ints9 (ints9)


Basic Information

Item Value
gene id ints9
gene name ints9
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20706925 ~ 20718097 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218859.1
AGCAGGTGAATCACGCACATACGGGACCGACGGAGCATAAACACATCGAGCAGGTAGAGCCACAACGTCACTCAAACCAGTGCCTGAGTGGGCGGTGCCTGTCTGACCGGAGCTGTTTCTCATTGCCGTACCGCAGTGCCGCGCCCGAGCGCGAGGGGGCGCGCGCGAGTCCGCCGCGAGCTGAATGACGCTCAGACACGCagtagaagaaaaaacacatcagTCCCGAATGTTTCCCGAGTTGCAGCATCACAGAAAACATCAAAGCTAAGAAATAGGTCCGGTTTCTAAAACAGCAGACATGAAACTGTACTGTCTGTCAGGTCATCCCACTCTGCCATGTAATGTGCTCAAGTTTAAATCCACCACCATAATGCTGGACTGTGGGCTGGACACAACAGCAGCCCTGTATTTCCTTCCTCTGCCTCTGGTGCACAGTCCAAGATTATCCAAACTCCCAGGATGGGTTTTCAAAGATGGAGCCATAAACTTGGAAAAAGAGTTGAAGGAATGCTCTGGACGTGTGTTTGTGGACTCGCAGCCTGAATTTTGCCTCCCTGAAaaagagCTGCTGGACCTTTCCACCATAGACGTGATCTTGATCTCAAACTATCACTGCATGATGGCTCTGCCGTATATCACCGAACACACAGGCTTCACCGGCACCGTATACGCCACTGAACCCACGCTACAGATCGGCAGGCTGCTGATGGAGGAGTTGGTGACGTTCATGGAGAGAGTACCAAAGGCTTATGCTGCTACCTGCTGGAAGAACAAAGAAATACAGCGgttgCTCCCGGGGCCTCTGAAGGACGCTGTGGACGTctggagctggaggaagtgttacAGCATGCAGGAAGTCAACTCTGCCCTCAGCAAAGTCCAGCTCGTGGGATACTCTCAGAAAGTGGAGCTGTTCGGAGCAGTGCAGGTCACGCCGTTGAGTTCGGGATATTCTCTGGGCAGCTCAAACTGGATCATTCAGTCACATTATGAGAAAGTGTCTTATGTGTCTGGTTCGTCTCTGCTCACCACACACCCTCAGCCCATGGAGCAGAGCTCTCTGAAGAACAGCGACGTGCTCATCCTGACAGGCCTGACCCAGATCCCCACCGCCAACCCAGACGGCATGCTGGGAGAGTTCTGCAGCAACCTGGCCATGACCATCCGAGCCGGCGGGAACGTGCTGGTGCCGTGTTACTCGTCCGGGGTCATCTACGACCTGCTGGAGTGTCTGTATCAGTTCATGGACTCGGCTAACCTGGGCAGCACCCCGTTCTACTTCATCTCTCCCGTGGCCAACAGCTCGCTGGAGTTCTCGCAGATCTTCGCAGAATGgTTGTGTCAGAACAAGCAGTCGAAGGTCTATCTACCCGAGCCGCCTTTTCCTCACGCAGAGCTGATACAGACCAATAAACTGAAGCACTACCCCAGCATCCACGGAGATTTCAGCAGTGAGTTCCGGCAGCCGTGTGTGGTGTTCACCGGTCACCCTTCCCTGCGCTTCGGGGACGTGGTGCACTTCATGGAGCTGTGGGGCAAATCCAGCCTCAATACCATCATCTTCACTGAGCCGGACTTCTCTTACCTGGACGCTCTGGCTCCGTACCAGCCGCTGGCCATGAAGTGCGTTTACTGTCCCATAGACACCCGGCTCAACTTCCACCAGGTGTCCAAACTCCTGAAGGACATCCAGCCTCTTCATGTGGTGTGTCCGGAGCCGTACACGCAGCCTCCTCCGTCTCAGCCTCACCGCTCAGACCTGATGCTGGAGCTGCAGCCTCCGCCCATGGCCTACCGCCGCTGCTCCGTCCTGGGACTTCCCTTCAGACGCAGATACGAGCGCATCCACCTGCTGCCCGAGCTCGCCAGGTCTCTGGTGCCGTCCGAGATTAAAGCGGGCGTCTCTGTCGCTACAGTGTCTGCGGTTCTGCAGTCCAAGGACAACAAGCACGTTCTGCAGccGGTGCCCAAGCCCACTCCAGTGCCGCCCAGTAAGAAGAGGAAGAGGGTGATGGAGGAGCCACCGGAGGTCCTGAACCCCAAACCTCTGCTGAGCGGAGCGGTTCCTCTGGAGCCTTTCCTGGCCACGCTTCACAAGAACGGCATCACAGAGGTGAAGGTGGAGGAGACGGCAGACGGACACATTCTTCACCTGCAGACGGAGGACGTGCTCATTCAGCTGGAGGAAGACGGCACACATATCATCTGTGACAACAACGAGCCGCTGCGCACCGCGCTCAGAGACCTGGTGCTGCGCTTCCTGCAGAaactctgacctctgaccccaggGCTCACGACCGGCCCGGAAACCGTTAGGTGTTTAATTGAGATTTAGAGAgagttttatttgtgtgttttatatcattGTAAAATAACTTTGGAAAAGCTTTTggaataaaccttttttttctgta
