tdrd15 (LOC107727677,LOC107678846,LOC107603064,LOC107743302,LOC107697132)


Basic Information

Item Value
gene id tdrd15
gene name LOC107727677,LOC107678846,LOC107603064,LOC107743302,LOC107697132
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 23100351 ~ 23109361 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218618.1
CGGAAAACGTGATGCGCGCGCGGAGGATCTTGTCATGCGAGAAGtgtGTTGACCTTCATATCAAGCTGTGGCAGACGTGCTCAGTGCCAAGACTGCATGGTTAGATTGGATTCATATGCCTAGAGTAGAATGGAGAGgGCAAAAGAGAAGTCAAAGCTCCCAGGTCCATGTGTTTTGTGGCCTATAGAGCTGAAGCTGACTCACATTGACTGCAGTCCTGAAGATACCTTGGTACACTTTCAGGGCCAATATATGACCATCTGTGAACTGGACTACAACATTCTTCAAGTTGAAATTCAAAATGCTGTGAAATCAAACGTTCCTGTTAAAGTTGGAGAGCTTTGTATGGTAGAAGATGTGTCTGGTCGCTGGTTCAGAGGAAGAGTGCAAAACATCCAGAAGGATTTGTTCCACGTGTTTTTGCTGGACCATGGAGATGTATTGATTGTTGGGCCCAGCCATTTGTCCTGTATATCTGACACACTGCTTATGCTCCCACCAAAGATTGTCTGCGGCTTCTTTGCCAACATACTGCCAGTCCAGAACCAATGGAACAGTTTGACAGAGAGTTATTTCTCGTCCTTGATAGGCAGTCAAATTAAAGGATACATCCATGCTCGTCTGCCATACCATGTCCTCCTACTTGAAGTTCCAGACATTAATTGTGACTTGTTAAAACTGAGGCTTGGGAGACATGTGGACACTAGTACATTTCTGCTGCTAGTTGAGATGCTTATTGAGGAACCGATTCCACAAAGCAATGAATCTGTCCCAGATCTCTTGATTGAAAACCAGATAGGGCAAGAATGTTGCCTCAAATCCTCAAGTGTGCTGGGCTTTGATGAGATTCTGTCGCTAAGTGGCCAGAAGCTGAAAGTTGGTCAAAAAGTAAGAGTCGTCGTAGCTGCAGCTACGAACCCCAGATTATTCTATTGTCGACTGTCATCCATGAGCAAGGATCTACAAGAAATGTCAAACAGATTGGGAGTTGCATGTGAATCAGGCTGTGGTTCCCTAAACAGTAAATCACTTGAAAATCTCGGCTTGCTCTGTGCAGTCAAAGGGAAAGATGACAAATGGCACAGAGGGTTTGTGCAATGTCTCCCTCTTAACTCTCAGGTCCAAGTTGTATTTGTTGACAGTGGCTATTGTGAATCGGTAAAAGTAGAAAACATCCTTCAGCTACCATCAGAATTCCTGTCAACACCGATCATGGCATTCCCATGTTCACTTTCAAGCTTGGAAAAACAAGAAGAGACCATTAAAAACCAACAGCTAGAGCTTCTCAAGACTGGGTTGCTGGGGAAGGCGTTGGAGGCTGAAATCGAGGACATTCACAAAGATCAGAACATCTACTTGGTCACACTGAGCACTGATGAGAAGCACTCAGATGAGCAAGCTGAAGTTAAACCACTTGAAAgtgaattgtttgacagcaagTCCAACTTTCTCCACAATGCCTTTGAAAAGATCTCTGCAACAGAGATAAAAGGAATCCAGACTTCTGATACATTTGTTAGTCAAGAAATACCTGACGGTTCTTTTTTTGAGGGTTATGTGGTGCACGTCCAGAATCCAAAACATTTCTGGATAAggacaaaagaacaaaatccTGATTTCGAAAACATAACCAAAGACATCAAAGATTACTTCAGCAAACTACAACTGAATGAGGAGATTTTTGAAGACCCAGTGCCCGGTGCGCTTTGCTGTGCAATGTATGAAACAGACATGCAATACTACAGAGCTCTTGTCGTAGATACTTTGGAAAAAGGAGCTAAGGTGTTTTTCATTGACTTCGGGAACACTGAAAAGGTTCCAAGCATGTTAATTAAGAAGCTTCCCAAAAAGTTTGCTATTCAACCAGAATTTGCACTAAAATGTACGTTAGCACATGTCGCTCCCATTGAGGACATTTGGACAACCACAGCATGCAACTTCTTTAGGCAAGTCACATCAGACAAAACTTTAATGGTTCATGTCATTCACATGAAAAATGGCAAATATGTTGTTGATCTTTTTGAGAGAAGAGCTGAAAGTAATACTAGCATTGCAACCATCATGACAACAGCAAAAATGGCTCTGGATTGGAGATACAACCCGGCACTGGCATCTGTTAAAATGAATCTGTCATATAAAAATAAGGAAATTGGTCtgagcaagaaaaaaattaaaaaggactGTCATGTGGTGACCTTTTGCAAAGTTACATCTTCTATGCCCAACCCATATCAAGTGAAACCAGAATGTGAACCACAGAAGGATGCTGAAAGATGCACTGCCAGTGAGACAACCAAACCTAAGGTCATTTCTGCTGATGCTTTCaaacagatacatttaaaacctGGATCTGAATTAAGTGTAATTTGCTCACACATAAATTCTCCATCAGATTTTTGGTGCCAAAGTGAAAGCGCAAAAGTTGATCTTGACAAATTGATGGAAGACATGCAGGCATTTTACCAAATGCACACAATTGTGTTCAAGTCTCCTGCAGTATGCTGTGCTGTAAAGTCTCCGCAGGACAACCGATGGCATAGAGCATGCGtgttagaagaaaaaaatgaagaacTGTATTTGATGTTGGTTGACTTTGGCGTAATTATCCAGGAAAAGAAGCTAAATATCCAAGCTCTTGCTCCACAGTTCTTCAGACTTCAAGAACAAGCATTCCGATGCACTTTGTACATGATTGAACCTGTTGGAGGTTCTTGGAGTGCAGAAGCATGCAATTTGTTCAGGGATTTTGTGTCTGAGGGTTCGCCCTGTATATGCAGAATTCATTCCCACCTTTATGAGCAAGGAAAAGGTCTCCTCTATGTGGTCACCATTCATACACCACTTCAACATGCCATGACTTACCTTGTAGAGAAGGGCTTTGCAAAGAAAATGCAAACTCGAAAGCAGCTACCCTCATCAGCCCACCCTCGCTCGTTTGTTTATTCTTCTTTCAACATAACTTCTGGAAGTAAAGAACTGGTGCATGTTACTCAAGTTCGCAGTCCTTGGGAAATCTATTTCCAGCTTGACAGGAATACAGAGATCCTTCGTATGCTGATGGAGAGAGCTGCCAAAGAAAGTCAACACTTGACCATGACATCTGGGGACTGCAGTGGTAATGTTTGCCTGGCCAAATATATCTGCGATGGCAATTGGTACAGGGCTCTGACGCATCCTGTACAATCCCATCAGCACATGGGTGTGTTCTTTGTCGATTATGGTGATATGCAGATTTCTGAGAAAGCAAATGTTATGCCGATTCCCACAACAGCAGCGGACCTATTGATGACACCAATGCAGGCTCTGAGATGCAGTCTTTCGAATGTTCCAGAAGGGGAACATTTGCCAGAAGTCAACATGTGGCTTGAGACTGACATGCTCAACAAATCCTTCCATGCCGAGTTTGTTTCAAGGGACAAAAATGGACATTTTGTTTGCAATCTTTATGATGGAAATGTGCATGTCaatgaaaaagtcaaagaaCTCTTGTCAACTCAGGGTGTGGAAGAACATAATCCAGCTGTCAGAATACCTGCATTAGATTCCCACAAAGAAGAAGTGGATGTTGAGGTTTCAAAGAGTAAAGTAAACTCCAAAGCAAGGGGACATGGTAAAACCAAACAGACTGATAAGAAACCTCCAAAGCAGTCTTCCAAAACAGAATGCAAAGGATCAATAAAAGCAGAAAGTCAGGACAAGCCCTGCTCCACTGAAGTGGTGCTGCCTCATCAGATCTTGCCAAAACTTGGCGATCTTCCTTCTGTCAAAATGCAACCAGGTTGTAAAGGTGTGGGCTTTGTCTCTCATTTCAGTTCTGTCAGAAGCTTCTTTGTTCAGATGCAAGACGATGAACCGAACATCCTTCAGATGGGTGAGGAATTAAACAGCTCTGTCTTCAAGGATGACATAAAAAATGtggaaactgaaataaaagaaggGGACCTCGTTGTGGCTGAGTATGAAGAAGACTTGGCTTTGTACAGAGCTGTTGTCATTAATGCATCAAACTGTATCCATTTAGCAGTTGAGTTTATAGATTACGGCAATATTGCAACTGTCAACAGGAAGAACGTTCACATGCTAACAAATAAATTTTTGTCTCAGCCCAGATTGAGCACTCCATGCACACTTGCGAAACCTTACTCTTTTGAAAACAATGACTCTTTTATCAAGGAAGCAGTTGGTAAGCCTTTAGTGGTTGAATTCATTCAAAAGCTTGAAAATTCATGGGAAGTGAGGATTGAGATTGTTGAGGATGGCAATGTGCATAGGGTATCAAAGTATGATAGTGATCAAAGCAAAGATGTAGATTTGGCTAGTCAAGACAAGTTTCCAAAAGCATTCCAGAGTATCAACCAAACTGATTCTTGCATACACAAGTCTCAAGCAGTTAAATCCTTCCAGCAAAAGACCAATTCATACACACAGCACTGCCAATATGAACTTAAAAACACTCTGACACAAATGAGAACCTGTCAGCAAAAGACCAAGCCAAACACACAACAATGCAAAGGTGAATTTGCAAAAAATCAGACAGttgcaacaaaacaaataaaaaaagcagtcaATTTCTTACCGACATGCATCAATACTAAAGAGTTTTCGAAAAAGAAAACgagaaagagaacaaaaagTGCAAAGGCTAGCATCCAACCACCAACTGCAACAAGAATTTTAGTGACTAAAAATTCAAGCATGttgcaagaaaatgttttactttgtaATGCTAATCGCCTTGAAACCTCTAAGTCCTCTGTTAGCGTGGCTCTGCAAGATGCGAAGGAGTCGGTGAAAAGTCCTGATAAGTCACTTGACCATCCTCGCCTCCAAGACATGTCTTCAAAGAGCAGCTTGAATCGACCACAGACTCTATTCCAGGCCCCTGTCCGAATGAACTTTGAATATAAAGGATTTGCGGCAGCCGTCACCACCCCATCCGAATTTTACGTCATTCTCGAAGACCTGCTTTTGATTGCTGATACAGTCTCTGCCATTCTCGAGAACCTTCCCCAAGTGTTGGCGCCATTACCGGAGGTTCATTTCGTTCCTGGGGTGAGCTGTTTGGTGAAATCAGCGGAGAAGCAAAAATGGTGCAGGGCAGAGATCGTGCAGTGTGATTCCACTTCGGTGCTCATTAACTTGGTTGACTATGGTCAGTATGTCGTTCTGTCTGAACGGGATGTTGGCCAGCTAAAAAAACTCCCAGAAGAGCTCAGTAGATTACCTAAAGTCACCTACCATTGTTTACTCAGGGGAGTTAAGCCCAAAGGCCAGGACTGGTCTGATGATGCCATTGTTTTCTTCCAGAACTGTATGTGTGATGGCAACCTTCAGATACGCTTCAGACAGCATGTTTCTGAGACACAATGGGAGGTCGACATTGTCACCACTGAAAAGCAAAACCTTGCAAAAGAGCTAGTAGATGCTGATCATGCCATGTATATCGATAATATGCTTGGAATCAGGTTTCAGCAAGAGCAAGAATCAAACAGGGAATATAAACAAGACATGTCCAACAGTCCGAATGTTTTGTTCATGATAACGGAGCAAAGAAAATCCGAATGTTCTCAGCCACTTTTTTCGAAGGATCAGAAGTCATCTCAAGATTCTGTTGGGGAGCAAAACACACACCCTACGAACAGCAGTGAAGATCTCCGACCTGTAAAGAGGGAAACGCTTAGTACATCAGGTATCAAACAATGTGAGCTGATGTGAGATGGCCTATGCTTCAACAGAGATGCTGGCGAGTTATGCTCGACGTTGCACTTAAAGAACAGTCCGGCTTTGGAGCGGCtggatttaattgtttattttttgtttcagtagTGGTGTTCTCGAAGTTCGTTTGTGGAAATGAAGCATTTTGTTTGCAATACAGTGTGTTTTGTTCAAACGTAATCGTTGGAGTAAGATTTTAACcatgtttttgatttaaaaaaaagttttagaacTAAAGACTGGATTTCCAGCTTTTTTGTGCAACTGTAAATGGGCAATCAACTGATGAAATATACAGTCAGTTTATTGATTGCTTTTGGCTATGATGGCAAAGTTTCGACCAGCAAAagtttatttagtaattataaGAACTGACATTTGACCTCAGTTTGATTGTGTTGTTTgacacattttttgtgtgtgaaaatgttaACGTTTGTAGTTGTG

