zgc:153157 (inafm2,LOC107659157,LOC107721328,LOC107562690,LOC106952300,LOC108165849)


Basic Information

Item Value
gene id zgc:153157
gene name inafm2,LOC107659157,LOC107721328,LOC107562690,LOC106952300,LOC108165849
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 14546671 ~ 14549563 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218679.1
AACACAGTTAGGGGGATTCTGACAAGATGACGTTCAGCTGTGGGCTGCCTCTATTTAGTGCGCACTAGTGAGACCCTCCTCCCTTCGTTTTCGCTCTATAGCACACTGCATAACACCGGGGCTGTCTGTATGTCCGTTCTCGTGTCATTCAGCAGATGAATCGCATCCCGGTTCAGACGTTACCGGTCATCTATTAGAGCTCCGGAAACGTCTCTGCGTGGAATAACGTTTTCGCGCTGCTGTCATGCTGGAAACGGGTCGCTATTGTGGATTTGCGAGATTGCAGGAACGATGAACGAATAAAAGCGCAGCGACGTGGTTGATCGACAAACGCTGCGTTTCAAACCCGGCAGCGGTTCGCTTGAATAATCTGTCAGTAACAGGCGTTCAAGACGGACGGCGTCCAGGAGCACAGAGGCAGGACCCGCGCGAACATGAGGGAGCGAGACTTTATGCCAAACATGGAACGGGGCAAACCGGCCACATACACGGGAgacaaaaaagctaaaatggctgctaaaaccaataaaaagtGGGTGAGACTGGCTACTGTATTCGCATATGTTTTGTCGGTGTCTTTGGCTGCTATAATACTGGCAATTTATTACAGTTTGATATGGAAACCCACGTCTGCGTCTGTGTCTGGAAGGTCAGACGTTTTTGTCCCGGCGGCAGTTATGCCCATAAACACAAATAACATCACAACAAGTGATGTACCGACTACGAACAAGACGAATAATACGCCGCCGGTCAGCCTGAGATCAACGGAGACCCCCACGTATGCCCACTCCACTTCTTCACACAGACAACGCCGGGGTGATAAAAAAGATCACGAAGGCCTTCTCAGTATcccaacagcaaaaacaaacgCTGACCAAACAGGAACATTCGACTCTGCGCACACTCACGAAAAACCAGGACGTTTCCATACAGCAGAAGTGTCGGAAACTAGTGTTCTTGTAGCAGAAGCATCCCGTGAACCTCCTTCGGTCCATGGATCCACATCTTATACTCAACAAAGCGGCAGTCAGCCCAACACGTGGGATTCAGCCTCTCCCATAACTGACCGAGCATCTTGGACAAGCTACAGTGCGAGACCTGACATCTCCTCTTTGACAGAACGTGGTCTGGAATTAATGGAGGGCTCGTCTCCATTGCAAGAGGAGTCGGTTACCAAGGACACAGAGAATGCAGCAAGTGGAGTGTGACACCAGATTATTTGCGTGGCACGTAATTATATGACATTAACTGTGATGACTCTGCAGCGAGAGAAATAACAACTGCGAGTGCGAGAGAAGAAGTACtgattttgtttctatttaaagGACAGAAACTGTGTTGACCTTCCTCCTTtgaaaagctcatttaaaagtTGTTACATTAAAGAGTGCAATAGATGGGTTCCGAAAGTAAAAtatcccattcattttctccattgAGGAATTTTTAAAGACAGACCTACTGTGAGCTACAGGGTTGTTTAGtgatgttacttttttttaaaccagcaGACTGCACTGTTTCAACTTATGTTTATTAGCAGAATTCctggtttaaaaaatacattacacatGATTTTGAAGAGAAATGTGCACCAATTAGAGAACCACATCAAGCAAATTGCCCCCAAATAAACTGTTAAAGCTAAGTATAAAGTGTTGTACCCTTTTGACtgatttgatatatatatatatatatatatatatatatatatatatatatatatattatatatttcaaatcaaGTTTGTAATGATgtgattcaaaaacattttgaaaaaatgaatgggaaaaataCTTCCAGATCCAAGGCTGCTTAAAAAATGGGCGGCACTGTGGCATAATTGAAACTCATAATACTGTATAGCCACACTCATATTCAGAATAACGGAGCAATTATGTGATATAGCTTTTATACAAAAATTCTGTAACCCTGCAATTAATATCCAACAGCTTACATTTGCAAAAATTGGCCAGTTAGTGTGTAGCTCTCTTTTCAGTGATAGTAGTTCTAAAATAAGTTATTACACGGGTAGTATACATTCACCCCTGTTTTTCTAAGTGGGGTGATAAGACAGTGACGttatactaaatataaagtCCTGGAACACTTGTTGGCAAatcaaatcaagaaaaaaaaaactaatggaTGCATAATGGATTATAAGACAATGATAATGGATTGGTTAAGCGATACGATCATGCTTCCTGAGATCTTTTGGACCAACAGGAAAATGAGCCATTCATGTCGCCAACGATGGACAAACATCCTTCTGTAgcgtttattttattgtgaagtATAATTGTGAGCAAGGtaaacactgtttaaaaattTGCCTGTAGAGTTCATGAATGCTCAGGAACGGACTATCTGTCTTAATGCAGAATACCTGGCAAGTAGGAAAAATTCACTGTGCAAACTCTCCcatgttgacattttaattaagtgTCTTTTATAAAACAGCGTGGGTTGAGCAAGatatataataactaaaatatgatgtatgaataaacaaatattttttattcagtgcaaTGATTATTAAACCAGAAACATGTCCATCTTTTGGATTATAAAGTGATTGCTTATACTAGAAAGAAAGGTGTCGTAAACAACAGATATTTATATcagtcatatattttaaatgtaaagcggtattattaataagcagtattattattaataaggcCACTTTGAAAATTCTATGAATATTGATTTTAATGATTCTGAATAAAAGAGgtatcaaatgaataaaagtataaagaattaaataatgtattattattgtatagaCTTTTTTCCtccatatttgtatatttatattttacactgaCGAGCATAATCATCCTTTTGTGccacaaaataatttatgaacAATGTCTTGTCAAAGCA

