id2b (id2,id2b,LOC107602869,LOC107756579,LOC107549107,LOC107693236,LOC107668219,LOC107094442)


Basic Information

Item Value
gene id id2b
gene name id2,id2b,LOC107602869,LOC107756579,LOC107549107,LOC107693236,LOC107668219,LOC107094442
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15416967 ~ 15418769 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218710.1
AACGCATTGACAACAAGCTCGCAGCGCAGATCTGTGGGAGAATCGCGTGCCCCGAAATTAACCACAACGTCGTTATCCACTATGAAGGCAGTCAGTCCGATGAGGTCCGTAAGGAAGCCCGCCTTGTTTTTTTCGGAGCACAATCTCGGCATTTTACGGAGCAAGAGCTCCTCAGACGACCCGCTCAGTCTACTGTACAACATGAATGACTGCTACAGCAGGTTGAAGGAGCTCGTGCCGAGTTTACCGCAGAACAAGAGCGTGAGTAAGATGGAGATCTTGCAGCATGTCATAGACTATATCCTGGATCTTCAGATCGCACTGGACCAGAACCCGCAACAGCAGATCCTCGGACAGAGCCCTCCAAAAAAGTCCGTCAGATCGCTCGGAGCTGATATCAGCATCATCTCCTTCCAGCCCAGTAACCCTCAAAGAGAGATCAACTCAGATGACCTCATAGCCATGTCTCGTTGAAATGGTGTTTCGGTCGTGGAGCAAAAACAGgggctttttgtgttttttgttccGTGTCATTCGCCTGGACTTCGTCTTGAATGACAAAGGATTTCCCTCGAACGGACATAAAAAGAGTTAGTTATATATGGACTTTCATATTCTTTCTTCCAAAGGAAGATTCAAAAAGACTGAAGagattttaaaaggaaacagTAATTAAGCAAGCAATTTCACAAAGCAggatttttgttcttttttttctcccctcctTGCTTTTATGTTGTCAAGATGTTGCGCAAAAAGAGCGCGCATTTTACAGCTAACCCAGTTCGTCAAAAGCTGCGGACtctgtaaaaatgtacttttttgttttgttttgttttttttttctttttgctgaaaatgtgatgtttataatattacagaaaattTTATAATTCTAACGTAAATGGcacttttatactgtacataattaAATGCTAAGTATGGA

Function

symbol description
id2b Predicted to enable DNA binding activity and protein dimerization activity. Predicted to be involved in cell differentiation; circadian regulation of gene expression; and negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including cardiovascular system; liver; nervous system; notochord; and pronephric duct. Orthologous to human ID2 (inhibitor of DNA binding 2).
id2 Enables transmembrane transporter binding activity. Involved in negative regulation of DNA-binding transcription factor activity; negative regulation of transcription, DNA-templated; and regulation of G1/S transition of mitotic cell cycle. Located in cytosol and nucleus. Colocalizes with cytoplasm.

NR:

description
PREDICTED: DNA-binding protein inhibitor ID-2-like

GO:

id name namespace
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003677 DNA binding molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218710.1 True 946 mRNA 0.42 3 15416967 15418769

Neighbor

gene id symbol gene type direction distance location
e2f6 LOC107549105,LOC107721299,LOC107693241,LOC107668234,LOC107756581 coding downstream 46937 15365958 ~ 15370030 (-)
cpsf3 cpsf3,LOC107693240,LOC107549104,LOC107756584,LOC107668237,LOC107601862 coding downstream 67746 15343944 ~ 15349221 (-)
taf1b LOC107575862 coding downstream 109684 15302806 ~ 15307283 (-)
klf11a klf11,klf11a,LOC107549098,LOC107693793,LOC107668260,LOC107756587,LOC107601876 coding downstream 119059 15294518 ~ 15297908 (-)
LOC122324271 rrm2,LOC107668265,LOC107549099,LOC107756588 coding downstream 124712 15288771 ~ 15292255 (-)
rnf144ab rnf144ab,LOC107693234,LOC107721372,LOC107601775,LOC107668259,LOC107549108 coding upstream 19968 15438737 ~ 15452011 (-)
sox11b LOC107693233,LOC107549109,LOC107721294,LOC107601767,LOC107756575,LOC107668258 coding upstream 100441 15519210 ~ 15521783 (-)
LOC122325442 rps7,LOC107668222,LOC107726469,LOC107601753 coding upstream 423434 15842203 ~ 15845477 (-)
LOC122324514 rps7,LOC107668222,LOC107726469,LOC107601753 coding upstream 500815 15919584 ~ 15922857 (-)
LOC122325615 NA coding upstream 501011 15919780 ~ 15920000 (-)
G138828 NA non-coding downstream 35998 15370608 ~ 15380969 (-)
G138811 NA non-coding downstream 69686 15331801 ~ 15347281 (-)
G138812 ywhaqa,ywhaqb,LOC107721301,LOC107549101,LOC107756586,LOC107668239,LOC107733143 non-coding downstream 92687 15323572 ~ 15324280 (-)
LOC122324712 NA non-coding downstream 573231 14839057 ~ 14843736 (-)
G138627 NA non-coding downstream 623258 14793495 ~ 14793709 (-)
G138853 NA non-coding upstream 98074 15516843 ~ 15517070 (-)
G138862 NA non-coding upstream 265407 15684176 ~ 15711053 (-)
LOC122325621 NA non-coding upstream 303277 15722046 ~ 15722265 (-)
LOC122325623 NA non-coding upstream 303781 15722550 ~ 15722769 (-)
LOC122325616 NA non-coding upstream 304294 15723063 ~ 15723283 (-)
srsf5b srsf5b,srsf5,LOC107549086,LOC107721313,LOC107756601,LOC108233477,LOC107602033,LOC103029514 other downstream 401698 14993099 ~ 15015269 (-)
max max,LOC107668248,LOC107671780,LOC107721316,LOC107602050,LOC107756603 other downstream 413765 14997125 ~ 15003202 (-)
LOC122324589 armt1,LOC107721382,LOC107737326,LOC107555770,LOC107556129 other downstream 971042 14441533 ~ 14445925 (-)
prph2lb prph2l,LOC107569893,LOC107665408,LOC107711660,LOC107721267,LOC107602225,LOC108424527 other downstream 1218439 14193733 ~ 14198528 (-)
stx11b.2 stx11b.1,LOC107721286,LOC107659169,LOC107577278,LOC107665416,LOC107556141,LOC107711623,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 other downstream 1649143 13763335 ~ 13767824 (-)
LOC122325611 NA other upstream 423629 15842398 ~ 15842618 (-)
LOC122325617 NA other upstream 424129 15842898 ~ 15843118 (-)
LOC122325622 NA other upstream 424640 15843409 ~ 15843629 (-)
LOC122325613 NA other upstream 425585 15844354 ~ 15844574 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other upstream 571380 15990149 ~ 15993645 (-)

Expression


Co-expression Network