LOC122324572


Basic Information

Item Value
gene id LOC122324572
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 17597393 ~ 17602425 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219105.1
CCGAGCAAAAGAGACTTTATGTGAGGACAGACTGCTGAAGTGCTACCAGAGCTGCGATGAACAATATTCTATTAACAAGTGACTCCGTCGCGAGGAGACTAAAGAGAACCATGGCTGGAGGTAAAGCAACATCTGTGCACAAAGTTTTGATTCATCTCTGGTTCATTTTGGTCAGTGTTGAAGGATGGACATATCATTGGACAAAGGACGAGACAATGTCATGGAATGAGACGAGAGAATGGTGTAAAAATCGTTACACAGACATTGTGATGGTCCACAATGAAAATGTAactaattttcttaaaaaatctATGGAAACGATAACATCTCCCTACTACTGGATTGGACTGAAAAAGAACGAACACACTTGGATTTGGGTTGCCAATGGACAAACTGTGAAATATCTAAACTGGGCACCCAACGAGCCCAACAACAAGTCTGATGAAAAATGTGTGGAATTATATATCACCAAAGAAACACATAGTGGACAGTGGAACGATGAAAACTGTCAATCGAGAAAGCATCCTTTATGCCAAAAAGCACACTGTCTAAATGACACATGCACTGATAGAGAAGACTGCATAGAGGAAGTCAACAACTTTACATGTGTGTGCAAACCAGGTTTCTCTGGGCCAAAGTGTGAAACAGtcGTTTCATGTGATCCGCTCTCTGTACCACTACATGGCAGGATGAATTGCTCCGGTCTGTTTGGGAATCATTCCCTCAACTCAAGCTGTACATTTTCTTGTGCTGGTGATTATAAACTGGAGGGTACAGCTGAGCTCATATGCAGTTCCTCCGGTTCATGGAATGCGCCGCCACCTTCATGTGCAGCGGAGTGTTTTCCTGTTCTCATGTTTGGTGGTGGATTGATGAACTGCACTGAAGGACATGACAGTAAAAGATCTGCCTGTAGCGTACAGTGTCCACCTGGACATGTGCTGCTAGGTTTTGTTGAGTTCACCTGCAGAGCTGATGGCACATGGGAGTCTTCATTTCCACTAATGTGTGCAAGTTATGTCCATTTTCTGTTTGCTCTTTTGGTATCTGTTGTCATCTCAGTGTTTTGtggctgtttattttgttggtcCAAGTGCAGTCAGAgTAAAAGTGCAGTAAGATTAAGAACTCCACAAGAAACGGTGAATCAAGCCTATGGAACAGAACACGCACCACTAGAGGGCCCTCTCTGTtcagaataaacatttcttttctgcCTTTCTTGACTCGAATCTCctgttcattcttttttttttaattctggcTTTGCttgtaaaaatctgaaatagcTAGTATATGAAGTAAATCATCTCTTTGTTATCTTTGCTCAGAAATATTATATGTTGTTCATTGTTACTGTAcaacaataatttaaacattgtGA

Function

GO:

id name namespace
GO:0004055 argininosuccinate synthase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219105.1 True 1384 mRNA 0.41 9 17597393 17602425

Neighbor

gene id symbol gene type direction distance location
LOC122324570 LOC107579823 coding downstream 1407 17586384 ~ 17595986 (-)
atf6 atf6,LOC107555632,LOC107698395,LOC107710557,LOC107726471,LOC107601246,LOC107696152 coding downstream 42446 17523618 ~ 17554947 (-)
fam102bb fam102bb,fam102b,LOC107555630,LOC107698400,LOC107696175,LOC107601256 coding downstream 81913 17499479 ~ 17515480 (-)
rock2b LOC107555625,LOC107698402,LOC107696174,LOC107726463,LOC107726633 coding downstream 115859 17455737 ~ 17481534 (-)
LOC122325537 LOC107698338,LOC107555613,LOC107726610 coding downstream 141956 17453042 ~ 17455437 (-)
LOC122324568 NA coding upstream 1233 17603658 ~ 17608945 (-)
scyl3 scyl3,LOC107698387,LOC107726436,LOC107599096,LOC107732421,LOC107553510,LOC107696147 coding upstream 27006 17629431 ~ 17635856 (-)
tprb LOC107732389,LOC107553507,LOC107696139,LOC107599094 coding upstream 42553 17644978 ~ 17662064 (-)
pdcb pdcb,LOC107553506,LOC107698383,LOC107732392,LOC107726497,LOC107696164,LOC107599093 coding upstream 61077 17663502 ~ 17666366 (-)
ptgs2b ptgs2b,LOC107732418,LOC107698381,LOC107553505,LOC107599092,LOC107726413,LOC107696154 coding upstream 76778 17679203 ~ 17682955 (-)
LOC122324574 NA non-coding downstream 37923 17555855 ~ 17559470 (-)
LOC122324490 NA non-coding downstream 187898 17396342 ~ 17409495 (-)
G139323 NA non-coding downstream 201395 17394864 ~ 17395998 (-)
G139317 NA non-coding downstream 261073 17336007 ~ 17336320 (-)
G139302 NA non-coding downstream 471483 17125437 ~ 17125910 (-)
G139386 NA non-coding upstream 12723 17615148 ~ 17615699 (-)
G139387 NA non-coding upstream 13368 17615793 ~ 17616508 (-)
G139565 NA non-coding upstream 186773 17789198 ~ 17794072 (-)
G139567 ivns1abpa,LOC107696153,LOC107726450,LOC107732388,LOC107553504,LOC107683098,LOC107599089 non-coding upstream 193059 17795484 ~ 17799866 (-)
G139590 NA non-coding upstream 286143 17888568 ~ 18180187 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 169270 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 1135177 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 1230594 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 1492666 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 1603748 15990149 ~ 15993645 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 198977 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 741038 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 803602 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 1652309 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 1659041 19261466 ~ 19262952 (-)

Expression


Co-expression Network