tpd52l1 (rnf217,tpd52l1,LOC107727670,LOC107676269,LOC107602193,LOC107675045,LOC107716996,LOC107602194,LOC107676250,LOC107675093,LOC107727644)


Basic Information

Item Value
gene id tpd52l1
gene name rnf217,tpd52l1,LOC107727670,LOC107676269,LOC107602193,LOC107675045,LOC107716996,LOC107602194,LOC107676250,LOC107675093,LOC107727644
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 20373185 ~ 20407062 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219207.1
CCCGGAAGTGGTGTAATAGTTACTCGCTCTATGTTTAGTTTGTGAGTTTGAAAGcggactgtgtgtgttttcgcGCAAATGGAAAGTTGACCGCTCGGGAATGGAAGATGAGTCTTCCGTGCGTGTGAATGTCACCGCTCAAAATATGCCTGGTTATACCGGACGCGACGGGGAATCTGTCCATGTATCCAGCGGGACGCGGAGCACTGATTTCGGCCGGGATGTCCGCAGCAGCGACGCGAAGGTGCCATCATCATTGTCGTTATCCTCGAAGGATGTTTTGGAATttcataaacacaaacacgaaCCAGGAGGCAATAGCGAGAGGGAAAACATAAGAGCCGTTGACATTTTAAGGAGGAATTTTGGTTCCACTATCAGAGATCCAGAAGATCCCAAAGACCTGGAGAAAGTGGGATTTGACATCAAACTGAACGACTTGGATCATGAAAACGATGGTGAAAGGATGCAATGTAGCACAAAAAGTCTCCAACAAAACATGGAGAGCAACTCAGGATTGGGAGATCCTGATGGGAGTCATCATATTGATTATAATATTGATTTGAAGAGTGGTGAAGACTTCAGCCAGTCAAAAGAGCATGTTTACTGCACTGTATACTGTATTGCCAATGATAATTATAGGATACCTGTTGAGAAAACAACATCTGATCATGAAGCTACAtctttatcatcatcatcagatgTGCTGGTTTTACCTCCCACCGACTTGCCAAATTCAGAATTGGAGCGTGATCACTATCCAGAGCCCTATACAGTCTCCGACCTGATGCTGTCTGGATTAAACGGCTCTTATAACACTGACAACAGTTTATCTGTTGTGTTAACATGTCGTATCTGTCTCGATGACAAACAAACCGTACCGCTACACTGTtgcaaaaatgcagtttgtgAAGAATGTCTGAAAAGATACATCATCTCGCAGgttcaTGTGGGTCGGGCACACTTGGTATGTCCCATCACAGAGTGCAGTGGTTTCTTGGAAGAAGGATTGGTGATTTCGCACCTGTCCAGTGAAGAGTTGGCAAAATACAAGTACTTCTTGGAGCTGAGCAGACTGGACTCCAGCACAAAACCGTGTCCCCAGTGCAGCCTGTTTACCTCCTTGAAGGGTCATAGCCAACAGACAGCCACCAAAAGTGAACATAAGTATAAGATTCAGTGCACAAAGTGCCAGTTTGTCTGGTGTTTTAAATGCCACTCGCCCTGGCACGAAGGCCTGAAGTGTCGAGACTACAGGAAAGGAGACAAGCTGTTGCGTCACTGGGCCAGCGTCATCGAACACGGCCAGAGGAACGCTCAGAAGTGTCCACGCTGCAAGATCCACATTCAGAGAACTGAGGGCTGTGATCACATGACCTGCACGCAGTGCAACACTAATTTCTGTTATCGTTGCGGCGAGAAGTACAGACATCTGCGCTTCTTTGGGGATCACACCTCCAACCTCAGCGTGTTTGGATGCAAGTACCGCTACCTGCCTGAGAAACCCCATCTGCGCCGGCTGGTCCGAGGCTCTGTTTGTAGTTTATTGGACAAAGAGCCTCTAAAGGAAGTGGACGAGGATATGGTGTCAGAGGTGGATCTCAACAACACTGTCACAGAAGAGGAGCGAGAGGAAATGGAGAATGAACTGATTAAGTTAGAAGAGGAAATCACTACTTTGAAACAAGTGCTAGCCTCCAAAGAAAAGCGTCACTTGGAGCTGAAGCAGAAACTGGGGATCACTCCCCTGAGTGAACTGAGACAGAACTTCTCCAAGAGCTGGTACGACATGCAGACCAGCACAGCATACAAAAAGACTTCTGAGACACTGAGCACGGCAGGACAGAGGACCTCGGCGGCCTTCAGTAACCTGGGCAATGTCATCACCAGGAAGTTTGGCGATATGAGGTCATATTCTCTTGGCTATTCTATACGGCATTCAATGAGCATGCCCACAATGAGgaaCTCGCCTAGTTTCAAGTCTTTTGAGGAGAAAGTCGAAAGCACAGTTTCAAACATTAAGTCAAAGGTTGGAGGAACAGGAGGTGCGGGGAGTTTTGAAGAGGTCCTGTCTTCAGCGGCCCAAGCCAGCGCCCAGGACACCCCTACTAATAATGTGACTGAGAACAGTGAGCGCTAAGGGTTTCAATGGTCCACCAGTGGAACTCTGATGACCCCTAGTGGTTTGGAGACCGCAGTGAAATTTGCACAGGGGGCCCTAACACGGTAATACATGCCTTCAGATGCGTGTTTGTGGATTATCTGTGCACGGGAGGAAAAAACAACCAAGTGGAGCCTGTTTATTCTTTAAGTTCTTTTcgaaatatgtatatttttcgAGGATATTGTCTATGGTGTAGTCCTGCGTTACTTCGTTACTATCATTATTTATACTAACTCAACTTTGTTTAACTGTAACAAAGCATGATACATATCCAGGACCAAAAAGAATCGCTGCGTATACAATCCCAAGAGAAGTACTTGAAAGAATGTTTAACAAAATAGACATTAGTCTTTGTTTTTCCTGTCATGAATGAGTCAACGCTCACATTCCTGTTAACTAGAGTGCGTAAAAAATGAGGATTTACATTTTACTTGCTTGATCTGATACGTCTGATGTAAACCGTAATGTATCGGATGATAATTGTCACTGACCAAAAATGTATAGCTTTGtatcctgtttttttctttcgtaCATACGTGTGAAATTTGTTGCAGCTTTACATGTTTAACACTGACAGTGAAGTCAGGTGttgttttaagattttatagCCGAAATCTTTCTTCAAATTCATACTCAGTGTTGAGCTGCCGTTCATTAATATTGTTAGTcattaaacgtttttttttttgcaaagtcaCAAAGTCCCGGCTCATCAGTCGTGAAATTAAGGTGATCTGAACCATAATAAGAGAccataaaatgaacattaattttACTGTTACTTTGTCAGTAAAAGGGTAAAGCATGGCAgagt
>XM_043219209.1
CCCGGAAGTGGTGTAATAGTTACTCGCTCTATGTTTAGTTTGTGAGTTTGAAAGcggactgtgtgtgttttcgcGCAAATGGAAAGTTGACCGCTCGGGAATGGAAGATGAGTCTTCCGTGCGTGTGAATGTCACCGCTCAAAATATGCCTGGTTATACCGGACGCGACGGGGAATCTGTCCATGTATCCAGCGGGACGCGGAGCACTGATTTCGGCCGGGATGTCCGCAGCAGCGACGCGAAGGTGCCATCATCATTGTCGTTATCCTCGAAGGATGTTTTGGAATttcataaacacaaacacgaaCCAGGAGGCAATAGCGAGAGGGAAAACATAAGAGCCGTTGACATTTTAAGGAGGAATTTTGGTTCCACTATCAGAGATCCAGAAGATCCCAAAGACCTGGAGAAAGTGGGATTTGACATCAAACTGAACGACTTGGATCATGAAAACGATGGTGAAAGGATGCAATGTAGCACAAAAAGTCTCCAACAAAACATGGAGAGCAACTCAGGATTGGGAGATCCTGATGGGAGTCATCATATTGATTATAATATTGATTTGAAGAGTGGTGAAGACTTCAGCCAGTCAAAAGAGCATGTTTACTGCACTGTATACTGTATTGCCAATGATAATTATAGGATACCTGTTGAGAAAACAACATCTGATCATGAAGCTACAtctttatcatcatcatcagatgTGCTGGTTTTACCTCCCACCGACTTGCCAAATTCAGAATTGGAGCGTGATCACTATCCAGAGCCCTATACAGTCTCCGACCTGATGCTGTCTGGATTAAACGGCTCTTATAACACTGACAACAGTTTATCTGTTGTGTTAACATGTCGTATCTGTCTCGATGACAAACAAACCGTACCGCTACACTGTtgcaaaaatgcagtttgtgAAGAATGTCTGAAAAGATACATCATCTCGCAGgttcaTGTGGGTCGGGCACACTTGGTATGTCCCATCACAGAGTGCAGTGGTTTCTTGGAAGAAGGATTGGTGATTTCGCACCTGTCCAGTGAAGAGTTGGCAAAATACAAGTACTTCTTGGAGCTGAGCAGACTGGACTCCAGCACAAAACCGTGTCCCCAGTGCAGCCTGTTTACCTCCTTGAAGGGTCATAGCCAACAGACAGCCACCAAAAGTGAACATAAGTATAAGATTCAGTGCACAAAGTGCCAGTTTGTCTGGTGTTTTAAATGCCACTCGCCCTGGCACGAAGGCCTGAAGTGTCGAGACTACAGGAAAGGAGACAAGCTGTTGCGTCACTGGGCCAGCGTCATCGAACACGGCCAGAGGAACGCTCAGAAGTGTCCACGCTGCAAGATCCACATTCAGAGAACTGAGGGCTGTGATCACATGACCTGCACGCAGTGCAACACTAATTTCTGTTATCGTTGCGGCGAGAAGTACAGACATCTGCGCTTCTTTGGGGATCACACCTCCAACCTCAGCGTGTTTGGATGCAAGTACCGCTACCTGCCTGAGAAACCCCATCTGCGCCGGCTGGTCCGAGGCTCTGTTTGTAGTTTATTGGACAAAGAGCCTCTAAAGGAAGTGGACGAGGATATGGTGTCAGAGGTGGATCTCAACAACACTGTCACAGAAGAGGAGCGAGAGGAAATGGAGAATGAACTGATTAAGTTAGAAGAGGAAATCACTACTTTGAAACAAGTGCTAGCCTCCAAAGAAAAGCGTCACTTGGAGCTGAAGCAGAAACTGGGGATCACTCCCCTGAGTGAACTGAGACAGAACTTCTCCAAGAGCTGGTACGACATGCAGACCAGCACAGCATACAAAAAGACTTCTGAGACACTGAGCACGGCAGGACAGAGGACCTCGGCGGCCTTCAGTAACCTGGGCAATGTCATCACCAGGAAGTTTGGCGATATGAGgaaCTCGCCTAGTTTCAAGTCTTTTGAGGAGAAAGTCGAAAGCACAGTTTCAAACATTAAGTCAAAGGTTGGAGGAACAGGAGGTGCGGGGAGTTTTGAAGAGGTCCTGTCTTCAGCGGCCCAAGCCAGCGCCCAGGACACCCCTACTAATAATGTGACTGAGAACAGTGAGCGCTAAGGGTTTCAATGGTCCACCAGTGGAACTCTGATGACCCCTAGTGGTTTGGAGACCGCAGTGAAATTTGCACAGGGGGCCCTAACACGGTAATACATGCCTTCAGATGCGTGTTTGTGGATTATCTGTGCACGGGAGGAAAAAACAACCAAGTGGAGCCTGTTTATTCTTTAAGTTCTTTTcgaaatatgtatatttttcgAGGATATTGTCTATGGTGTAGTCCTGCGTTACTTCGTTACTATCATTATTTATACTAACTCAACTTTGTTTAACTGTAACAAAGCATGATACATATCCAGGACCAAAAAGAATCGCTGCGTATACAATCCCAAGAGAAGTACTTGAAAGAATGTTTAACAAAATAGACATTAGTCTTTGTTTTTCCTGTCATGAATGAGTCAACGCTCACATTCCTGTTAACTAGAGTGCGTAAAAAATGAGGATTTACATTTTACTTGCTTGATCTGATACGTCTGATGTAAACCGTAATGTATCGGATGATAATTGTCACTGACCAAAAATGTATAGCTTTGtatcctgtttttttctttcgtaCATACGTGTGAAATTTGTTGCAGCTTTACATGTTTAACACTGACAGTGAAGTCAGGTGttgttttaagattttatagCCGAAATCTTTCTTCAAATTCATACTCAGTGTTGAGCTGCCGTTCATTAATATTGTTAGTcattaaacgtttttttttttgcaaagtcaCAAAGTCCCGGCTCATCAGTCGTGAAATTAAGGTGATCTGAACCATAATAAGAGAccataaaatgaacattaattttACTGTTACTTTGTCAGTAAAAGGGTAAAGCATGGCAgagtatttgcaaaaaaaaaattgctgctC
>XM_043219210.1
