LOC122324568


Basic Information

Item Value
gene id LOC122324568
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17603658 ~ 17608945 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219095.1
CCGGGAAGGGATGTTCCAAGCCATAGCAGAGCTCCTATATAAATGCCCCAGAGGATGATTACCAGACCAGATTCTCAAATCAGACCATTATATTAGTAGAGAAGTACACAGACGACCATTAAGAGGACCATTTTATAGTTGTACATCCATGACAATGGGCATCTTCAACAAAGTACCATTGAAATTTTTAGCTGCCATTGTTCTTATTTCTTCAGTGTTAAACTTATGGAGAGGCACTGAAGGCTGGTCATACCATTCTTCAAAAACCACTATGAACTGGGAATCTGCCAGACGCTGGTGCAGGCAGTATTACACCGACATGGTAGCCATCCAGAATAAAAAAGAGATTGACCACCTCAATGATGCTTTACCAAAAGTTCATGGATATTACTGGATTGGCATTCGTAAAATTAATGGCTCTTGGACCTGGGTGGGAACTAATAAGACACTTACAAAGGAAGCTGAAAACTGGGCATATAAAGAGCCCAATAATGGAGGGAATAATGAAGACTGTGTggaaatatacattaaaaggGAGAAAGATGAAGGAAAATGGAATGATGAGTCCTGCTTAAAGAAGAAGACTGCACTGTGCTACACAGCATCCTGTAAAGACAACTACTGTGTCAGGGGTCAAGGAGAGTGTGTCGAAACCATAAACAGCCATTACTGCTCATGCTTTGCGGGTTTCAATGGAACGCGATGTGAACACGtaataaaatgcaaaccaGAGGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGCAACTTCTCATATGACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGTTCCAGTACAAGAAGTTGCACTTCTACCACAGAGTGGTCGGGAATACCATCAACCTGTGAATTGGTTCAATGTCCAGAGTTGATCAAACCACAGAAAGGCCATATGCAGTGCCAGCATCCCACGGGACAGTTCAGATACCAATCCacctgtgtgtttatgtgtgaagAAGGATACACACTGCGAGACTGCAGCTCTTCAACACTGTCCTGTGGGGCAAAGGGAAGCTGGAATGATTCACAACCCACTTGTGAAAtaataaaatgcaaaccaGAGGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGCAACTTCTCATATGACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGCTCCAGTACAAGAAGTTGCACTTCTACCACAGAGTGGTCGGGAATACCATCAACCTGTGAACTGGTTCAATGTCCAGAGTTGATCAAACCACAGAAAGGCCATATGCAGTGTCAGCATCCCATGGGCCAGTTCAGATACCAATCCacctgtgtgtttatgtgtgaagAAGGATACACACTGCGAGACTCCAGCTCCTCAACACTGTCCTGTGGGGCAAAGGGAAGCTGGAATGATTCACAACCCACTTGTGAAAtaataaaatgcaaaccaGAAGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGAAACTTCTCATATAACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGTTCCAGTACAAGAAGTTGCACTTCTACCACTAAATGGTCAGGCAAACCACCAACCTGTGAACTTATTCACTGCCCAGCCCTTGAAAGTCCTGTCAACGGAGAACTGAGCTGCACATCCAGCTTTAATTATGGGAGCAAATGCAGCTTCAGTTGTACTGAAGGATTCAACCTCCAGGGAGCTTCAGAGATCAGCTGTACAAAAGCAGCAAAATGGGGTCAGGAACCACCTCACTGTGAAGCAGTGCTCTGCCCACAACTTTCTGAGCCAATCAACGGGCATATGAACTGCTCATCTGAAGAACCTACCTTTGGCACCTTTTGCTTGTTCAGTTGCCAGGAAGGGCACCAACTTGAAGACCACAGTAAGAAGAGAGTGATATGCAACCACAATGGGAGCTGGTCAGGGGAAGTCGCAGTGTGTCAAGCTCATCCTGATCCCACTGCATTGCTGCAAACAACAGAGGTGGCTCTTGGTGTTTCAGTTGCTACCTGCGCCTCTGGTCTAGGCGTACTCCTCTGGATATTGAAAAGACTGAGGAGAAAAGGTAAAAATTTTGAACTGAACAGtacCATGGATTTTGACGATCCTCCACAGTTTTATAAGAACAGTGTTGACAGTCTCATATAGAACAAAATAGCATCATATAGCATACAGCATATGTTCCTCATGAATATATACAGCCAGTATGTGTAATTATAGCGATGTAACTTATTCCAGTGAACAATTTAGTGAAAAACTTATTCTTACAACTGCCTCACAGTACATAAACATGTcatcaaaaatgatttaagGCACTTGTATATTTTCATGCTCAGTCTTTCAGGCATTATCAGTTACTAGCCAGAAGTCCTGAATGTGATTTGTTTCTTCCCAACGGAAGCTTTTATGATTTACTTGACTGAACATATTGTTCTGTATAAATGTACTAGTTTTTATgctattaatacataataatatctTTTTCTACTATTTATTGTTCCAAAACTGTATTGGTcctattaaactatttttacatgCCATCCATTAAAGTGTGTTTATGAGACAA
