LOC122324391 (LOC107712205,LOC107564326,LOC107659794)


Basic Information

Item Value
gene id LOC122324391
gene name LOC107712205,LOC107564326,LOC107659794
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25944134 ~ 25959702 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218762.1
TccaatagttgtatctcagagaAATACtcagttaaaaacaaacactgccaTTAAGAGATTTTATGATCCACgttattctttgttttatttcaagtgACAATCTTTTGCTGTGGTTTTAGTTAATAACAGTCATCAGCTGTAATCATGAATGAAGATCTTCACCTCTCGGGGCGTGTCCTCGTGACGCTCATGAATATGTAATCAGGGCGACGCGTCACAGCGGCCAATCAGACGTGAGCGTGCTGGAGTCCCGCGCGGAGTTTTCTCGGACTTCTTCTCCTCTCTGGAGCGAATGAAGACCGGACTCTGAGGGACATGGAGGCGTTCGCCATCAAGAGCCGCCTCAGGAGCCTCCTGCGCTCGCCGTCCATCAAACTCAGGAAGAACCGCCATAAAGAGAGTCTCTCCGGAAAGGTGACTCTAGAGAAGGTTCTGGGCATCACGACCGCAGGAAACAGTGGTTTAACATGTGATCCGTGTTCAGGAACCGTGGCCTATCCGGCCGGGTGTGTGGTTGTGTTACTGAACCCGgccaaaaacacacagcagcatCTCATCAACTCGTCCAGGAAGGCCATCAGTGCTCTGGCGTTCTCGTCGGACGGCCGGTATCTGGTCACTGGAGAGagcgGTCACCAGGcggcggtgtgtgtgtgggacgtGAGCGAGGGCTCTCTGGTCTCGGAGCTGATGGAGCACAAGTACGGCGTGTCCTGTGTGGCCTTCTCCCCGAACGACAAACACATCGTGAGCGTCGGGTCGCAGCATGACATGAGCGTCCATCTGTGGGCCTGGAAGAAGAACGCTCTGATAGCCGTGAATAAAGTGTCCAGTAAAGTGACGTCCGTGTCCTTCTCCGAGGACGGCAATCATTTTGTGACGGCGGGGAACAGACACGTGCGCTTCTGGTATCTAGAACCGTCTCACGCCGATCAGCGGGCGTGTCCGGTGCCTCTGACGGGTCGCTCCGGGCTCCTCGGGGAGCTGCACAATAACTTCTTCTGTGCCGTGGCGTGTGGACGGGGATCGAGGTCCAGCAGCACCTTCTGCGTCACGGCGTCCGGACTGCTCTGTGAGTTCAACAGACACCGGGTCCTGGACCGCTGGGTCCATCTACAGacggGTTCTGCTCACTCTCTGGCCGTGACGGAGGACCTGATCTTCTGCGCGTGTTCGAGTGGAGTCGTGCGAGTGTTTGGAGCGTCTGACCTGAGCTTCATCTGCACCCTGCCCCGTCCTCATCACCTGGGCACCGACGTCTCCAGCGTCACACACGCCGGTCATCTGTTCAGCAGAAGCCTGCACGCCCGATACCCAGCCTCGGTGGcggtgacctttgaccccgtCCACCGCTGGCTGTCCTGTGTGTATGATGACCACAGCTTATACGTGTGGGACACACGAGACCTGTGCAAAGTGGGCAAAGTTCACTCGGCGCTGTATCACTCGGCCGGTGTCTGGGATCTACAGcatgtttgtgATCTGCTCAAACTCCAGACGTGTTCTAGGAGCAGCGAGGGCTCTGCTTCGTTCCTCACGTGTTCTTCAGACGGCTCCGTGCGTTTCTGGACTTCAGACGGTCTTCGCTGCAGGAACGTCTTGAGTAACGATCTTCATCACATCTTCTACGTGAACGCCAGTGCTCTGCCGGAGACGGAGGGAACGGCCGAGGGATCTAGCTCAATCAGAACCATCTGCATCAGTCCAGACGGGAGACACCTGGCGTCTGGAGACAGAAACGGCACACTCAGGATTCATGATCTCAAGTGTATGAAGGAGCTGCTGAAGGCAGAAGTCCATAACTCTGAGATTGTGTGTCTGGAATACTCCAAACCTGCgtcaggcATGAATCTGCTGGTCACTGCGGGTCGAGATCGTCTGATCCGTGTTCTGGATGCTGATGAAGACTACGGTCTGCTGCAGACGCTGGATGATCACTCGTCCTCCGTCACGTCCGTGCGCTTCGCCGCCGGAGGAGACGGGAAGCTGCGGATCATCAGCTGCGGAGCGGATAAGAGCGTTTACATCCACACCGCTCTCAGGACGGCCAGAGGAGCTGAGTTCAAGCGGACTCATCATGTGGTTCGTAAAGCGACTCCCAACGACATGGACGTGGATCCCACGTGTAAATACGCGGCCGTCGGCTGTCAGGACCACAGCATCCGAGTCTTCAACATCAGCAGCGGCAAACAGAAGAGATGCTTCAGCGGCGCTCGGACCGAAGACGGAGCTTTTCTGAAGGTTCAGATTGACCCGTCAGGTCTGTTTGTAGCCTCCAGCTGCTCTGAGAAGAACATCAGTCTGATTGACCTCCAGACCGGAGAGAGACTGGCCAGCGCCTTCGGACACTCGGAGCTCATCACAGCTTTGAGGTTCAGCAGTGACTGCAGGCACCTTCTCTCCTCTTCTGCTGACAGTTGTATCTTTGTGTGGCGTCTCGCTCCTGAACTCACCATCAACATGAAGGAGAGACTTTCTGTGATCAGACACAGTCGCGGCGCATCAAGCGCTAGGAATCCCTTCAGacGGTCCTCCGTGACTGGGTTCATGCTGCACAGATCCACATCCATCATGAGCTGCTCGTCTGAGAGTGAccgagaggaagaggaggaggaggaagaggaggaagacaTGAGGACAGCTGAAGAGACGGAGAGACCGGAGGACATCCACCAGAGGACCGAGGACAGCGTTGATGAGGAGACCGGTGGATCTGATGAAATGCACTGGCGTCCAGTGAAGGCTGCGTCTTCAGACTCGTCTTCTTCTGCGGTGGTGTCTCGTCCTCGCCGGCGCTGGTCCTGTCGCGTGGGCTCTCTGGAGCTCATGGTGAAGTCCATGCTGGAGCTCAGACAGCTGGATTCTCTCTCAGAAGCTCCAGATCAGAGCAGAAGCTGCGCAGACCGTCTGCGTGACGAGGATCGATGCAGCACTTCCAGTCTGCAGGATTGTCGTCTCCGTCGTCCTCGTCGCTCGGCCTGGCTGCTCCCGGCCGGCGCTCCTGAACCCGAGGGAGTGCTTCTGTACCCGGATCACTGTCCCAGCACCAGCAGTCTGCCCGGGACGTCCTACCAGATACAGACTCGGTCTGAGAGCCTCAAGGAGAGAGCAGAAGAAGCCCAGAGTCCTGTCAGCGGAGCATCCATGGGCTACTGCAGCGGAGGATCCAGCCCAGACCCCCGGCACCTCGACACGGGCTCTGATGAAGAATCCTGTGACACACGGTCCATCTGTGGTTCTGAGAGTGTTCCTGAAGACGTCTGGAGGAGCTCGGAGACGCTGAGCGATGCAGGGTCTCAGACCACAGCAGAAGGAAGTTTCTCTTCAGGTTTGCACGGCCAGAAGTTCTCTAGCAGATCAGTCAGCGGCCCCGGGCCCCTGAGGAGCCACCCGTACCTGAGCAGCTCTGCGGCTGGGCTCCAGAAGTCAGCTTCAGCACACAGCCGGAGCCACGAGCGCAGGTCCCTGGCGCGTCCGGTCCGGTCCAGACTGAGTCTGGAGAAGGTGGAGAGCCGCTCCTACATGAGTCCCACCACCAGCTCCAAGGCCAAAGCCAGCCGTCCCTGTGAGAGCCTGAGCGTCCTGACCAGCAGACCCCCCCGCACGCCGCCTCAGGAGCCCTGGACCGACCCCagctcttcatcatcatcatcatcctcctcctcggCGATGAAGACGCCTGCCGCTCCTGATGATGAAGGTGTGAAGCGCCGGCGCTCTTCCTCCGTCCTGCTGCTGTCTGTGCCActgcttcttcctcttcctcactcGTCTGGTCTCCTTCCTCTCTGCTTCTCtcccttcttctctctctccttcggCCGGCGGCGTGACTCGGATGGGTCGGTCAGTCTGGAGCTCTGCCGGCGGGCAGCAGAGGACCTGTGCAGCAGCGTGAGGTCAGCGACCCGGATCTACAGGACGCTGAGCTCCCATGATGCCGAGCGCAGCGCCGAGCAGCAGCAGATGTGTCAGCTGATGTCCGAGGCTCTGCTGCTGGTGCGCTCGGAGCTGGACTCGGTGTCCGGACCCCAGAGGAGAGAAGAGGGACACGAGACGCTCGCTTTACTCGAGCAGTACTCACAACTACTGCTGCGCTCCGTCGAGAAGAGACTCCACCAGAACACATAGAGCTACCACACCgctgagagagagtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