Function

NR:

description
tudor domain-containing protein 15-like

GO: NA

KEGG:

id description
K18405 TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218618.1 True 6165 mRNA 0.42 5 23100351 23109361

Neighbor

gene id symbol gene type direction distance location
igf2r igf2r,LOC107727636,LOC107603065,LOC107678818,LOC107743319 coding downstream 1005 23068158 ~ 23099346 (-)
slc22a2 slc22a2,LOC107678851,LOC107603093,LOC107727631,LOC107549708,LOC107697145,LOC107743318 coding downstream 32978 23062273 ~ 23067373 (-)
si:ch211-140l13.3 tcp10,LOC107603066,LOC107697070,LOC107580373 coding downstream 45611 23043100 ~ 23054740 (-)
afdna afdn,LOC107697133,LOC107678828 coding downstream 80613 22917664 ~ 23019738 (-)
snx9b snx9b,LOC107678839,LOC107726735,LOC107697144,LOC107743295,LOC107549668 coding downstream 223206 22859476 ~ 22877145 (-)
gopc gopc,LOC107727658,LOC107743304,LOC107697149,LOC107678854 coding upstream 88170 23197531 ~ 23210436 (-)
cep85l cep85l,LOC107727619,LOC107603087 coding upstream 211813 23321174 ~ 23380628 (-)
fam184ab fam184a,LOC107678849,LOC107697135 coding upstream 293709 23403070 ~ 23508544 (-)
man1a1 man1a1,LOC107727625,LOC107697158 coding upstream 518900 23628261 ~ 23724208 (-)
gja12.2 cx28.1,LOC107727590,LOC107675221,LOC107717169,LOC107598107,LOC107697092 coding upstream 727124 23836485 ~ 23840023 (-)
G141343 NA non-coding downstream 44295 23055048 ~ 23056056 (-)
G141331 LOC107726750,LOC107678830 non-coding downstream 184399 22909257 ~ 22915952 (-)
G141324 NA non-coding downstream 206336 22888520 ~ 22894015 (-)
G141319 LOC107726732,LOC107678815,LOC107697073,LOC107726733,LOC107697074,LOC107748126,LOC107553823,LOC107726734 non-coding downstream 210218 22878732 ~ 22890133 (-)
G141307 NA non-coding downstream 268930 22830914 ~ 22831421 (-)
G141370 NA non-coding upstream 85812 23195173 ~ 23196196 (-)
G141404 NA non-coding upstream 461635 23570996 ~ 23571790 (-)
G141477 NA non-coding upstream 661716 23771077 ~ 23771457 (-)
G141478 NA non-coding upstream 662156 23771517 ~ 23772116 (-)
G141479 NA non-coding upstream 665556 23774917 ~ 23781508 (-)
G140972 NA other downstream 987307 22112602 ~ 22113044 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 1253434 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 1255718 21842432 ~ 21844633 (-)
G140883 NA other downstream 1258883 21841113 ~ 21841468 (-)
batf batf,LOC107697118 other downstream 1359274 21732544 ~ 21741077 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other upstream 275210 23384571 ~ 23401391 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 676391 23785752 ~ 23823050 (-)
G141502 NA other upstream 895326 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 1145032 24254393 ~ 24517743 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other upstream 1414708 24524069 ~ 24532363 (-)

Expression


Co-expression Network