>XM_043219096.1
CCGGGAAGGGATGTTCCAAGCCATAGCAGAGCTCCTATATAAATGCCCCAGAGGATGATTACCAGACCAGATTCTCAAATCAGACCATTATATTAGTAGAGAAGTACACAGACGACCATTAAGAGGACCATTTTATAGTTGTACATCCATGACAATGGGCATCTTCAACAAAGTACCATTGAAATTTTTAGCTGCCATTGTTCTTATTTCTTCAGTGTTAAACTTATGGAGAGGCACTGAAGGCTGGTCATACCATTCTTCAAAAACCACTATGAACTGGGAATCTGCCAGACGCTGGTGCAGGCAGTATTACACCGACATGGTAGCCATCCAGAATAAAAAAGAGATTGACCACCTCAATGATGCTTTACCAAAAGTTCATGGATATTACTGGATTGGCATTCGTAAAATTAATGGCTCTTGGACCTGGGTGGGAACTAATAAGACACTTACAAAGGAAGCTGAAAACTGGGCATATAAAGAGCCCAATAATGGAGGGAATAATGAAGACTGTGTggaaatatacattaaaaggGAGAAAGATGAAGGAAAATGGAATGATGAGTCCTGCTTAAAGAAGAAGACTGCACTGTGCTACACAGCATCCTGTAAAGACAACTACTGTGTCAGGGGTCAAGGAGAGTGTGTCGAAACCATAAACAGCCATTACTGCTCATGCTTTGCGGGTTTCAATGGAACGCGATGTGAACACGtaataaaatgcaaaccaGAGGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGAAACTACTCATATGACTCTAAGTGTGAATATTCATGCGAAGAAGGTTATGAACTAAAGGGCTCCAGTACAAGAAGTTGCACTTCTACCACAGAGTGGTCGGGAATACCATCAACCTGTGAATTGGTTCAATGTCCAGAGTTGATCAAACCACAGAAAGGCCATATGCAGTGCCAGCATCCCACGGGACAGTTCAGATACCAATCCacctgtgtgtttatgtgtgaagAAGGATACACACTGCGAGACTGCAGCTCTTCAACACTGTCCTGTGGGGCAAAGGGAAGCTGGAATGATTCACAACCCACTTGTGAAAtaataaaatgcaaaccaGAGGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGCAACTTCTCATATGACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGCTCCAGTACAAGAAGTTGCACTTCTACCACAGAGTGGTCGGGAATACCATCAACCTGTGAACTGGTTCAATGTCCAGAGTTGATCAAACCACAGAAAGGCCATATGCAGTGTCAGCATCCCATGGGCCAGTTCAGATACCAATCCacctgtgtgtttatgtgtgaagAAGGATACACACTGCGAGACTCCAGCTCCTCAACACTGTCCTGTGGGGCAAAGGGAAGCTGGAATGATTCACAACCCACTTGTGAAAtaataaaatgcaaaccaGAAGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGAAACTTCTCATATAACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGTTCCAGTACAAGAAGTTGCACTTCTACCACTAAATGGTCAGGCAAACCACCAACCTGTGAACTTATTCACTGCCCAGCCCTTGAAAGTCCTGTCAACGGAGAACTGAGCTGCACATCCAGCTTTAATTATGGGAGCAAATGCAGCTTCAGTTGTACTGAAGGATTCAACCTCCAGGGAGCTTCAGAGATCAGCTGTACAAAAGCAGCAAAATGGGGTCAGGAACCACCTCACTGTGAAGCAGTGCTCTGCCCACAACTTTCTGAGCCAATCAACGGGCATATGAACTGCTCATCTGAAGAACCTACCTTTGGCACCTTTTGCTTGTTCAGTTGCCAGGAAGGGCACCAACTTGAAGACCACAGTAAGAAGAGAGTGATATGCAACCACAATGGGAGCTGGTCAGGGGAAGTCGCAGTGTGTCAAGCTCATCCTGATCCCACTGCATTGCTGCAAACAACAGAGGTGGCTCTTGGTGTTTCAGTTGCTACCTGCGCCTCTGGTCTAGGCGTACTCCTCTGGATATTGAAAAGACTGAGGAGAAAAGGTAAAAATTTTGAACTGAACAGtacCATGGATTTTGACGATCCTCCACAGTTTTATAAGAACAGTGTTGACAGTCTCATATAGAACAAAATAGCATCATATAGCATACAGCATATGTTCCTCATGAATATATACAGCCAGTATGTGTAATTATAGCGATGTAACTTATTCCAGTGAACAATTTAGTGAAAAACTTATTCTTACAACTGCCTCACAGTACATAAACATGTcatcaaaaatgatttaagGCACTTGTATATTTTCATGCTCAGTCTTTCAGGCATTATCAGTTACTAGCCAGAAGTCCTGAATGTGATTTGTTTCTTCCCAACGGAAGCTTTTATGATTTACTTGACTGAACATATTGTTCTGTATAAATGTACTAGTTTTTATgctattaatacataataatatctTTTTCTACTATTTATTGTTCCAAAACTGTATTGGTcctattaaactatttttacatgCCATCCATTAAAGTGTGTTTATGAGACAA
