mep1a.1 (mep1a.1,LOC107696105,LOC107601486,LOC107719100)


Basic Information

Item Value
gene id mep1a.1
gene name mep1a.1,LOC107696105,LOC107601486,LOC107719100
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18332510 ~ 18337181 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218834.1
AAAGTTCTCTTTATGCTATTTAAGCGATGGCAATTTCTTATACCGCACATATTGACAGGATGCTCTTACTGAGGCTACTCATCTTTACAGTGCTGGCTGCAGCACTTCATgctATTCCCGTTTCAACCCGCATTCATgAGGTTGAAGATGAACCCAATGTCAACCCTTTCATCAATCTTGgAGCAAAAACCAAGCTGGTTGAGGGAGACATTGCCATACCtCCTGGTCGTGTTGGTCTTATTGACACAGCATACAGATGGAAGTTCCCTATTCCATACATTCTGTCTGACAGCCTGGacCTTAATGCAAAAGGTGCTGTTTATCAAGCGTTTGAAATGTACCGTCTAAAGTCCTGTGTCGATTTCAAACCCTACGAGGGCGAGAAGACTTTCATCAAATTTGAGAAGAGAGACGGGTGCTGGTCTTATGTTGGAGATCTACAGACTGGACAGGTGCTTTCTCTAGGGCCGGGTTGTGATCATAAGGCCGTGATTGAGCATGAATTGCTGCATGCCCTGGGCTTTTACCATACACAGTCTCGCCAGGACCGAGATGACTATGTGAAGATCTGGCTAGATCAGGTCACTGAAGgcaTGGAGCATAACTTCAACAAATATGATGATGGTTTTGTCACAGATCTAAATACTCCGTATGACTACGAATCTGTCATGCATTATCGCCCATTCGCTTTCAACAAAGACCCCAGTATTCCTACCATCACCACCAACATCCCAGAGTTCTTCAACATCATAGGGCAATACCTGGACTTTAGTGAGATGGATATTGTCAGACTGAATCGAATGTACAACTGctCCTCTTCTCTTACCCTGCTGGACCAGTGTGTTTTTGAGAACATAAACATTTGTGGGATGATACAGAGTTTATCTGACGATGCTGATTGGGTCCATCTGAAAAGCTCTCCTGGTGCCGAAGATCATACACTCAGTGGACAATGCAGAGATTTAGGATATACTATGCACTTCGACACCTCCACTGGAAATGCTGAGCAATCAGCTCTCATCGAGTCGCGCATCCTGTATCCTAAGAGGAAGACACAGTGCCTCCAGTTTTTCTACAAAATGACAGGAAGCGTAAAGGACAAGCTAGTCATTTGGGCCAAGATGGATGATGGAACAGGAACCGTGCGTAAATTAAAGAAACTCCACACAATCCTTGCCGATGAAGACAAAACATGGAAGATTGGTCATGTGCCTATGCAAATAGGAGCAAAGTTCCGCTATTCATTCCAGGGAGTAAGAGGAGACCCTGGTAACTCTGAAGGGGGCATATTCATTGATGACATCAGTCTGGCAGAGACGCACTGCCCTGCCGCTGTCTGGCGCATCCAGAACTTCTCCAGGATCTTGGAAACAGCAGACTACAACACCGTGCTAAACAGCCCTCGTTTCTACAGCCCGGAGGGTTACGGTTTTGGCGTTCAAGTACGACCAGTGTCTGGTTACTCTGATTACACGGGCAACTACACTGGTCTGTATTTTCATCTGGCCAGCGGTGACAATGACATCGTGATGCAGTGGCCTGCCGTGAACCGCCAGGCCACCATTGTGGTGATGGACCAGGATCCAGACATCAAGCTGAGGATGTCCTCTGCTCGTAGCCTCACCACTGACATGAGCACAGTCAGTGGAGACAAACTAATATGGGACAATCCAAGAAATGATGGGACCTTTGACCCAAGTTGTGGGTGTTATCGAGGAGATTCAGTGGGGTGGAGAAGTTTCATAAAACACTATGACCTACGCAGACGGAATTACCTGAAAAACGATGACCTTATCATCTTTGTTGACTTCGAGGACTTAACAAGTCTGATAAACAGTGAAGTTCCAGTTGAGCAAAAGGTTTGAGGCCAAGAAGTCTGTGGATTTGGAAAAGTCTGAAGAGAGAAAGCTGTGTGCATTGTGgacaacattatttaaaatggaagcCTGATTGTCAGAGATGCAAAACTGTGCTTGATATACTCATTCTATACATTCTCAATAAAGCCATTTTAATGCAGTGAA

Function

symbol description
mep1a.1 Predicted to enable metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brush border epithelial cell; digestive system; epidermis; gill; and heart. Orthologous to human MEP1A (meprin A subunit alpha).

