kcnk3a (kcnk3,kcnk3a,LOC107562302,LOC107685790,LOC107574791)


Basic Information

Item Value
gene id kcnk3a
gene name kcnk3,kcnk3a,LOC107562302,LOC107685790,LOC107574791
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5416749 ~ 5431038 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218786.1
TCGTGTTACGTTTGAAAATGTCTCTATAATGCGaccattataatgatttctgcaTTCGATCATTCGTTCGCCCGATATGTTTTGCAATCCTGTTTTCACGTGGCGGTGGATTTTTAATCTTCTCGTCAGTTAGCTGCTGAAGCTCGATCATCTCCACCGTGGTGATGTCACGCAAATGCATTTATGAGCCGCTGTGGCGTTCGATCGATCTTATATGTCCCGCTTTTTCGGAACCCAGCCTATTTAAAACCCTCGGCTTGCTGTCGCTCAATCTTCAGTGTGTTTTGTACCGATGGGAGGTTGCGAAGATGAAGCAGTGAGATGAGATGTGTCGACTCAACAGGCACATGTGCACCCGTGGTGCTGAAGGAACAGCTCAGTGTGCCCCGTCGCAATGAAACAGCCCTCAGTCCTCAAAGTTTGCGGCTCGCTTCATTCGCTCTGACCATGAAGAGACAAAACATCAGGACCCTCGTCTTAATCATCTGCACTTTCACTTATTTGCTCGTCGGGGCGGCTGTTTTTGACGCTTTAGAGTCTAAGATGGAGATCACCCAAAAGAAGATCCTGGACGATCGGAAGCGAGAGCTAATGGACAAGTACAACTTGAGCAAAGTGAATTTCGACGAGCTGGAGCGGGTCGTGCTGCAGCTGAAGCCGCACAAGGCTGGGGTCCAGTGGAGGTTCGCCGGCTCCTTTTACTTCGCCATCACGGTCATTACCACCATAGGATATGGCCATGCAGCCCCAAGCACAGATGGTGGAAAGGTGTTCTGCATGTTCTACGCTCTCCTGGGGATCCCCCTCACCCTGGTCATGTTCCAGAGTCTGGGTGAACGCATCAACACCTTCGTCAAGTACCTGTTGCACCGTCTCAAAAAGTGTCTTGGCCTTCGGAACACAGAGGTCTCGATGGCCAACATGGTGTGCATTGGCTTGATATCCTGCATGAGCACCTTGTGTGTGGGAGCAGCGGCTTTTTCCCGCTACGAAGACTGGAGCTTCTTCCATGCGTACTATTACTGCTTCATAACCCTCACCACCATTGGTTTCGGGGACTACGTAGCCCTTCAGAAAGATAACGCGTTACAAACCAACCCCCAATACGTGGCGTTTAGCTTCATGTACATCCTCACGGGACTCACGGTCATCGGCGCCTTCCTGAACCTGGTGGTTCTGCGCTTCATGACCATGAACGCCGAGGACGAACGGCGCGACGCCGAGCAGCGTACGTTGCTGTCGCGAAACAGGCAGAGCGGAGGCGCCGGAACCAACCACTGCATGTCCGAACCGCCGTCTTCATCCGCCGCGGGCCACGCAGGAGGCTCCGGGAAAGGCTTGTGTAACGTCTATGCCGAAGTGCTGCATTTCCAGTCCATGTGCTCTTGCCTCTGGTACAAAAGCCAGGAGAAGATGCGCTACTCGATTCCCATGATCATCTCCCACGACCTGTCCACTTCAGATACCTACATGGAGCACAGCGAGGCCTCCGACGCCCTCCACTCCAACGGCTGCGTGTGCAGTGCCTTGCAGGAGCACTCAGCCACCAGTTCTGTGTACACGGGCCTGCTCAGCCCGGCACATTACCAAAGACTCTCCAAACGCCGCAGCTCCATCTAGAGGGCTGGAGGATGTATTGCATGTGAATCTCTTTCGCCTTACGGAACCAACCACTGTTATACTtggggttgaaaaaaaaaacgctgctTCTAAGCTGCTCAGATCCTCTGTCAGTCGAATATATGTAATGTAGTGATAGACGGGGCAGGGCGGCCTGTCAGCAGGTGCTGCTTGAGGACCGGAGACGTAGCAGCGTGCAATAAAAACAGGGTGAAGCCTGTATCATTTGAGCTAGACTTTGGGGATTTCCATAAAAGACAAAACTCAAACTGCTAGCTCTTTGCTGGGCTCAAGGGTAAATAGAAACAAATGCAGGTCTTTCGAAACCAACAAGTCCCAAAGTGTCAGGCTCTTCTGGTTTTGATTTGAATAGATAGTTCTCGTGATGCAACCGTTTCTACAGTGAATACTTTATTATCTTTCCAGGAGTTAtcatagtaattaaaaaaaggaaaaaaaaaatatatgtatatcaaacaattattttatatgagaAATTTACTAATGATTAGTATAGACCTAGTCAGGGAAGAGCcgtatttaatttttgatagGAGTAGAGTGCTGAAGTGATGACGTATTTTTTGTAGGCCAACCTGAAGCTTAGCTGGTTCCCTTGAAATGTTGTTCATCGTGATGTTCTTCACAAATTATACAACATTTTTGAGACCTAAATATCATCAGAAGCGTAAAAAAACATAGGCTTCAAATGATGTCACCACCAATAAGTGTCCcgtttctttgtttaaaaaaacgctTTCCTTGAAGGTTTGAATCTAAATAGTTAAACGTAACATAACCACTAATGGCAGATGAAGCAGTCAGACGACGTCTTTTatacagtcacaagcctcctggttttcatccaaaacatcttaaattgtgttccagaGAAGAACAAAGCTTTACGGCTTTGGAACGGCAcgagggtaagtgattaatgacaaaattgtaatttgcgGAGGAGTAACCCTTCAAccaaaaaccataaaaaaaaaattgtctttagAACCGTGCAACAGGAAGTCTTAACATTTCAGgttttggcctacaaaaatatGTCATCCCTTCAGCGGTCTATGAAAACAAGGCTGTGAGGGATAGAGGTACAGTGTGCTTAATGGATTGTAATGCAACAGTGGCGATTGGCCGCTGATGAAATACAGTTTCAATAATTGTGAGTTATGAAAAGGTCCACATATCCTGCACAGCCTTGCTTACATCCCTGTCAAATTTATTATGGCGTCTCGGCTGACTAAGGTTTATCGACTTTTCTTCAACACTCAAAGCTCACATACACAATGAACTGTATTGTTCATCTATCCACGTGTGCCccttttctgtatttatatccACTGTTATTTTAATCCATCACCATGTTTGTCTGAATAACTATTTGTTTGCATCATAGCAACTGTAACATctcattgttttaaattatactggattatataattatgtagGACTATATTGTACTTGCAGTTGCACTTTAGATGAAAAACATTAGCTTCAGGGCTTTAGCCACGAGTGCACAGAGTATCTCTTGAAACATGAAAtcttcttaaaatacatttctggtCTTGCAGTGCACAATTCATcatgttatttcaaaaaaaGGAAACGTTTTTGTAAACTTTGgttaagatttaaataaattaaaacttcttaaataaattaaaaaacccAAGCCAAGCTAtagttttttaaacaataaaaccaaaaaaacattcaaacactTTTGTTGGTAACctctttataaaatattttgaaatagttaATGAGGCGGTTTAATgatgattaataaatgttacagCAATAGCAGCAAATATCTCAAAAATCTAAATCCCTTCACCAAAGGTtgccctgcagtgaatgggtgccgttaggGAATGACAGTCCAAACAgctacattacaataatccacttGACTCCAGTCCATCTGACATCTTGAGAAGTGGAAAGCTGTGTGTTTCTAAAGCAACTCCATCAAGGCATAGACATTatctgatggactggagtggcgtggattactgtgtttttatcagctatttaaaaactcattctgacagcacccattcaccgcagaggatccattgctgagcaagGGATGTAACGTTTTTTGCGATAATCTACATCCAAGAAGGCCTAAAGGGGAATACATTTTCAGCTGATTTTCATTGTGGGTGAAGTTTGAACATGACCAGCCTCTACATCTCAAGTTCTCCATTCGGCTTACGGGACTTCACAATTGAAATTTtcgataaacaaaataatttcattGCGTATGCTATTAACAGATGAACAGCAATGTTtgtattacatgtttttttgtcagtacACACAACTTGTATTCCTTGTATTGACTGCATTAGGTCTGAAAGTGTTGGTATTTGAAGACCGACTAAATTGGACATTTTTTAGAAGGCACGTTTAGTATAGTTACGTTCCTAAAGCCGTATATTTAAGGGCACGGTGGGCTCCCGTAAAACCGCACTTTTAAAATCCAATACTAAATATAACATCACTAATTATTAGTTAAACTTTACTTCAATGCTTGTACTATTTTAACATTGTGTGCATTAGTTTAGAGCAACTAATCGAAATCTCCTTCCAATGGCCTTTGGCAACCGTTTTCTAATCTAAACTCATGTGCTTAGCAAGATTTGGAAATCCAAAGTGGAATAAAACGTTCATATAGATCATGCGGGCCTGTCATTTCTCAACGTAACTTACTTAGAAATGTCAAACGTGCTTGTTGTTGCTACTTTTAGCACAAATATAATCTAAGCAATACGCCAGGAGATCATGTGTAAACGTTTATCGTATTAGCGTCCTAGTTTCACATAGCTACATATTACGATATCAGTAATCCAACATTCGGTGCTCGTCGCGTCACGTTTATGAAAACAAGTTTGATATTGTTTGCTGGGTGCCTTAGATTGCTAAAACTCTTTGATCCAAAATGTACAACTTGCACATCGCATGATAGAACTGCGTAATAGAAAATTCTGCCTTGATCCCGTTCGTTCTTTCTTGCGCTGTAAATCAAAGAGCGTCCCTGCTAATGTTACTCTACCTCAGAGGGTTGAGTCAGAGTGGGTTTTTCCCGTCTCCTTCATCTCCCTTTCGCTtgcaaaaatggaaagaaaaaaaaaaaaaaagaagttgccCCTTCTCAGCAAAGTTGTCAGTTCAGATCATCTTCATCCAAGCCTCTCTTTCTATTTGGGAATGAAGCTGCATAATATGTCCACCTAGGGGCAAAGAAAGTATTTGACAAGTGGTTTGGCtgagggcacacacacacacacacacatcaaagcTAAgaactgtgtgttttgtgtgcatgtatagAAATTTCAGTTCGGTTTTCATTTCTTTCGCCACTTTATCCACTGCTGTGCTTTTAGCAGTCGTAGGGAGGGAGTAGATTATAACCtactgaaataaattcatgtttttaaatccCGCTTCATTGTAAAGAGTCTTGATATTGTTGCCCTTCTGTTCTCAAAGAATTCTCGCTGAGTTGATTGTGTTTAAACGTTCATCTGAAAGGGGCTCGATAAATGCCATTCTTAAgggatgtatttttaaaataccgtaattattgtattttgcaATTATAAACTGATGTCCCAGCTGTCTGTTCAATAAATATCTGATGTTAAA

