LOC122324467 (LOC107564327,LOC107712204,LOC107659822,LOC107712203,LOC108411733,LOC108258090)


Basic Information

Item Value
gene id LOC122324467
gene name LOC107564327,LOC107712204,LOC107659822,LOC107712203,LOC108411733,LOC108258090
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25939571 ~ 25943285 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043218889.1
AGCTCCAGGTCCATCATGAGTTGCCCGTCCTCCGGTCAGCAGGGTGTTTACCCACAAACCCCTCAGCAGTGGCCCGGTCAGCCCTGTCCACCCTGCTGGTCCTGCCAACCCGCTCAGCCCAACTGGCCGGTTAACCAGCCCGGCGCATCGGCCCCCGTGACCTGGCCGGTCCAACCCACCCAACCAGGCTGGCCCAACCCTCCAGTGATCCAACCAATCCAACCAACTCAACCAATCCAACCAATTCAACCAATCCAACCAACTCAACCAATCCAACCAATTCAACCAATCCAACCAACTCAACCAATTCAACCAATCCAACCAACTCAACCAATCCAACCAATTCAACCAATCCAACCAACTCAACCAACTCAACCAATCCAACCAACCCAGCCCATCCCTCCGGTCCAGCCGagctggcccgctcaactcccCTCTCCGCCGGGTTACCTGCCGTCTCCATCAGCTCCGGCGTGGCACGGTAATCCCGGTCAGCCCGGGTGGCCCGGTCAGGGGCCCGCAGGAGGAGCCCCGCAGCAGTGGCCCCCAGCGCCTGCCATCGCTCCTGTAGTGGTTCCTTTCAACATGAACTTTCCCCGCGGCATCTACGACAAACTGATGCTGACCATCAGAGGACAGATTAAACCAGACGCCAAGATGTTCACGATCAACTTCCTGCGGGGGAACGACATCGCGCTCCACATCAACCCGCGCTTCAGCGAGGCAGGGAAGCCGGTTCTGGTCCGCAATCACAAGCTGGGAGAGCGCTGGGGGAAGGAGGAGCGGGATCTTCTCACGCCCTTCCCCTTCATGCCCGGACATCACTTCGAGATGAAGATCCTCTGCACCTTCAGCGAGTTCAAGGTGTCCATCAACAACACGCCGGCCTTCGACTTCCAGCACCGCATCAAAGAGGTCAACCAGATCGACCGCATCAACATCCTGCACGACGTCACGCTCACGTCCGTCAACGTGGACACGCTCCCATGAGCCTCAGCCAGAAAACAAGAGGACTGCTGCTCCACGCTTCAGAATAAAACTCGCTAGCTACGTTTCCATCGATCGAAACTGGAATATTGCATCAAACATTTTGAACGAAGCACCGCTTCCCTCAGAGAGAAATACTTAGCTGTGAACCAGACCGTTCGGCCAGAAGTCACCTGACTCTTTTGATGCACACTAAAGAGTTGATTCAGTAAATGAGTTGTAGATAACGCACATGGTTTCTGATTGGATAAATTCACATTTTGGCaaatttttatgcaatattcaaaaatatgatggaaacatagctactgacttcacacacaaatgtatttattttttacttaaacaaaaaaactacttttaacaCCTTTttatactttgtgtgtgtgtgtgtgtgtgtgtgtgggttttgtgaaaaatgccctataaaaagtattattttctctttatgttATATTGTTACCAAATATTGGATTCAAGCTTTTTTCCACCAATCAGCACGTGTTATTTCAGAGTGTATGGATCGTATGgatcttttgttcatttaagaTCATCATgtcatagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagtgtgtgattaCGGTACAGTGTGATTCATCACTAATACATGAATAACTCTACTAATGTTGAGCGTGAACTGAAGTATTAAAGCCGATGTAAAAGAATCATAAATGTCatctacattttatatttagatcATGTTTTAGTTTATTGTGTAAGAAATCAAGTCGAACAATCACtgatcataaataaataaataaaaacataaataagaaGTTGATGTCATTAATTAAATCAAGACAAAACACTAAGATGAAATACTGCTGATTACAAacagatgaataaaacattaaaagcaattaaaaactcaaataatctgttaaaaataataaatattaacatccTCAAGAATAAATGATACGAGTCAGAAACACCTCAGATCATAAACTACTTCAAACCGCTAAAGAtactaaaatattcaaatatgtgtgtgtgtgtgtgtgatacacctaaaattataaaatattattacacacacacacacacacacacacacacacacacactct