>XM_043219097.1
CCGGGAAGGGATGTTCCAAGCCATAGCAGAGCTCCTATATAAATGCCCCAGAGGATGATTACCAGACCAGATTCTCAAATCAGACCATTATATTAGTAGAGAAGTACACAGACGACCATTAAGAGGACCATTTTATAGTTGTACATCCATGACAATGGGCATCTTCAACAAAGTACCATTGAAATTTTTAGCTGCCATTGTTCTTATTTCTTCAGTGTTAAACTTATGGAGAGGCACTGAAGGCTGGTCATACCATTCTTCAAAAACCACTATGAACTGGGAATCTGCCAGACGCTGGTGCAGGCAGTATTACACCGACATGGTAGCCATCCAGAATAAAAAAGAGATTGACCACCTCAATGATGCTTTACCAAAAGTTCATGGATATTACTGGATTGGCATTCGTAAAATTAATGGCTCTTGGACCTGGGTGGGAACTAATAAGACACTTACAAAGGAAGCTGAAAACTGGGCATATAAAGAGCCCAATAATGGAGGGAATAATGAAGACTGTGTggaaatatacattaaaaggGAGAAAGATGAAGGAAAATGGAATGATGAGTCCTGCTTAAAGAAGAAGACTGCACTGTGCTACACAGCATCCTGTAAAGACAACTACTGTGTCAGGGGTCAAGGAGAGTGTGTCGAAACCATAAACAGCCATTACTGCTCATGCTTTGCGGGTTTCAATGGAACGCGATGTGAACACGtaataaaatgcaaaccaGAGGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGCAACTTCTCATATGACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGTTCCAGTACAAGAAGTTGCACTTCTACCACAGAGTGGTCGGGAATACCATCAACCTGTGAATTGGTTCAATGTCCAGAGTTGATCAAACCACAGAAAGGCCATATGCAGTGCCAGCATCCCACGGGACAGTTCAGATACCAATCCacctgtgtgtttatgtgtgaagAAGGATACACACTGCGAGACTGCAGCTCTTCAACACTGTCCTGTGGGGCAAAGGGAAGCTGGAATGATTCACAACCCACTTGTGAAAtaataaaatgcaaaccaGAGGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGCAACTTCTCATATGACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGCTCCAGTACAAGAAGTTGCACTTCTACCACAGAGTGGTCGGGAATACCATCAACCTGTGAACTGGTTCAATGTCCAGAGTTGATCAAACCACAGAAAGGCCATATGCAGTGTCAGCATCCCATGGGCCAGTTCAGATACCAATCCacctgtgtgtttatgtgtgaagAAGGATACACACTGCGAGACTCCAGCTCCTCAACACTGTCCTGTGGGGCAAAGGGAAGCTGGAATGATTCACAACCCACTTGTGAAAtaataaaatgcaaaccaGAAGACGTTACCCCACCAGATCATGCTAGCGTCAAGTGCACTCATCCTTATGGAAACTTCTCATATAACTCTAAGTGTGAATATTCATGTGAAGAAGGTTATGAACTAAAGGGTTCCAGTACAAGAAGTTGCACTTCTACCACTAAATGGTCAGGCAAACCACCAACCTGTGAACTTATTCACTGCCCAGCCCTTGAAAGTCCTGTCAACGGAGAACTGAGCTGCACATCCAGCTTTAATTATGGGAGCAAATGCAGCTTCAGTTGTACTGAAGGATTCAACCTCCAGGGAGCTTCAGAGATCAGCTGTACAAAAGCAGCAAAATGGGGTCAGGAACCACCTCACTGTGAAGCAGTGCTCTGCCCACAACTTTCTGAGCCAATCAACGGGCATATGAACTGCTCATCTGAAGAACCTACCTTTGGCACCTTTTGCTTGTTCAGTTGCCAGGAAGGGCACCAACTTGAAGACCACAGTAAGAAGAGAGTGATATGCAACCACAATGGGAGCTGGTCAGGGGAAGTCGCAGTGTGTCAAGCTCATCCTGATCCCACTGCATTGCTGCAAACAACAGAGGTGGCTCTTGGTGTTTCAGTTGCTACCTGCGCCTCTGGTCTAGGCGTACTCCTCTGGATATTGAAAAGACTGAGGAGAAAAGGTAAAAATTTTGAACTGAACAGtacCATGGATTTTGACGATCCTCCACAGTTTTATAAGAACAGTGTTGACAGTCTCATATAGAACAAAATAGCATCATATAGCATACAGCATATGTTCCTCATGAATATATACAGCCAGTATGTGTAATTATAGCGATGTAACTTATTCCAGTGAACAATTTAGTGAAAAACTTATTCTTACAACTGCCTCACAGTACATAAACATGTcatcaaaaatgatttaagGCACTTGTATATTTTCATGCTCAGTCTTTCAGGCATTATCAGTTACTAGCCAGAAGTCCTGAATGTGATTTGTTTCTTCCCAACGGAAGCTTTTATGATTTACTTGACTGAACATATTGTTCTGTATAAATGTACTAGTTTTTATgctattaatacataataatatctTTTTCTACTATTTATTGTTCCAAAACTGTATTGGTcctattaaactatttttacatgCCATCCATTAAAGTGTGTTTATGAGACAA