Function

symbol description
kcnk3a Predicted to enable potassium ion leak channel activity. Acts upstream of or within heart contraction. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in atrium; cardiac ventricle; central nervous system; and heart. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Orthologous to human KCNK3 (potassium two pore domain channel subfamily K member 3).
kcnk3 Enables S100 protein binding activity and potassium ion leak channel activity. Involved in ion transmembrane transport. Located in plasma membrane. Implicated in primary pulmonary hypertension.

NR:

description
potassium channel subfamily K member 3-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005252 open rectifier potassium channel activity molecular_function

KEGG:

id description
K04914 KCNK3, K2P3.1; potassium channel subfamily K member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218786.1 True 5292 mRNA 0.42 2 5416749 5431038

Neighbor

gene id symbol gene type direction distance location
ints7 ints7,LOC107685756,LOC107659878 coding downstream 31569 5375953 ~ 5385180 (-)
c20h1orf131 LOC107727347,LOC107685755 coding downstream 295265 5115848 ~ 5121484 (-)
sprtn sprtn,LOC107685751,LOC107727344,LOC107679685,LOC107742220,LOC107548399,LOC107733995 coding downstream 344594 5066615 ~ 5072155 (-)
fam89a fam89a,LOC107727345,LOC107742210,LOC107685750,LOC107679680 coding downstream 352322 5060707 ~ 5064427 (-)
ttc13 ttc13,LOC107679664,LOC106571397 coding downstream 364314 5034349 ~ 5052435 (-)
LOC122324477 ezrb,ezr,LOC107685759,LOC107745284,LOC107549516,LOC107733309,LOC107659875,LOC106607585 coding upstream 48636 5479674 ~ 5502647 (-)
rsph3 rsph3,LOC107562297 coding upstream 73218 5504256 ~ 5514040 (-)
tagapb tagapb,LOC107685761,LOC107745285,LOC107733310,LOC107667698,LOC107549517,LOC107562296 coding upstream 89108 5520146 ~ 5537376 (-)
trnal-caa_1 NA coding upstream 111239 5542277 ~ 5542388 (-)
trnal-caa_2 NA coding upstream 112252 5543290 ~ 5543401 (-)
G136188 NA non-coding downstream 296983 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 319688 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 382945 5033599 ~ 5033804 (-)
G136175 NA non-coding downstream 397883 5018361 ~ 5018866 (-)
G136069 NA non-coding downstream 679943 4736549 ~ 4736806 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding upstream 221261 5652299 ~ 5652925 (-)
G136356 NA non-coding upstream 270143 5701181 ~ 5701475 (-)
G136368 NA non-coding upstream 428915 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 617930 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 697460 6128498 ~ 6145661 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 56680 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 387182 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 404169 5011381 ~ 5012580 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 834652 4564356 ~ 4582097 (-)
LOC122325550 NA other downstream 1441491 3968763 ~ 3975258 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other upstream 160300 5591338 ~ 5598666 (-)
G136357 NA other upstream 270641 5701679 ~ 5703911 (-)
zpax2 NA other upstream 493028 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 843716 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 979924 6410962 ~ 6414013 (-)

Expression


Co-expression Network