NR:

description
PREDICTED: mitogen-activated protein kinase-binding protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218762.1 True 4255 mRNA 0.58 30 25944134 25959702

Neighbor

gene id symbol gene type direction distance location
pak5 pak5,LOC107659820,LOC107731598 coding downstream 9062 25888169 ~ 25935072 (-)
LOC122325519 plcb1,LOC107663155,LOC108423552,LOC103033987,LOC107678738,LOC107728323 coding downstream 167971 25754500 ~ 25776163 (-)
trnas-gcu_30 NA coding downstream 310191 25633860 ~ 25633943 (-)
LOC122325306 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding downstream 313199 25626652 ~ 25630935 (-)
hsp90aa1.1 hsp90aa1.1,LOC107704377,LOC107557012,LOC107564585,LOC103024454,LOC106533044 coding downstream 328858 25609316 ~ 25615276 (-)
magl NA coding upstream 4281 25963983 ~ 25976828 (-)
lrfn5b lrfn5b,LOC107659815,LOC107564320,LOC107712211,LOC108411613,LOC108257655 coding upstream 76692 26036394 ~ 26049767 (-)
znf410 LOC107659809,LOC107712212,LOC107550151 coding upstream 112703 26072405 ~ 26079546 (-)
cipcb NA coding upstream 123387 26083089 ~ 26087970 (-)
LOC122324579 LOC107756053,LOC107659807,LOC107756058,LOC107659806 coding upstream 141631 26101333 ~ 26103223 (-)
G142201 plcb4,LOC107557901,LOC106608066,LOC107659823,LOC107564330 non-coding downstream 79055 25838372 ~ 25865079 (-)
G142015 NA non-coding downstream 347322 25474206 ~ 25596812 (-)
G142042 NA non-coding downstream 364873 25514247 ~ 25579261 (-)
G142016 NA non-coding downstream 416173 25523201 ~ 25527961 (-)
G142026 NA non-coding downstream 484902 25457409 ~ 25459232 (-)
G142260 NA non-coding upstream 46567 26006269 ~ 26010388 (-)
G142261 NA non-coding upstream 50948 26010650 ~ 26012248 (-)
G142245 NA non-coding upstream 57669 26017371 ~ 26033198 (-)
G142242 NA non-coding upstream 59017 26018719 ~ 26055565 (-)
G142247 NA non-coding upstream 61785 26021487 ~ 26077073 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 190126 25747667 ~ 25754008 (-)
G142058 NA other downstream 294041 25648492 ~ 25650093 (-)
mettl24 LOC107738893 other downstream 535359 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 566718 25326508 ~ 25377416 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 1092355 24838652 ~ 24851779 (-)
LOC122324466 samd15 other upstream 91127 26050829 ~ 26054469 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other upstream 128713 26088415 ~ 26096971 (-)
G142281 NA other upstream 225958 26185660 ~ 26187919 (-)
G142278 NA other upstream 272322 26232024 ~ 26234245 (-)
rps29 NA other upstream 523619 26483321 ~ 26560387 (-)

Expression


Co-expression Network