Function

GO: NA

KEGG:

id description
K06496 SELP, CD62P; selectin, platelet

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219095.1 False 2657 mRNA 0.42 15 17603658 17608945
XM_043219096.1 False 2657 mRNA 0.42 14 17603658 17608945
XM_043219097.1 True 2657 mRNA 0.42 15 17603658 17608945

Neighbor

gene id symbol gene type direction distance location
LOC122324572 NA coding downstream 1233 17597393 ~ 17602425 (-)
LOC122324570 LOC107579823 coding downstream 7672 17586384 ~ 17595986 (-)
atf6 atf6,LOC107555632,LOC107698395,LOC107710557,LOC107726471,LOC107601246,LOC107696152 coding downstream 48711 17523618 ~ 17554947 (-)
fam102bb fam102bb,fam102b,LOC107555630,LOC107698400,LOC107696175,LOC107601256 coding downstream 88178 17499479 ~ 17515480 (-)
rock2b LOC107555625,LOC107698402,LOC107696174,LOC107726463,LOC107726633 coding downstream 122124 17455737 ~ 17481534 (-)
scyl3 scyl3,LOC107698387,LOC107726436,LOC107599096,LOC107732421,LOC107553510,LOC107696147 coding upstream 20486 17629431 ~ 17635856 (-)
tprb LOC107732389,LOC107553507,LOC107696139,LOC107599094 coding upstream 36033 17644978 ~ 17662064 (-)
pdcb pdcb,LOC107553506,LOC107698383,LOC107732392,LOC107726497,LOC107696164,LOC107599093 coding upstream 54557 17663502 ~ 17666366 (-)
ptgs2b ptgs2b,LOC107732418,LOC107698381,LOC107553505,LOC107599092,LOC107726413,LOC107696154 coding upstream 70258 17679203 ~ 17682955 (-)
hmcn1 hmcn1,LOC107732365,LOC107698379,LOC107726475,LOC107696172,LOC107553432 coding upstream 95973 17704918 ~ 17772741 (-)
LOC122324574 NA non-coding downstream 44188 17555855 ~ 17559470 (-)
LOC122324490 NA non-coding downstream 194163 17396342 ~ 17409495 (-)
G139323 NA non-coding downstream 207660 17394864 ~ 17395998 (-)
G139317 NA non-coding downstream 267338 17336007 ~ 17336320 (-)
G139302 NA non-coding downstream 477748 17125437 ~ 17125910 (-)
G139386 NA non-coding upstream 6203 17615148 ~ 17615699 (-)
G139387 NA non-coding upstream 6848 17615793 ~ 17616508 (-)
G139565 NA non-coding upstream 180253 17789198 ~ 17794072 (-)
G139567 ivns1abpa,LOC107696153,LOC107726450,LOC107732388,LOC107553504,LOC107683098,LOC107599089 non-coding upstream 186539 17795484 ~ 17799866 (-)
G139590 NA non-coding upstream 279623 17888568 ~ 18180187 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 175535 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1141442 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 1236859 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1498931 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 1610013 15990149 ~ 15993645 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 192457 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 734518 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 797082 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 1645789 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 1652521 19261466 ~ 19262952 (-)

Expression


Co-expression Network