NR:

description
PREDICTED: meprin A subunit alpha-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218834.1 True 2024 mRNA 0.46 14 18332510 18337181
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Neighbor

gene id symbol gene type direction distance location
tdrd6 LOC107732403,LOC107698349,LOC107719088,LOC107696190 coding upstream 6642 18316265 ~ 18325868 (+)
sf3b6 SF3B6,sf3b6,pm14 coding upstream 16867 18314094 ~ 18315643 (+)
vsnl1a vsnl1a,LOC103379314,LOC107378186,LOC102798040,LOC103457788,LOC107553484,LOC100696968,LOC101471140 coding upstream 20681 18290482 ~ 18311829 (+)
fam49a znf395,fam49a,LOC107553485,LOC107696187,LOC108440968,LOC106571599 coding upstream 78586 18235339 ~ 18253924 (+)
fbxo16 fbxo16,LOC107599067,LOC107696103,LOC100150082,LOC107553487 coding upstream 97572 18231586 ~ 18234938 (+)
mep1a.2 mep1a.2,LOC107719099,LOC107696095,LOC107601466 coding downstream 759 18337940 ~ 18343748 (+)
LOC122324770 LOC107698347,LOC107732411,LOC107690037 coding downstream 140128 18477309 ~ 18507902 (+)
opn5 opn5,LOC107732377,LOC107732532,LOC107553443,LOC107698323,LOC107601485,LOC107690038 coding downstream 178044 18515225 ~ 18526381 (+)
ephx1 ephx1,LOC107553477,LOC107732537,LOC107601524 coding downstream 423248 18760429 ~ 18764704 (+)
ncoa1 ncoa1,LOC107727606,LOC107710951,LOC107675037 coding downstream 448872 18786053 ~ 18829653 (+)
LOC122325341 NA non-coding upstream 43772 18281203 ~ 18288738 (+)
G139495 fzd3a,LOC107732395 non-coding upstream 110789 18217732 ~ 18221721 (+)
LOC122325323 NA non-coding upstream 188322 18131920 ~ 18144188 (+)
LOC122325324 NA non-coding upstream 189688 18141785 ~ 18142822 (+)
G139376 NA non-coding upstream 719093 17613206 ~ 17613417 (+)
G139514 LOC107601531,LOC107719104,LOC107683599,LOC107571298 non-coding downstream 18120 18355301 ~ 18370588 (+)
G139518 NA non-coding downstream 35228 18372409 ~ 18379016 (+)
G139520 LOC107696192,LOC107708867,LOC107601464 non-coding downstream 42024 18379205 ~ 18391195 (+)
G139543 NA non-coding downstream 111838 18449019 ~ 18449430 (+)
LOC122324773 NA non-coding downstream 130814 18467995 ~ 18471076 (+)
il17a/f3 stmn4,LOC107698329,LOC107553446,LOC107732387,LOC107719388,LOC103148820,LOC106907996,LOC106571034,LOC106608277 other upstream 298332 18029130 ~ 18034178 (+)
ivns1abpa ivns1abpa,LOC107732388,LOC107726450,LOC107553504,LOC107599089,LOC107696153 other upstream 530060 17789294 ~ 17802450 (+)
henmt1 henmt1,LOC107710559,LOC107698398,LOC107555628,LOC107601273,LOC107726462 other upstream 830495 17496895 ~ 17502015 (+)
LOC122325444 rps7,LOC107668222 other upstream 2410230 15721861 ~ 15922280 (+)
cnih3 cnih3,LOC107601529,LOC107732540,LOC106607867,LOC108440801,LOC108248696,LOC106527994,LOC106571455,LOC107095392 other downstream 271331 18608512 ~ 18634663 (+)
srp9 srp9,LOC107553440,LOC107601484 other downstream 421448 18758629 ~ 18760209 (+)
abracl abracl,LOC107727609,LOC107553474,LOC107689463,LOC107558932 other downstream 498973 18836154 ~ 18839302 (+)
G139780 LOC107689450,LOC107553470 other downstream 509112 18846293 ~ 18852580 (+)
G139788 cited2,LOC107558941,LOC107727673,LOC107689449,LOC107553469 other downstream 534226 18871407 ~ 18873604 (+)

Expression

mep1a.1(mep1a.1,LOC107696105,LOC107601486,LOC107719100) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 80.
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mep1a.1(mep1a.1,LOC107696105,LOC107601486,LOC107719100) Expression in each Bioproject

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mep1a.1(mep1a.1,LOC107696105,LOC107601486,LOC107719100) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 250.
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Co-expression Network