LOC122324578 (LOC107659807,LOC107659806,LOC107756058)


Basic Information

Item Value
gene id LOC122324578
gene name LOC107659807,LOC107659806,LOC107756058
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26123353 ~ 26125448 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219109.1
AGCATCTCCACAGTGTGCCTAGCTGTTCAATTATGGCTGTAAGTTTGTTGTTTGCTGAGTTTTTAGCACTTTGTGCTCTCTGTTTTGCTGTTCCTCAGTGGAGTAATTTGCCCCAGAGTTCTCAAGCTCTGATGCTTCAAAATGCTAACCAGCAGGTTAAGCAGCTTTTTCAAcaacagccacccagccagcAGGTTCAACAGCcgcccagccagtgggttaagcagccggttcaacaacagccacccagccagtgggttaagcagccggTCCAAcaacagccacccagccagtgggttaagcagccgaTTCAAcaacagccacccagccagtgggttaagcagccgaTTCAAcaacagccacccagccagtgggttcagcagccggttcaacagcagccacccagccagtgggttaagcagccagttcaacagcagccacccagccagctGGTTCAACAACCTAACCAGCAGTTTCCACTTCAGAAGCCAGTGGCACAGACAGAGCCCATTGATAAGTGTACTGTAGCTGATTATGATCAGATCCCATGTGGACAACCTGGGATCAGTGGTGCTGAGTGTAACGCTATCAACTGCTGCTTTGATGGGCAGCAATGCTTCTATGGAAGGGCAGTGACTGTCCAGTGTATTCGAGATGGTCAGTTTGTGGTAGTGGTGGCTAGAGATGTTACTGTGCCTCAACTGAGTCTGGATTCGGTTCGTCTACTGGGTGGAAGTGACCCGCCTTGCGCTCCTGTGGATTCCACACCTTCCTTTGCTATATACCAGTTCCCTGTGACCGCATGTGGCACGAGTATGATGGAGGACAGTGGATATGTGGTGTATGAGAACAGAATGACCTCCTCATACGAAGTTGGCGTTGGACCACTTGGATCCATCACGAGGGACAGTCACTTTGAGCTTCTCTTCCAGTGCAGATACTCTGGAACATCTGTGGAAGCTCTGGTTGTGGAGGTCAACTCtgttcctccacctccacctgtAGCTGCTCCTGGACCTCTCAGGGTGGAGCTCAGACTGGCCAATGGCCAGTGTGTCACCAAGGGCTGTGCTGAAGGGGATGAGGCCTACACGTCCTACTACAGTGACGCTGATTATCCCGTCACAAAAGTCCTGCGGGAGCCTGTGTATGTTGAAGTGCACATTATGGAGAGGACTGACCCCAACATTGTCCTGATGCTGGGACATTGCTGGGCGACCTCCACATCCAGTCCACTCAGTCTGCCCCAGTGGGACCTTCTGATTGATGGATGCCCTTACCAGGATGACCGTTATCTGACCACGCTGGTTCCAGTAACTGGATCATCTGGTGTGCAGTTCCCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAGCCTCACTGGCTCCTCTGCAGGAAACGATCTTCATCCACTGCAGTACAGCGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCGCCAGGAAACGAAGAGACACCCGTGTCGAGGCTCTCGCTAGTCAGCAGACTGTGGTTTCTAGTGGAGAAGTTACTCTGGTCAtgtgaatgtaatatttaataaactttgGACCACAAA

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG:

id description
K19926 ZP1; zona pellucida sperm-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219109.1 True 1599 mRNA 0.52 8 26123353 26125448

Neighbor

gene id symbol gene type direction distance location
LOC122324575 LOC107659807,LOC107756058,LOC107659806 coding downstream 9629 26111476 ~ 26113724 (-)
LOC122324579 LOC107756053,LOC107659807,LOC107756058,LOC107659806 coding downstream 20130 26101333 ~ 26103223 (-)
cipcb NA coding downstream 35383 26083089 ~ 26087970 (-)
znf410 LOC107659809,LOC107712212,LOC107550151 coding downstream 43807 26072405 ~ 26079546 (-)
lrfn5b lrfn5b,LOC107659815,LOC107564320,LOC107712211,LOC108411613,LOC108257655 coding downstream 73586 26036394 ~ 26049767 (-)
LOC122324577 LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860 coding upstream 7112 26132560 ~ 26134793 (-)
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding upstream 15000 26140448 ~ 26144419 (-)
LOC122325523 LOC107659807,LOC107567392,LOC107756058,LOC107659806,LOC107713860 coding upstream 24443 26149891 ~ 26152523 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding upstream 33718 26159166 ~ 26163051 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding upstream 43086 26168534 ~ 26176070 (-)
G142247 NA non-coding downstream 46280 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 67788 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 90155 26017371 ~ 26033198 (-)
G142261 NA non-coding downstream 111105 26010650 ~ 26012248 (-)
G142260 NA non-coding downstream 112965 26006269 ~ 26010388 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding upstream 24443 26149891 ~ 26174879 (-)
G142282 NA non-coding upstream 64615 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 104858 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 142464 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 144189 26269637 ~ 26270044 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 26382 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 68884 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 369345 25747667 ~ 25754008 (-)
G142058 NA other downstream 473260 25648492 ~ 25650093 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other downstream 745937 25326508 ~ 25377416 (-)
G142281 NA other upstream 60212 26185660 ~ 26187919 (-)
G142278 NA other upstream 106576 26232024 ~ 26234245 (-)
rps29 NA other upstream 357873 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 797367 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1104355 27229803 ~ 27257482 (-)

Expression


Co-expression Network