTTGCTGTCAGTCACCGCACCGGCGGATACTGTACTTCAAAATCACAGACTGTAGTCTTGAAAGTATGACTAAAATAAGAATTTTCACCGGAAAATGTCATCTGAACAAATAAGTAACAAATCTGCCACTTTTGTTCTGACCAACTGAGGAAAAAAGCATTACAATAAATCGCGCTAAATCTAACGATCGCTTAGCTTATATCACATAAAACCGTGCAAATTATTATTATTGCTATACTTTGTTCTCAAATTGTTAATGTTAACAACATTAGCATTGCATGACTACGTGTATTTAGTGTGTATTAACGTTACCTGTAGATTTCAATTTCTGTTTAGTCTAATCTCTATTTGTCTATTTGTCATAAGAGGATTGTAGAAACCTCCGGAGTATCTGAACCACAAAGACAGGTGTGTACTTAAGATAATGCACTAATCTCTAATTGTCTATTTGTCATACCATACAATCCGCCATAAAAATGATAGGTTTAATTATTCCAGCTGGGACTCGTCCTTTATGTAAACAGACTTGATGTAATGACGCGAAGATGAACGGCAGCAAGCTCGAATTTCCCGTGGAAACCTACCAGTACCACTCGAATTACAAAACATTTTTACAAGCTTACCGTTGTGAATCTGGCTAAGGTAAGGAGATAGTTTTGAACACTGGCTGGTTATGCACTTGTTCAAAAATTGATTTTGGATCTTTTTTAACCAAAAAAAATAAAGTTACAGACTGCATCTTTAAATAAAAATATTAGATGAACAACTTAAATGTAAAAAAATTTTGTCTTGGCAACTAACTGAAATAAAATAATTATAATTTAAAGTACTAAAATTACTAAAACTAAATATGAAATAAAAACAAATGAAAGCTAAATAGAAATATATATATATATAAAAAACACTAATAAAATGATAAACCCACATACAATTACTTAAACTTCTACTAAAATTAAAGTGAAAACTGAAAATAAAAGCTAATTCAAAATATTATAAATCCTAAAAATTACTAAAAATAAAATAGAAACTTAAAATTAAATTAGAAACTAAAATTAATAACTATGAATGGAAAATTTGTGAATACTAATAAAAACAAAATTGAAAAGTTTAAAAAAACTCAATTAAAAAAAATCATATTTACATTCCTGTATTTACAGGCATGTTCTAAAGCAGAAAAACTGGTCTACTCCGACACTGAAAAAGCATCAGTTCTCCTGTTCCAACAGTGATCCACGCAAAGCCATGAGTTTCTGCTGTAGTCATTGACAGTAGACTGATTCCAGCTCGGGCCCACTCACCACCTACGCCTGAACCACTGCAAGGGTCACTCTGCATTTCATGAAGCCAAATGCTAACATGTACATTAAATCAGTGCTTAGCATCACATGCCAAAATGTGATCTAATACTGAGGCAATGCCTCTGCAGATACATACTCCCAATCCTGCAAGCCAAGCCCGGTTGCTAATGGCCTGCTTTCCTATTCCTCCCCTGAAGTTACTTATATGATGTCTAGAATAATGGCTTTCCTCTATCCAGATGTTCCAGAGAGGATGGAGGTGGAGCAAGTTAATACAACACAAGAACCTCAACCCTGCCTCTGTCCGCCAGACCATTTCCTTCTCGTTTTCCACAGAGCAGACAAACTCCAGCTAAACCTATTATCAGAGCTCAGCAGAGGCGACTCATCTGCGACAAGTCAAAATCATCTGACAGGCCGTCTGAGACTGTCTCCCAAATGCATGCATGGACAAAATAACACGTTTAATCGTGGTTACTCACCTTCAATGGCTCTGGTGGGATCTGGAACCTCTATTGCAAAAACTAATCCCAGTGAGGGGGAAAAAGTGGAGCCTCTACTGGACTGCTGCATGACGTCACCCACTCGACAGGAGTCCAAAAAACTGAAAGCCCTACGCGGCACTGGGCTGCTGCGCATGCGCGGCTCAGCTTACGGCTGACCATTTGTTTTCCCCCTCATTGGGTGGAAACTGATGCCGCCACGCAGCCATCTTGGCTCTTTCTTTATGGCTCATAGTAATTAATTTGTATTAACTGACTAGCCTGTTTTTGGCTGGATAATTTTTGCAATTAAATGATGAAGTTTTAAAATTCACACGTGTATTACTTTAATTTGTATTGTATGTTTTTCTTCAGCATCAATGATAAACATGATATGATGGATGAAGAAACAGAGTAAAACCTACTACTTATATGTAGCGTAAATAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_09308544_09311741.mRNA False 2554 mRNA 0.36 4 9306701 9312011

Neighbor

gene id symbol gene type direction distance location
CI01000001_09285920_09289361 NA coding upstream 17260 9285788 ~ 9289441 (+)
CI01000001_09267532_09267951 NA coding upstream 38569 9267462 ~ 9268132 (+)
CI01000001_09226223_09227218 NA coding upstream 79455 9226089 ~ 9227246 (+)
CI01000001_09186450_09203866 FMNL3 coding upstream 102835 9186333 ~ 9203866 (+)
CI01000001_09164619_09166621 NA coding upstream 139976 9164541 ~ 9166725 (+)
CI01000001_09334528_09350703 RBMS2B coding downstream 22517 9334528 ~ 9351363 (+)
CI01000001_09383903_09384322 NA coding downstream 71892 9383899 ~ 9384678 (+)
CI01000001_09400828_09406357 HNF4A coding downstream 87020 9399031 ~ 9407223 (+)
CI01000001_09409294_09411908 TTPAL coding downstream 96008 9408019 ~ 9412431 (+)
CI01000001_09435836_09436037 NA coding downstream 123825 9435836 ~ 9436373 (+)
G17326 NA non-coding upstream 32742 9213456 ~ 9273959 (+)
CI01000001_09132867_09145278 PA2G4.L, PA2G4-B, PA2G4B, PA2G4, PA2G4A non-coding upstream 161146 9132867 ~ 9145555 (+)
G17507 NA non-coding upstream 162867 9143361 ~ 9143834 (+)
G17388 NA non-coding upstream 215316 9088542 ~ 9091385 (+)
G17385 NA non-coding upstream 277750 9028681 ~ 9028951 (+)
G17566 NA non-coding downstream 69124 9381135 ~ 9381660 (+)
G17581 NA non-coding downstream 161600 9473611 ~ 9473929 (+)
G17583 NA non-coding downstream 162569 9474580 ~ 9474783 (+)
G17587 NA non-coding downstream 245582 9557593 ~ 9557897 (+)
G17354 NA other upstream 66024 9234463 ~ 9240677 (+)
G17353 NA other upstream 77842 9216022 ~ 9228859 (+)
G17234 NA other upstream 1274218 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 1766115 7531541 ~ 7540586 (+)
G15995 NA other upstream 3591750 5711885 ~ 5714951 (+)
G18896 NA other downstream 927889 10239900 ~ 10241492 (+)
G18873 NA other downstream 945101 10223879 ~ 10260714 (+)
G18872 NA other downstream 959135 10271146 ~ 10281369 (+)
CI01000001_10395420_10396473 NA other downstream 1081546 10394851 ~ 10396705 (+)
CI01000001_09147684_09162673 ESYT1A coding upstream 101301 9147684 ~ 9163215 (+)
G17359 NA non-coding upstream 235997 9028111 ~ 9028519 (+)

Expression


Co-expression Network