>XM_043218860.1
TCCAGAGCGACCTGTGGAACAAACATCAAACGGGAGTTCGTGCAGCGATAAATACACCTGCTTTATTTCCTGATCTCTCGCCATCTTACCGTGTTAAACTTCAGCGGATCTCCAGGAGCGTCTGAGCAGCCGTACCGCAGTGCCGCGCCCGAGCGCGAGGGGGCGCGCGCGAGTCCGCCGCGAGCTGAATGACGCTCAGACACGCagtagaagaaaaaacacatcagTCCCGAATGTTTCCCGAGTTGCAGCATCACAGAAAACATCAAAGCTAAGAAATAGGTCCGGTTTCTAAAACAGCAGACATGAAACTGTACTGTCTGTCAGGTCATCCCACTCTGCCATGTAATGTGCTCAAGTTTAAATCCACCACCATAATGCTGGACTGTGGGCTGGACACAACAGCAGCCCTGTATTTCCTTCCTCTGCCTCTGGTGCACAGTCCAAGATTATCCAAACTCCCAGGATGGGTTTTCAAAGATGGAGCCATAAACTTGGAAAAAGAGTTGAAGGAATGCTCTGGACGTGTGTTTGTGGACTCGCAGCCTGAATTTTGCCTCCCTGAAaaagagCTGCTGGACCTTTCCACCATAGACGTGATCTTGATCTCAAACTATCACTGCATGATGGCTCTGCCGTATATCACCGAACACACAGGCTTCACCGGCACCGTATACGCCACTGAACCCACGCTACAGATCGGCAGGCTGCTGATGGAGGAGTTGGTGACGTTCATGGAGAGAGTACCAAAGGCTTATGCTGCTACCTGCTGGAAGAACAAAGAAATACAGCGgttgCTCCCGGGGCCTCTGAAGGACGCTGTGGACGTctggagctggaggaagtgttacAGCATGCAGGAAGTCAACTCTGCCCTCAGCAAAGTCCAGCTCGTGGGATACTCTCAGAAAGTGGAGCTGTTCGGAGCAGTGCAGGTCACGCCGTTGAGTTCGGGATATTCTCTGGGCAGCTCAAACTGGATCATTCAGTCACATTATGAGAAAGTGTCTTATGTGTCTGGTTCGTCTCTGCTCACCACACACCCTCAGCCCATGGAGCAGAGCTCTCTGAAGAACAGCGACGTGCTCATCCTGACAGGCCTGACCCAGATCCCCACCGCCAACCCAGACGGCATGCTGGGAGAGTTCTGCAGCAACCTGGCCATGACCATCCGAGCCGGCGGGAACGTGCTGGTGCCGTGTTACTCGTCCGGGGTCATCTACGACCTGCTGGAGTGTCTGTATCAGTTCATGGACTCGGCTAACCTGGGCAGCACCCCGTTCTACTTCATCTCTCCCGTGGCCAACAGCTCGCTGGAGTTCTCGCAGATCTTCGCAGAATGgTTGTGTCAGAACAAGCAGTCGAAGGTCTATCTACCCGAGCCGCCTTTTCCTCACGCAGAGCTGATACAGACCAATAAACTGAAGCACTACCCCAGCATCCACGGAGATTTCAGCAGTGAGTTCCGGCAGCCGTGTGTGGTGTTCACCGGTCACCCTTCCCTGCGCTTCGGGGACGTGGTGCACTTCATGGAGCTGTGGGGCAAATCCAGCCTCAATACCATCATCTTCACTGAGCCGGACTTCTCTTACCTGGACGCTCTGGCTCCGTACCAGCCGCTGGCCATGAAGTGCGTTTACTGTCCCATAGACACCCGGCTCAACTTCCACCAGGTGTCCAAACTCCTGAAGGACATCCAGCCTCTTCATGTGGTGTGTCCGGAGCCGTACACGCAGCCTCCTCCGTCTCAGCCTCACCGCTCAGACCTGATGCTGGAGCTGCAGCCTCCGCCCATGGCCTACCGCCGCTGCTCCGTCCTGGGACTTCCCTTCAGACGCAGATACGAGCGCATCCACCTGCTGCCCGAGCTCGCCAGGTCTCTGGTGCCGTCCGAGATTAAAGCGGGCGTCTCTGTCGCTACAGTGTCTGCGGTTCTGCAGTCCAAGGACAACAAGCACGTTCTGCAGccGGTGCCCAAGCCCACTCCAGTGCCGCCCAGTAAGAAGAGGAAGAGGGTGATGGAGGAGCCACCGGAGGTCCTGAACCCCAAACCTCTGCTGAGCGGAGCGGTTCCTCTGGAGCCTTTCCTGGCCACGCTTCACAAGAACGGCATCACAGAGGTGAAGGTGGAGGAGACGGCAGACGGACACATTCTTCACCTGCAGACGGAGGACGTGCTCATTCAGCTGGAGGAAGACGGCACACATATCATCTGTGACAACAACGAGCCGCTGCGCACCGCGCTCAGAGACCTGGTGCTGCGCTTCCTGCAGAaactctgacctctgaccccaggGCTCACGACCGGCCCGGAAACCGTTAGGTGTTTAATTGAGATTTAGAGAgagttttatttgtgtgttttatatcattGTAAAATAACTTTGGAAAAGCTTTTggaataaaccttttttttctgta