Function

NR:

description
PREDICTED: galectin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043218889.1 True 2121 mRNA 0.45 4 25939571 25943285

Neighbor

gene id symbol gene type direction distance location
lamp5 lamp5,zgc:165600,LOC107704368,LOC107557889 coding upstream 50722 25879511 ~ 25888849 (+)
plcb4 plcb4,LOC107564330,LOC107659823 coding upstream 64143 25831015 ~ 25875428 (+)
LOC122324600 myh6,smyhc2,LOC103031694,LOC102786665,LOC108251423,LOC107589804 coding upstream 191953 25741291 ~ 25747618 (+)
dio3b dio3b,LOC107704370,LOC107557013,LOC107728129 coding upstream 396046 25540213 ~ 25543525 (+)
slc25a47a slc25a47a,LOC107557014,LOC107728134,LOC107661346 coding upstream 452898 25481480 ~ 25486673 (+)
LOC122325520 LOC107712196,LOC107659793,LOC107564338 coding downstream 36182 25979467 ~ 25980378 (+)
LOC122324854 LOC107575530 coding downstream 39527 25982812 ~ 25994094 (+)
yy1b LOC107756049,LOC107704390,LOC107712210,LOC107659816,LOC107564321 coding downstream 81576 26024861 ~ 26030986 (+)
entpd5b entpd5b,LOC107756050,LOC107704388 coding downstream 111836 26055121 ~ 26069045 (+)
LOC122324376 clg18h14orf37,cunh14orf37,c25h14orf37,LOC107574488 coding downstream 242391 26185676 ~ 26194962 (+)
G142107 NA non-coding upstream 45854 25891158 ~ 25893717 (+)
G141860 NA non-coding upstream 324207 25613542 ~ 25615364 (+)
G141825 hsp90aa1.1,LOC107704347,LOC107557012,LOC107564585 non-coding upstream 326170 25605900 ~ 25613401 (+)
G141824 hsp90aa1.1,LOC107704377,LOC107564585,LOC107730601,LOC103369948,LOC108231827 non-coding upstream 327726 25609303 ~ 25611845 (+)
G141859 NA non-coding upstream 330393 25608001 ~ 25609178 (+)
G142133 NA non-coding downstream 61 25943346 ~ 25962620 (+)
G142139 NA non-coding downstream 10515 25953800 ~ 25954171 (+)
G142145 NA non-coding downstream 24435 25967720 ~ 25968336 (+)
G142157 NA non-coding downstream 105186 26048471 ~ 26054584 (+)
G142086 LOC107756052,LOC107575297 non-coding downstream 131846 26075131 ~ 26076630 (+)
LOC122324336 LOC107564333,LOC107557900,LOC107659797,LOC107712192 other upstream 110656 25776475 ~ 25828915 (+)
fig4a fig4,fig4b,LOC107667833 other upstream 628144 25250898 ~ 25311427 (+)
G141775 NA other upstream 716462 25221967 ~ 25223109 (+)
irf4l LOC107572583,LOC107739192,LOC107671083,LOC107557006,LOC107661363,LOC107728105,LOC108443244 other upstream 771150 25163981 ~ 25168421 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other upstream 944734 24968880 ~ 24994837 (+)
LOC122325160 LOC107564323,LOC107659819 other downstream 53129 25996414 ~ 26002923 (+)
evlb evlb,LOC107756048,LOC107704391,LOC107564322,LOC107659817,LOC103152656,LOC105929101,LOC106954543,LOC106922124,LOC107090853 other downstream 60478 26003763 ~ 26024232 (+)
G142173 NA other downstream 292136 26235421 ~ 26257234 (+)
G142333 LOC102197881 other downstream 535266 26478551 ~ 26479201 (+)
G142416 NA other downstream 959962 26903247 ~ 26905157 (+)

Expression


Co-expression Network