LOC122324513 (ust,LOC107693205,LOC107732646,LOC107726493,LOC107696116,LOC107601503)


Basic Information

Item Value
gene id LOC122324513
gene name ust,LOC107693205,LOC107732646,LOC107726493,LOC107696116,LOC107601503
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15993842 ~ 16001170 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219006.1
tatttgtgttgatttatttatttatttttttgccaggTGGATTTGATGAGAAACATTAGCACTATTCCACAGCCTTTTTTGTACACCAGACATGTTCACTTTCTCAATTTCACAAGGTTTAGGATAGAACAGCCTGTCTACATAAACATCATCAGGGATCCTATTAACCGTTTCCTCTCCAATTACTTTTTTCGTCGTTTTGGGGACTGGAGAGGAGAGCAGAATCACTTGATCCGCACACCCCAGATGAAAGATGATGAGCGATATCTGGACATTAATGTTTGCATCATGGAGAACTACCCAGAGTGTTCTAACCCACGTCTCTTTtacattgttccatacttttgtGGACAACACCCTCAGTGCAGGGAGCCGGGTGTTTGGGCTGTGGAGAGGGCCAAACAAAACGTTATAGAGAATTTCCTACTTGTGGGAAttctggaggagctggaggatgTGTTGCTCTTGCTGGAGAGACTCCTACCTCACTACTTCAGTGATGTCCTAACCATCTACAAGAGTCcagCATTCTGGAAGATGGGGAACCTTACAGGCACAGTGAAGAAGCACATGCCCACTCTAGAGGCCCTACAGGTACTTTACCAAAGGATGAAGTATGAGTATGACTTTTACAACTTCATTCGTGACCAGTTTCATCTCACTAAGAAGAAGATCGGCCTCAAGTCTGCCTCCCAAAACTCTGCTCATGAACCTGACTTTCTCCGCGAGCTCGCCCTCAGGACCCATGAGCCtttggaggaggaggaggaggaggaagaagaagaggacaTGGGGCAAGAAGATGCCAACATCTGGTTGGTTCAGCCCTGAGTAATAGCCATTGAGGTGTAGGCATGGCAGATATCTCATAAGCTTGATGTCTATGTCCAGTCAGGAGGTAGAGTCAAAAGTCCCAGGTTAAAATTGGGTGTTTAACCCCCGTTTTTAACCGGATGACCCTTCAAGACACTCTCAAGAGGAGAAGGGGGTCGCAGAAGGGTCTGGATAATTATTTAAGGAACCAACAATTGTGGCAAAACaattttgttcatctttatGAAATTTAGTTGGTTATGATCATTTCCTGGTGAGATGATTCAAGGTTGGAATTACAGGGATATTGCTTGATTGTCAGAATGGAGGGATGAACTAATTGTGGTTTAGCAGAATGAGATGCTGTGGAAGTCTGATTTTAGGCACTACTTCTGTACACTTGGTACCTGGGTGATCTCAGACTCGCGCGTCAacaacacactttcacacatgAACACATTCAGACTATGCTATGTAGGCGAGTGAGGATCACAACAACGTGCCAAACCTTCAAAGTGCCAAGGATTACTGCATCAAGCTTAGACGCTGTAGCTGTAATCACCGTAAAACAACTCAAACGCACCAATCAGATCTCTTCATCACTCGCTTCCACTTCTGGTTCCAGAAACCTGCTGCAACTCTGTGCCAgaatttcagtctttttttgaaagaatcgTTTTATGTTGTACATGTAAGATGTACAATGAATCAAAACTGTTTGAATGCCTGGAACATGTCAAATGCAGcacattgttcatttaaaatgtttgatgtaGATGTTGAACATGTTCTTGCCTTGTCAGTGTGTCATCTGTTGTGTTCAGTCGTTGCGTAAAATTGGACCCTTATGTTCTTACAGTACTTGGTACACTTTGTGCTAACAACACttaaaagtaatagttcacaCACATTGTAATACATTGTAATGATGTTTTTGTTAGCAGCAATACAATTTTATCCCATCCTGGTTTGCCTTACAGCGAATAACATAAAACTGCTGGGATATCAAATAATATCTTGCTAGTTAAAACTAAGCTATTCAAAGTTCATACTCCTCTGTCAGCGCCTAATGTTTTGAGCAGGATCACAAGCTAAAACAAGAAGACagtaatattaaactaaatgaattattttggaGGTAAAACAAATATACTCATGATCAAGAAAAATGTCACACATATTGATGAAAAAACTAATCTGACAACAGGACAAAAATATTCTTGAATGTGAAAACATGAGTTACTacactgcatttaaactcaatttatgtgtgtgtgt