Function

symbol description
ints9 Predicted to enable DNA binding activity. Predicted to act upstream of or within regulation of transcription, DNA-templated and snRNA processing. Predicted to be part of integrator complex. Orthologous to human INTS9 (integrator complex subunit 9).

NR:

description
integrator complex subunit 9 isoform X1

GO:

id name namespace
GO:0016180 snRNA processing biological_process
GO:0032039 integrator complex cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13146 INTS9; integrator complex subunit 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218859.1 False 2417 mRNA 0.55 18 20706925 20717973
XM_043218860.1 True 2421 mRNA 0.55 18 20706925 20718097

Neighbor

gene id symbol gene type direction distance location
riox1 zgc:162967,LOC107704066,LOC107669424,LOC107719421,LOC107559126,LOC107548410 coding downstream 26104 20674997 ~ 20680821 (-)
cpsf2 cpsf2,LOC107704064,LOC107669458 coding downstream 33805 20661011 ~ 20673120 (-)
fabp7b fabp7b,fabp7,LOC107675216,LOC107602177,LOC107717149,LOC107675046,LOC102218712 coding downstream 73143 20632717 ~ 20633782 (-)
smpdl3a smpdl3a,LOC107727613 coding downstream 74418 20626973 ~ 20632507 (-)
clvs2 clvs2,LOC107675233,LOC107675107 coding downstream 90710 20596263 ~ 20616215 (-)
hmbox1b hmbox1b,LOC107704071,LOC107559131,LOC107669440,LOC107745897 coding upstream 27105 20745202 ~ 20757734 (-)
cd109 LOC107704024,LOC107669414,LOC107548408,LOC107559083,LOC107719417 coding upstream 227540 20945637 ~ 20964922 (-)
nkx2.4b nkx2.4b,LOC107704036,LOC107548417,LOC107669430,LOC107745907,LOC107580186 coding upstream 361707 21079804 ~ 21082714 (-)
LOC122324706 NA coding upstream 436288 21154385 ~ 21168059 (-)
tram2 tram2,LOC107593275,LOC107721446 coding upstream 532651 21250748 ~ 21256606 (-)
G140413 NA non-coding downstream 80062 20626655 ~ 20626863 (-)
G140328 NA non-coding downstream 419930 20286480 ~ 20286995 (-)
G140315 NA non-coding downstream 438659 20266668 ~ 20268266 (-)
G140304 NA non-coding downstream 538927 20148280 ~ 20167998 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 797278 19905631 ~ 19909647 (-)
G140449 NA non-coding upstream 18491 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 274424 20992521 ~ 20995513 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding upstream 278269 20996366 ~ 20996681 (-)
LOC122325251 NA non-coding upstream 327728 21045825 ~ 21049976 (-)
G140592 NA non-coding upstream 365197 21083294 ~ 21083559 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other downstream 48545 20634296 ~ 20658380 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other downstream 164676 20410629 ~ 20542249 (-)
G140277 cad,LOC107602171 other downstream 643948 20061602 ~ 20062977 (-)
G140227 cad other downstream 647322 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 1091723 19601532 ~ 19615202 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 250091 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 371307 21089404 ~ 21091008 (-)
G140616 NA other upstream 480613 21198710 ~ 21278741 (-)
lin28b lin28b,LOC107721434,LOC107719403,LOC107697090,LOC107550364 other upstream 765495 21483592 ~ 21505655 (-)
LOC122324936 NA other upstream 789147 21507244 ~ 21512483 (-)

Expression


Co-expression Network