jun (jun,LOC107712863,LOC107581481,LOC107739852)


Basic Information

Item Value
gene id jun
gene name jun,LOC107712863,LOC107581481,LOC107739852
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7998591 ~ 8000531 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219113.1
GCTGGAGAAGCTCAGAGTATACAGATCTCGCCACGGCGAAACATCTAGGCAAGGCAGCCCGagctaaaataaacaagaaaactTTTTCGGCTGAGCGCCGTCTGTCCGCTATCCTCTTTGAGACGCCGCGGAGGGAGAAGAGCGCTCTGTCCgcgagaagaagaagaagaagagttCGGGGCGCTGCGCGGTAACTTTTACGCAATGGAAACTACTTTCTACGATGACTCTCTAAACAGCGCTTTCTCTCAGCATGACAGCGCTGCTTTCGGATACAACCACAAGGCTCTGAAACACAACATGACGCTGAATCTGACCGACCCGGCCGGCAACCTGAAGCCCCACCTGAGGGCCAAAGCCAACGACATCCTCACCTCCCCGGACGTGGGGCTGCTCAAGCTGGCTTCGCCCGAGCTGGAGCGGCTCATCATCCAGTCCAGCAACGGCCTGATCACCACGACGCCCACTCCGACCCAGTTCCTGTGTCCCAAGAACGTGACGGACGAGCAGGAGGGCTTCGCGGAGGGCTTCGTGAGGGCGCTGGCCGAGCTGCACCACCAGCACATGCCCAGCGTCACCTCGGCTCCCCAGACGACCATCAACAGCAGCATGGCACCCGTTTCGTCCATGGCGGGCGGCGCGGCGTACAGCTCCTCCATGCGCTCCGACCCTCCCGTGTACGCGGACCTGAACACGTTCAACCCCGCCATCGGCGCCGCCAACCCCCCGATGAACTACAGCGGCGCCCCGCCGCAGCACGCCGTCCAGCACCCGCGGCTTCAGGCGCTGAAGGAGGAGCCCCAAACGGTGCCCGAGATGCCCGGCGAGACGCCGCCCCTCTCCCCCATCGACATGGAGAGCCAGGAGCGGATTAAAGCCGAGAGGAAGCGCATGAGGAACCGCATCGCCGCCTCCAAATGCCGAAAGAGGAAACTGGAGAGGATCTCCCGGCTGGAGGACAAAGTCAAGACCCTCAAGTCCCAGAACTCCGAGCTGGCGTCCACCGCGAACATGCTGCGCGAGCAAGTGGCCCAGCTCAAGCAGAAAGTCATGAACCACGTCAACAGCGGCTGCCAGCTCATGTTGACGCAACAGCTGCAGACTTTCTGAGAAGAGCCGAAGGACGTTTGAGTTCACTTTAATAGACGCGAGGGACACGGTTCGGGGGCCGGACGTCTGCGAGCCGGCGCGAGCCCGCTGGGACCGGGAGCGTCCGGCCGGCCGCCTGCCGAAAAAAGGATGCTCCGACTGGACTTTTGGGAAGTGCAAAACTTCAAGAGCTCGGTCCGACAGAGACAGAGGGCATGAGACTCGCTCTGTTACACGCTTTACTTTCTGACGAGAAAAGAGACTTCTCCTTGTTCACTTCGACCAGGTCGTGCATGGACCCATACGCTTCAGAGGAGCGCTCAGTATTATAGGAGGAACACGGGGGACGATGGGGATATACATGTCCGGCTCACCGAGCAGGAAGCTGTGTCCGCTAAACTTTTGATAAAAGCTGCCTGACTTCTGAGTTACACGTTGTACTTTTTGTTCTTAAACTGAATGGAATTGACTTTTTCTTTGAGTTAGTCCAGCTTCAgcggtttcttttttttctgaaaaagttCATTAATGAGGTTTCACTCATTGTTATGTGTAAATAGGATCAACCGGGAGTACTTAAGTTTACCATTTGTAAGTAAagtacaatataattttttatgttcgTTTTCTGAGCACCTCAGAAACTAATCGATATTTatgaactgtaataaaatatgtgaaacGAAAA

Function

symbol description
jun Enables DNA-binding transcription factor activity, RNA polymerase II-specific. Contributes to DNA-binding transcription factor activity and beta-catenin binding activity. Involved in regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including hematopoietic progenitor cell differentiation; response to cadmium ion; and response to methylmercury. Part of transcription regulator complex. Is expressed in several structures, including digestive system; hematopoietic system; mesoderm; musculature system; and sensory system. Human ortholog(s) of this gene implicated in pulmonary tuberculosis. Orthologous to human JUN (Jun proto-oncogene, AP-1 transcription factor subunit).