Function

symbol description
ust Predicted to enable sulfotransferase activity. Predicted to be involved in dermatan sulfate biosynthetic process and protein sulfation. Predicted to act upstream of or within establishment of cell polarity and regulation of axonogenesis. Predicted to be located in Golgi membrane.

NR:

description
PREDICTED: uronyl 2-sulfotransferase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219006.1 True 2091 mRNA 0.41 5 15993842 16001170

Neighbor

gene id symbol gene type direction distance location
LOC122324514 rps7,LOC107668222,LOC107726469,LOC107601753 coding downstream 70985 15919584 ~ 15922857 (-)
LOC122325620 NA coding downstream 71890 15921733 ~ 15921952 (-)
LOC122325614 NA coding downstream 72841 15920781 ~ 15921001 (-)
LOC122325618 NA coding downstream 73341 15920281 ~ 15920501 (-)
LOC122325615 NA coding downstream 73842 15919780 ~ 15920000 (-)
LOC122324509 ephx1,LOC107553477,LOC107732537,LOC107601524 coding upstream 111922 16113092 ~ 16118444 (-)
hebp2 hebp2,LOC107726446,LOC107693223,LOC107732635,LOC107602836,LOC107549119,LOC107696074 coding upstream 298104 16299274 ~ 16302044 (-)
kif25 kif25,LOC107726448,LOC107549120,LOC107696106,LOC107732626 coding upstream 301021 16302191 ~ 16310567 (-)
acat2 acat2,LOC107696107,LOC107732634,LOC107549121,LOC107693222,LOC107726488,LOC107601581 coding upstream 309716 16310886 ~ 16314723 (-)
LOC122324754 wtap,LOC107732643,LOC107549122,LOC107693220,LOC107696108,LOC107726473,LOC107601562 coding upstream 313848 16315018 ~ 16321419 (-)
LOC122325612 NA non-coding downstream 269612 15724010 ~ 15724230 (-)
LOC122325616 NA non-coding downstream 270559 15723063 ~ 15723283 (-)
LOC122325623 NA non-coding downstream 271073 15722550 ~ 15722769 (-)
LOC122325621 NA non-coding downstream 271577 15722046 ~ 15722265 (-)
G138862 NA non-coding downstream 282789 15684176 ~ 15711053 (-)
G138956 NA non-coding upstream 205900 16207070 ~ 16208001 (-)
G138960 NA non-coding upstream 213174 16214344 ~ 16216716 (-)
G138983 NA non-coding upstream 322236 16323406 ~ 16325753 (-)
G139029 apobb.1,LOC107693214 non-coding upstream 449356 16450526 ~ 16451893 (-)
G139032 NA non-coding upstream 453714 16454884 ~ 16455403 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 197 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 149268 15844354 ~ 15844574 (-)
LOC122325622 NA other downstream 150213 15843409 ~ 15843629 (-)
LOC122325617 NA other downstream 150724 15842898 ~ 15843118 (-)
LOC122325611 NA other downstream 151224 15842398 ~ 15842618 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other upstream 16148 16017318 ~ 16104727 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other upstream 346031 16347201 ~ 16366799 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other upstream 454298 16455468 ~ 16462216 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 1345636 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 1800232 17801402 ~ 17824201 (-)

Expression


Co-expression Network