LOC122324455 (slc35d3,LOC107727602,LOC107676236,LOC107675071,LOC107717122)


Basic Information

Item Value
gene id LOC122324455
gene name slc35d3,LOC107727602,LOC107676236,LOC107675071,LOC107717122
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20306639 ~ 20311285 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218870.1
agagagagagagagagagagagatagagatatatatataagtgattattactattattacattGATGTGACATATACTTGCCCCtatacaatatattatgcattcatGCAGCCTAAATAGTATAGTGGCTGTCAGGGATTTTTGCAGGGGCTTGCTTTTTTGAGCCAAATGACCTTGAATCATGAGAAGTGATATGAAGCCTTTGAAATTGTAACACAAACCTTGGAAACGCGACCTGGCACTTAAAGCGGCAATTTTCCATAGAGTTAAAACGGTATACAGCGGTGCCAGTTATACTATGACTTTCAATTAGTGTGTACAGAAAATGCGTGAcctgaaacaacaacaaaaaaaaacactttaaacccGATTATTTGTCTGGGCTaaatcacagagagagagaaaaacgcaGTCCTAAAGCTGCGTAATTTTGCCTCATCGGGCGAACGcacattcttttaattttttgccatttaaaacatttcatttagctggcatgtttttaaaacaccAGATGCCCTGATCTAACTTAATAGTGACTGAagtgttcaaaaatacaaatgagtCCGCATTGATACAACAGTAGGCTAGCATTAAGTATTATTTTGGAGGTTTAAACCTTCGGTTTACAGACTAAATTGCGCGCATCTAGTAGCATCGTTTCTAATTGTGAGCTGTCTCCAACgagaaataaaagtgtaaagtGCAATCAAAGTAAACGGATTGGCTGCAGTTGACTTCAATTCGATCACTGTACAAAGAAAGAGACCTTCGGAGCTGCGGCGCGTCGCATTCATTCAGCTGCGCTCGTGTTGCGTGAATTACGCTCAAGAGGAGACTCGACGTGAATATTCAGCAGTGGACTCAGAGCTCAGTGCGTAATACGGAGACGCCGGGAACCCCCAGTCTACGAGGAAAGACATGGAAGTTTGCAAAGGACGTTTGCTGGGCATCTCGGTGGCCGTTGCGCATGGATTTTTTTCGGGATCGCTgaatattttgttgaaattcCTCATTACTACCTACAGCTTCACGTATCTGACTTTAATTCAGTGTCTGACCAGCGGCACTGCGGCTCTCACGTTAGAGGTGCTGAGGAGACTGGGCAAAATAGATATACCTCCTTTCAGCCTCCAGTTAGTCAAAGTTTTTGCGAGTGTCTGTATTTTGGCAACTTTGCAGTCCACATTGACCCTCTGGTCTCTCAAGGGATTGAGTTTGCCCATGTATGTTGTGTTTAAGCGATGCTTGCCGTTGGTAACGTTGGGGATTGGAGTGTGCGTGTTGAAGAACGGCATCCCGTCGGCTGGGGTTATAACCGCAGTTCTCATCACCACTGGAGGAGCAGCACTGGCTGGTGCTGGAGATCTGACAGGTGACCCTTTCGGCTACGTGACTGGCATTTTAGCTGTGATCGTCCACGCCTCCTACTTGGTGCTCATCCAAAAAGTCAGTGCAGACAGTGATTATGGGCCGCTCACAGCCCAGTACACCATTGCAGTGGTGGCCTCTCCCGTTCTCCTCATCTGTTCCATTGTAAGCATGGACGCCATCGATATGTGGACATATGAAGGTTGGAAGAACCCATTTATCACAGGCATCTTCTGTACCTGCATCCTCATCGGTTGCGCGATGAACTTCACCACACTGCATTGTACCTATATCAACTCGGCCGTCACCACTAGCTTTGTGGGGGTGGTCAAGAGCATAGCTACTATCACTGTGGGCATGCTGGCCTTCAATGACGTGCTGCCAACCAAACTGTTCATTGCAGGCGTGGTGGTTAACACCGTCGGCTCCATCACCTACTGCGTGGTTAAGTATCACGAAACCAAAAAGAAGGTAACCTACCAGGATATGGACGAGTCTGCTAAGGATGAAGGACTTCCAGGAGAACCTTATGTGGAACCAGCCAAGCCTGATGGAGATATGGAAACTCTTCCAAATGAGCAGGAGAGCGTTCCCAATGGCAGCCTGATGGCGTTAGTTAACGGCAATGACCAGGTTCCCAGCCGTGAGAATAAAGTGGCTGAGTCCATAGAATTAGAAAGACAGGGGATCCCATCGGACGATCCTACAAGACAGTCTCTGAGCGACAGTTACGTAGGGGTCTGGAGATCCATTCACACTTTAAAGGTCTTCAAGAAAGACACTTTGCTTGACAACATGGAGGTTCAAAGTCCTTGATGATTGGTTTTCTGCTTGACAGAAGTGCATGTAAAGTTTAAGTATTGTTGAACTGATGGTGTGAACAATGTTTGCCTTTTTCTCTCCTGAACAtgattttatgaaaaacatttattttttataaaaaggtaTAGTCTGTTTGTATATTATAGAGGGAGTGTAACAGATGATTTCCCGGTAACAGATGTGCCAATTTATTGACCTAaaataaagaatcatttttttcaggatcagtttaaaattactttaggggaaaaaaatctataatagagATAGTCTACTCAGAAATCAAAATTCTATCATTATTCTCTTATCCTCGTATTTCTTAGTTCTTTGGAGCATAAAAGATGATACGTTAAAATATGTTGAGgtcgagtaaatgatgacagaatttttattatggctttaaataaattcagttgtttttattttgaatgattatttatatttctatgcACGCTGTGTCTGTGCCTgtatattttctgtgttttgtctaAGAATGCAAATCTTGATGTAGGAGGCACTGAAATTTCTCATTCGCATGTAATAtgcacaattaatttaaactggTTTTACATCAAAATTCTGATCTTTGTGTATCTCTTTAATAAATCCCACCAACTGCTTTTGCTCAAAGAAAGTGTGCAATCatacaaaatcatatttatctAGCAATCCGGGAGATGGTTTGCCTGCAAGAGAACTGCTGTTCAGACATTAGTGAAAAACGATTTTTTatccaaataataaaatgcaattttatttggCCAAAATGGACGAGGTTACGAGATATCAACTAATTctcataaaccaaaaaaatatatgtttaaggTGGAAGAAAATGCAACCTGTTGAAAACAGATTTACTTAAATATGGTTTGAGCTgatcaaaatgttttgttttgtgaaatactgtcttttaaaagcatgaaatCGAGATTCAAGAACAAAACATCTGATCACATCAgaacaaataatcaaaaatctaaatacattgTAGTGTTTGCTTTTGGGACATTTTCATCtactttcacacacacttttacacgCACTTGCCATTTGTTGTTAAGTTTTAAAATCTCAAGCGCTCGCACTGCTGCCGATCTCTGCGTTAAATTAAAGCCAATATCCGTCAAGCTTGTTTTAGCTGACTTCaccaaatgtaatatttgatgTATTCGGGTGGGTTTCTTATCAGAAAAAACAGACCCGTCAAAACCGATGCTTTAGGCAATGCTAGGCTACTGAAAATgcataatgaaatgtatttctaaatataGAAATTCTACAGCGTTTTCATGTAACACAGTGAACATGCCTATTAATTGTACTTGCAAAAATGCGAGTTCGTcagtcaaaataaacatttgctgaaaatgtactccgTCAGATGTAagtaagtttgtttcttcattggaacaaaTATGAAGAAATTGAGCATTGCATCACTATTCTATATATGCAGTTgaaatttttttgcaaattttaatTTCGGGTAAGCTATTTCTTTAACGGCAGGATAATGCGTCTAAAGGTGCCttgcaaaactttattttgtggtttgttaatattattctCAGTCAGACAAGCATCTTCATGAATAAACGCAAACTTGAATGAACTAAACTTTAGACCTCTCTGAGTGTTATTATTTGTTGCTGCACTAGCACCACAAAGGTTTACTATATAGGGAACATTCATGTTACACTCCCCATGgctttccttttaaaatgatcttgcCTAACAATGAACAAGTAAAA