Function

symbol description
inafm2 Predicted to be integral component of membrane.

NR:

description
PREDICTED: putative protein TPRXL

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218679.1 True 2893 mRNA 0.39 1 14546671 14549563

Neighbor

gene id symbol gene type direction distance location
zbtb25 zbtb25,LOC107711665,LOC107602170,LOC107668255,LOC107721290,LOC107659158 coding downstream 13871 14528523 ~ 14532800 (-)
LOC122324587 LOC107737325,LOC107555768,LOC107556167 coding downstream 106881 14418442 ~ 14439790 (-)
LOC122324588 ccdc170 coding downstream 112871 14429428 ~ 14433800 (-)
LOC122324437 LOC103911517 coding downstream 341065 14201457 ~ 14205606 (-)
serpina10a serpina10a,LOC107659188,LOC107711658,LOC107569891,LOC107721331,LOC107665369,LOC107602246 coding downstream 353534 14188793 ~ 14193137 (-)
syndig1l syndig1l,LOC107659181,LOC107602907,LOC107562693,LOC107668242,LOC107711667 coding upstream 29884 14579447 ~ 14603338 (-)
ino80 LOC107562697,LOC107721325,LOC107659179,LOC107668207 coding upstream 193392 14742955 ~ 14777822 (-)
vps18 vps18,LOC107659178,LOC107562698,LOC107739368,LOC107602125,LOC107668247 coding upstream 229113 14778676 ~ 14784182 (-)
pigh pigh,LOC107739364,LOC107602101,LOC107668214,LOC107562701,LOC107721283,LOC107721262 coding upstream 248385 14797948 ~ 14799539 (-)
wdr21 dcaf4,wdr21,LOC107602090,LOC107659175,LOC107562700,LOC107715145 coding upstream 258970 14808533 ~ 14813502 (-)
G138562 NA non-coding downstream 21648 14524732 ~ 14525023 (-)
G138502 NA non-coding downstream 79257 14269723 ~ 14467414 (-)
G138537 NA non-coding downstream 118419 14426959 ~ 14428252 (-)
G138463 NA non-coding downstream 363511 14182209 ~ 14183160 (-)
G138415 LOC107659195,LOC107583832,LOC107659196 non-coding downstream 513215 14031165 ~ 14033456 (-)
G138579 NA non-coding upstream 29138 14578701 ~ 14578901 (-)
G138627 NA non-coding upstream 243932 14793495 ~ 14793709 (-)
LOC122324712 NA non-coding upstream 289494 14839057 ~ 14843736 (-)
G138812 ywhaqa,ywhaqb,LOC107721301,LOC107549101,LOC107756586,LOC107668239,LOC107733143 non-coding upstream 774009 15323572 ~ 15324280 (-)
G138811 NA non-coding upstream 782238 15331801 ~ 15347281 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other downstream 100746 14441533 ~ 14445925 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other downstream 348143 14193733 ~ 14198528 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 778847 13763335 ~ 13767824 (-)
G138285 LOC107555741,LOC107659217,LOC107665323 other downstream 854664 13664506 ~ 13692007 (-)
gtf2h5 gtf2h5,tf2h5,LOC107659223,LOC107721375 other downstream 998080 13547276 ~ 13548591 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other upstream 443536 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other upstream 447562 14997125 ~ 15003202 (-)
LOC122325611 NA other upstream 1292835 15842398 ~ 15842618 (-)
LOC122325617 NA other upstream 1293335 15842898 ~ 15843118 (-)
LOC122325622 NA other upstream 1293846 15843409 ~ 15843629 (-)

Expression


Co-expression Network