LOC122324579 (LOC107756053,LOC107659807,LOC107756058,LOC107659806)


Basic Information

Item Value
gene id LOC122324579
gene name LOC107756053,LOC107659807,LOC107756058,LOC107659806
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26101333 ~ 26103223 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219110.1
GCATCTCCACAGTGTGCCTAGCTGTTCAATCATGGCTGTAAGTTTGTTGTTGGCTGAGCTTTTAGCACTTTGTGCTCTCTGTTGTGCTTTTCCTCAGTGGAGTAATTTGCCCCAGAGTTCTCAAACTCTGATGCTTCAAAATGCTAACCAGCAGGTtaagcagccggttcaacaACAGCCACCGAGCCAGTGGGTTCagcagccggttcaacagcagccacccagccagctGGTTCAACAACCTAACCAGCAGTTTCCCCTTCAGAAGCCAGTGGCACAGACAGAGCCCATTGATAAGTGTACTGTAGCTGATTATGATCAGATCCCATGTGGACAACCTGGGATCAGTGGTGCTGAGTGTAACGCTATCAACTGCTGCTTTGATGGGCAGCAATGCTTCTATGGAAGGGCAGTGACTGTCCAGTGTATTCGAGATGGTCAGTTTGTGGTAGTGGTGGCTAGAGATGTTACTGTGCCTCAACTGAGTCTGGATTCGGTTCGTCTACTGGGTGGAAGTGACCCACCTTGTGCTCCTGTGGATTCCACACCTTCCTTTGCTATATACCAGTTCCCTGTGACCGCATGTGGCACGAGTATGATGGAGGACAGTGGATATGTGGTGTATGAGAACAGAATGACCTCCTCATACGAAGTTGGCGTTGGACCACTTGGATCCATCACGAGGGACAGTCACTTTGAGCTTCTCTTCCAGTGCAGATACTCTGGAACATCTGTGGAAGCTCTGGTTGTGGAGGTCAATTCtgttcctccacctccaccagtAGCTGCTCCTGGACCTCTCAGGGTGGAGCTCAGACTGGCCAATGGCCAGTGTGTCACCAAGGGCTGTGCTGAAGGGGATGAGGCCTACACGTCCTACTACAGTGACGCTGATTATCCCGTCACAAAAGTCCTGCGGGAGCCCGTGTATGTTGAAGTGCACATTATGGAGAGGACAGACCCCAACATTGTCCTGATGCTGGGACATTGCTGGGCCACCTCCACCTCCAGTCCACTCAGTCTGCCCCAGTGGGACCTTCTGATTGATGGATGCCCTTACCAGGATGACCGTTATCTGACCACGCTGGTTCCAGTAACTGGATCATCTGGTGTGCAGTTCCCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAACCTCACTGGCTCCTCTGCAGGAAACGATCTTCATCCACTGCAGTACAGCGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCGCCAGGAAACGAAGAGCTATTGCTGTGACAACTGACAGTGCTGTGGTTTCTAGTGGAGAAATGAGACTGATTCCATGACtgcacaacattttaataaactattaaagaccttaaa

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219110.1 True 1376 mRNA 0.51 8 26101333 26103223

Neighbor

gene id symbol gene type direction distance location
cipcb NA coding downstream 13363 26083089 ~ 26087970 (-)
znf410 LOC107659809,LOC107712212,LOC107550151 coding downstream 21787 26072405 ~ 26079546 (-)
lrfn5b lrfn5b,LOC107659815,LOC107564320,LOC107712211,LOC108411613,LOC108257655 coding downstream 51566 26036394 ~ 26049767 (-)
magl NA coding downstream 124505 25963983 ~ 25976828 (-)
LOC122324391 LOC107712205,LOC107564326,LOC107659794 coding downstream 141631 25944134 ~ 25959702 (-)
LOC122324575 LOC107659807,LOC107756058,LOC107659806 coding upstream 8253 26111476 ~ 26113724 (-)
LOC122324578 LOC107659807,LOC107659806,LOC107756058 coding upstream 20130 26123353 ~ 26125448 (-)
LOC122324577 LOC107659807,LOC107756058,LOC107659806,LOC107567390,LOC107713860 coding upstream 29337 26132560 ~ 26134793 (-)
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding upstream 37225 26140448 ~ 26144419 (-)
LOC122325523 LOC107659807,LOC107567392,LOC107756058,LOC107659806,LOC107713860 coding upstream 46668 26149891 ~ 26152523 (-)
G142247 NA non-coding downstream 24260 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 45768 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 68135 26017371 ~ 26033198 (-)
G142261 NA non-coding downstream 89085 26010650 ~ 26012248 (-)
G142260 NA non-coding downstream 90945 26006269 ~ 26010388 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding upstream 46668 26149891 ~ 26174879 (-)
G142282 NA non-coding upstream 86840 26190063 ~ 26191918 (-)
G142280 NA non-coding upstream 127083 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 164689 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 166414 26269637 ~ 26270044 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 4362 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 46864 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 347325 25747667 ~ 25754008 (-)
G142058 NA other downstream 451240 25648492 ~ 25650093 (-)
mettl24 LOC107738893 other downstream 692558 25294844 ~ 25408775 (-)
G142281 NA other upstream 82437 26185660 ~ 26187919 (-)
G142278 NA other upstream 128801 26232024 ~ 26234245 (-)
rps29 NA other upstream 380098 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 819592 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1126580 27229803 ~ 27257482 (-)

Expression


Co-expression Network