Function

symbol description
slc35d3 Predicted to enable antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to be involved in carbohydrate transport and pyrimidine nucleotide-sugar transmembrane transport. Predicted to act upstream of or within energy homeostasis and positive regulation of protein exit from endoplasmic reticulum. Predicted to be located in early endosome and endoplasmic reticulum. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus.

NR:

description
PREDICTED: solute carrier family 35 member D3-like

GO: NA

KEGG:

id description
K15281 SLC35D; solute carrier family 35

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218870.1 True 3947 mRNA 0.40 2 20306639 20311285

Neighbor

gene id symbol gene type direction distance location
pbk pbk,LOC107598104,LOC107717112,LOC107727585,LOC107676230,LOC107602197 coding downstream 1765 20301406 ~ 20304874 (-)
ccdc25 ccdc25,LOC107727664,LOC107602198,LOC107676265,LOC107675065,LOC107598073,LOC107716775 coding downstream 10480 20293294 ~ 20296159 (-)
clu LOC107602200,LOC107727630,LOC107676249,LOC107675063,LOC107716747,LOC107598069 coding downstream 42789 20258253 ~ 20263850 (-)
LOC122325054 cyp39a1,LOC107727679,LOC107676273,LOC107602202 coding downstream 64328 20230975 ~ 20242311 (-)
rcan2 rcan2,LOC107602203,LOC107727622,LOC107675064,LOC107598065,LOC107676238,LOC108429336,LOC105901692 coding downstream 76818 20173548 ~ 20229821 (-)
pex7 pex7,LOC107727680,LOC107676274 coding upstream 139 20311424 ~ 20328698 (-)
hey2 hey2,LOC107717129,LOC107727582,LOC107598074 coding upstream 19405 20330690 ~ 20334913 (-)
tpd52l1 rnf217,tpd52l1,LOC107727670,LOC107676269,LOC107602193,LOC107675045,LOC107716996,LOC107602194,LOC107676250,LOC107675093,LOC107727644 coding upstream 61900 20373185 ~ 20407062 (-)
clvs2 clvs2,LOC107675233,LOC107675107 coding upstream 284978 20596263 ~ 20616215 (-)
smpdl3a smpdl3a,LOC107727613 coding upstream 315688 20626973 ~ 20632507 (-)
G140328 NA non-coding downstream 19644 20286480 ~ 20286995 (-)
G140315 NA non-coding downstream 38373 20266668 ~ 20268266 (-)
G140304 NA non-coding downstream 138641 20148280 ~ 20167998 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 396992 19905631 ~ 19909647 (-)
G140248 NA non-coding downstream 504971 19800522 ~ 19801668 (-)
G140413 NA non-coding upstream 315370 20626655 ~ 20626863 (-)
G140449 NA non-coding upstream 425303 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 681236 20992521 ~ 20995513 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding upstream 685081 20996366 ~ 20996681 (-)
LOC122325251 NA non-coding upstream 734540 21045825 ~ 21049976 (-)
G140277 cad,LOC107602171 other downstream 243662 20061602 ~ 20062977 (-)
G140227 cad other downstream 247036 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 691437 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 1002671 19298234 ~ 19303968 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other downstream 1043687 19261466 ~ 19262952 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other upstream 99344 20410629 ~ 20542249 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 323011 20634296 ~ 20658380 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 656903 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 778119 21089404 ~ 21091008 (-)
G140616 NA other upstream 887425 21198710 ~ 21278741 (-)

Expression


Co-expression Network