eif2b2 (eif2b2,LOC107719358,LOC107685362,LOC107697194,LOC107742715)


Basic Information

Item Value
gene id eif2b2
gene name eif2b2,LOC107719358,LOC107685362,LOC107697194,LOC107742715
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21774884 ~ 21779245 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218885.1
agagcAGGACTCGTGAACCGGAGGAGGTTTCTGTCCGGTTCCGCGAGCGTTCAAGCTGTCAGGAGAATCAACGCGTTACTGAGACACCGGTCAAAATGCCCGGCGCGGATAAAGAGACGGACCTGTCCGAGCGCATCGAGTCGTTTCTGTCCGAGCTGAAGCGCTGCGGCAGCGGGGCGGGATCCCTCCGGGGCTCGGCGGAAACTGCCCGAGAAACGACCGCTTTACTCCGCAAAATCACCGCGCAGGCCCGCTGGGGCAACGCCGgtgAGCTGATGGAAATCATACGGAAGGAGGGCAGGCGGATGACGGCGGCACAGCCGTCCGAGACCACCGTCGGTAACATGGTCCGCAGGGTGCTGAAGATCATCCGAGAAGAATACGCGAGATCCAGAGGCAGCAGCGAAGAGACGGATCAACAGGAATCTCTGCACAAGCTGCTGACGTCTGGAGGATCCAGCGAAGACAACTTCAGACAGCACTTCGCTCATCTCAAAGCCAACGTCATCGAGGCCATCAACGAACTGCTGACAGAACTGGAGGGCACCACAGACAACATCTCCATGCAGGCGCTGGAACACATCCACTCTAACGAGGTTATAATGACCATCGGCCGCTCCAGAACAGTGGAAGCTTTCCTGAAAGACGCGGCGCGGAAACGCAAATTTCACGTCATCGTTGCGGAGTGTGCACCCTTCTGTCAAGGTCACGAAATGGCCACAAGTCTTTGCAAAGAGGACATTGAGACCACAGTGATCCCAGACGCGGCCATTTTCGCTGTAATGTCAAGAGTCAACAAGGTGATCATCGGCACACAGACGGTTCTGGCTAACGGCGGTCTGCGGGCGGTTAATGGCACGCACACACTGGCTCTGGCTGCTAAACACCATTCGACTCCTCTCATCGTCTGCGCTCCCATGTTCAAGCTCTCGCCACAGtttcCTAACGAGGAGGACACGTTTCATAAATTTGTTTCACCACATGAGGTGCTCCCCTTTACCGAAGgtgaGATCTTGTCTAAGGTCAACTCTCACTGTCCGGTATTCGACTATGTTCCTCCCGAGCTCATCACATTATTCATCTCAAACATCGGGGGAAACGCTCCTTCATACATTTACCGTTTGATGAGTGAACTTTACCATCCTGAAGACCACGAACTGTAGActagaaaataaagaaactctTGACTCGCA

Function

symbol description
eif2b2 Predicted to enable translation initiation factor activity. Predicted to contribute to guanyl-nucleotide exchange factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within translation. Predicted to be part of eukaryotic translation initiation factor 2B complex. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter. Orthologous to human EIF2B2 (eukaryotic translation initiation factor 2B subunit beta).

NR:

description
translation initiation factor eIF-2B subunit beta

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0005851 eukaryotic translation initiation factor 2B complex cellular_component
GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity molecular_function
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03754 EIF2B2; translation initiation factor eIF-2B subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218885.1 True 1193 mRNA 0.54 8 21774884 21779245

Neighbor

gene id symbol gene type direction distance location
tmed10 tmed10,LOC107697197,LOC107685358,LOC107593259,LOC107550417 coding upstream 515 21771292 ~ 21774369 (+)
fosab LOC107697196,LOC107719360,LOC107685356,LOC107550415,LOC107742716 coding upstream 6282 21766414 ~ 21768602 (+)
esrrgb esrrgb,LOC107685376,LOC107697200,LOC107550385,LOC107719365,LOC107708321 coding upstream 93964 21668066 ~ 21680920 (+)
gpatch2 LOC107708325,LOC107593261,LOC107685352,LOC107550410 coding upstream 109950 21656663 ~ 21664934 (+)
dnmt3aa LOC107593266,LOC107721450,LOC107685348 coding upstream 153813 21583612 ~ 21621071 (+)
rmdn3 rmdn3,LOC107593256,LOC107685363,LOC107719355,LOC107697192 coding downstream 8714 21787959 ~ 21794143 (+)
bmf2 LOC107550420,LOC107593255,LOC107719427,LOC107685367 coding downstream 37958 21817203 ~ 21824119 (+)
taar10 LOC107697082,LOC107550377,LOC107719389 coding downstream 110906 21890151 ~ 21891194 (+)
taar10a taar10a,taar10b,taar10d,taar10c,LOC107719440,LOC107697108,LOC107550390,LOC107719439,LOC107697105,LOC107697107 coding downstream 117706 21896951 ~ 21897961 (+)
LOC122325159 taar10b,taar10c,taar10d,taar10a,LOC107719439,LOC107550391,LOC107697107,LOC107697105,LOC107550394 coding downstream 120527 21899772 ~ 21900828 (+)
LOC122325564 NA non-coding upstream 36137 21735966 ~ 21738747 (+)
G140747 NA non-coding upstream 39212 21732575 ~ 21735672 (+)
G140698 NA non-coding upstream 75626 21698421 ~ 21699258 (+)
G140721 NA non-coding upstream 137690 21636509 ~ 21637194 (+)
LOC122325460 NA non-coding upstream 221770 21551685 ~ 21553114 (+)
G140784 NA non-coding downstream 60978 21840223 ~ 21840465 (+)
G140786 NA non-coding downstream 65588 21844833 ~ 21845453 (+)
G140788 NA non-coding downstream 67569 21846814 ~ 21847021 (+)
G140792 NA non-coding downstream 70517 21849762 ~ 21850135 (+)
G140794 si:dkey-246e3.4,taar14f,LOC107550386,LOC107719426,LOC107550373,LOC107697083,LOC107719394 non-coding downstream 71617 21850862 ~ 21853121 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 572922 21168775 ~ 21201962 (+)
G140533 NA other upstream 672374 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 983181 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 1100495 20673461 ~ 20674389 (+)
trdn LOC107602167,LOC107727612,LOC107675223 other upstream 1182725 20554113 ~ 20592159 (+)
G140785 NA other downstream 64901 21844146 ~ 21844701 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 692516 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 727482 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 965167 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 1063560 22842805 ~ 22860327 (+)

Expression


Co-expression Network