NR:

description
transcription factor AP-1

GO:

id name namespace
GO:0060070 canonical Wnt signaling pathway biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0046686 response to cadmium ion biological_process
GO:0051597 response to methylmercury biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0008013 beta-catenin binding molecular_function

KEGG:

id description
K04448 JUN; transcription factor AP-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219113.1 True 1777 mRNA 0.56 2 7998591 8000531

Neighbor

gene id symbol gene type direction distance location
LOC122324580 si:dkey-86e18.2,LOC107658157,LOC107739861,LOC107597817 coding downstream 2153 7992597 ~ 7996438 (-)
si:dkey-86e18.1 LOC107739858,LOC107658158,LOC107597818,LOC102784436,LOC103354166,LOC102300794 coding downstream 6282 7985891 ~ 7992309 (-)
faslg LOC107581522,LOC107669138,LOC107712839 coding downstream 15541 7980679 ~ 7983050 (-)
angptl1a angptl1,angptl1a,LOC107669140,LOC107712858,LOC107658173,LOC107739855 coding downstream 124020 7857022 ~ 7874571 (-)
LOC122324531 foxn3,LOC107680774,LOC107755777,LOC107751738,LOC107583483 coding downstream 378017 7608132 ~ 7620574 (-)
prdx6 prdx6,LOC107712864,LOC107597803 coding upstream 129821 8130352 ~ 8135031 (-)
myoc myoc,LOC107669152,LOC107581474,LOC107712866,LOC107697243,LOC107733809 coding upstream 250921 8251452 ~ 8257991 (-)
vamp4 vamp4,LOC107712870,LOC107733808 coding upstream 261227 8261758 ~ 8271223 (-)
itpa itpa,LOC107712840 coding upstream 283511 8284042 ~ 8287245 (-)
tmed5 tmed5,LOC107733818,LOC107597813,LOC107712842,LOC107581519,LOC108415774 coding upstream 336076 8336607 ~ 8340950 (-)
G136804 NA non-coding downstream 86027 7912148 ~ 7912564 (-)
G136792 NA non-coding downstream 105266 7890258 ~ 7893325 (-)
G136763 NA non-coding downstream 216358 7677116 ~ 7782233 (-)
G136772 LOC107721802,LOC107712829,LOC107658155,LOC107669132 non-coding downstream 226760 7669580 ~ 7771831 (-)
LOC122325257 NA non-coding upstream 153134 8153665 ~ 8182659 (-)
G136909 NA non-coding upstream 202369 8202900 ~ 8207944 (-)
G136935 NA non-coding upstream 260552 8261083 ~ 8261292 (-)
LOC122325283 NA non-coding upstream 310960 8311491 ~ 8313967 (-)
G136962 LOC107687343,LOC107581497,LOC107697261,LOC107712873,LOC107597796 non-coding upstream 374954 8375485 ~ 8637526 (-)
zyg11 zyg11,zyg11b,LOC107712854,LOC107669142,LOC107658153,LOC107721807 other downstream 199002 7785602 ~ 7799589 (-)
G136754 zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807 other downstream 302526 7693955 ~ 7696065 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other downstream 396989 7544356 ~ 7601602 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other downstream 562093 7432060 ~ 7436498 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other downstream 569309 7424836 ~ 7429282 (-)
pigc pigc,LOC107581520,LOC107669155,LOC107712841,LOC107697628,LOC107597814 other upstream 322582 8323113 ~ 8644759 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other upstream 591161 8591692 ~ 8600955 (-)
G137054 LOC107660256,LOC107566921 other upstream 818323 8818854 ~ 8819327 (-)
G137056 NA other upstream 820623 8821154 ~ 8821719 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other upstream 1255017 9255548 ~ 9283383 (-)

Expression


Co-expression Network