agcttttctctcttttcagcattgaataaaatcagggatgtttctttgtttgtgtcTGCAACCACCTTTAAAGTGGGCTGATGCAAACTTAATATGCCTCTACATACCGGCAgttcaTGTGGGTCGGGCACACTTGGTATGTCCCATCACAGAGTGCAGTGGTTTCTTGGAAGAAGGATTGGTGATTTCGCACCTGTCCAGTGAAGAGTTGGCAAAATACAAGTACTTCTTGGAGCTGAGCAGACTGGACTCCAGCACAAAACCGTGTCCCCAGTGCAGCCTGTTTACCTCCTTGAAGGGTCATAGCCAACAGACAGCCACCAAAAGTGAACATAAGTATAAGATTCAGTGCACAAAGTGCCAGTTTGTCTGGTGTTTTAAATGCCACTCGCCCTGGCACGAAGGCCTGAAGTGTCGAGACTACAGGAAAGGAGACAAGCTGTTGCGTCACTGGGCCAGCGTCATCGAACACGGCCAGAGGAACGCTCAGAAGTGTCCACGCTGCAAGATCCACATTCAGAGAACTGAGGGCTGTGATCACATGACCTGCACGCAGTGCAACACTAATTTCTGTTATCGTTGCGGCGAGAAGTACAGACATCTGCGCTTCTTTGGGGATCACACCTCCAACCTCAGCGTGTTTGGATGCAAGTACCGCTACCTGCCTGAGAAACCCCATCTGCGCCGGCTGGTCCGAGGCTCTGTTTGTAGTTTATTGGACAAAGAGCCTCTAAAGGAAGTGGACGAGGATATGGTGTCAGAGGTGGATCTCAACAACACTGTCACAGAAGAGGAGCGAGAGGAAATGGAGAATGAACTGATTAAGTTAGAAGAGGAAATCACTACTTTGAAACAAGTGCTAGCCTCCAAAGAAAAGCGTCACTTGGAGCTGAAGCAGAAACTGGGGATCACTCCCCTGAGTGAACTGAGACAGAACTTCTCCAAGAGCTGGTACGACATGCAGACCAGCACAGCATACAAAAAGACTTCTGAGACACTGAGCACGGCAGGACAGAGGACCTCGGCGGCCTTCAGTAACCTGGGCAATGTCATCACCAGGAAGTTTGGCGATATGAGGTCATATTCTCTTGGCTATTCTATACGGCATTCAATGAGCATGCCCACAATGAGgaaCTCGCCTAGTTTCAAGTCTTTTGAGGAGAAAGTCGAAAGCACAGTTTCAAACATTAAGTCAAAGGTTGGAGGAACAGGAGGTGCGGGGAGTTTTGAAGAGGTCCTGTCTTCAGCGGCCCAAGCCAGCGCCCAGGACACCCCTACTAATAATGTGACTGAGAACAGTGAGCGCTAAGGGTTTCAATGGTCCACCAGTGGAACTCTGATGACCCCTAGTGGTTTGGAGACCGCAGTGAAATTTGCACAGGGGGCCCTAACACGGTAATACATGCCTTCAGATGCGTGTTTGTGGATTATCTGTGCACGGGAGGAAAAAACAACCAAGTGGAGCCTGTTTATTCTTTAAGTTCTTTTcgaaatatgtatatttttcgAGGATATTGTCTATGGTGTAGTCCTGCGTTACTTCGTTACTATCATTATTTATACTAACTCAACTTTGTTTAACTGTAACAAAGCATGATACATATCCAGGACCAAAAAGAATCGCTGCGTATACAATCCCAAGAGAAGTACTTGAAAGAATGTTTAACAAAATAGACATTAGTCTTTGTTTTTCCTGTCATGAATGAGTCAACGCTCACATTCCTGTTAACTAGAGTGCGTAAAAAATGAGGATTTACATTTTACTTGCTTGATCTGATACGTCTGATGTAAACCGTAATGTATCGGATGATAATTGTCACTGACCAAAAATGTATAGCTTTGtatcctgtttttttctttcgtaCATACGTGTGAAATTTGTTGCAGCTTTACATGTTTAACACTGACAGTGAAGTCAGGTGttgttttaagattttatagCCGAAATCTTTCTTCAAATTCATACTCAGTGTTGAGCTGCCGTTCATTAATATTGTTAGTcattaaacgtttttttttttgcaaagtcaCAAAGTCCCGGCTCATCAGTCGTGAAATTAAGGTGATCTGAACCATAATAAGAGAccataaaatgaacattaattttACTGTTACTTTGTCAGTAAAAGGGTAAAGCATGGCAgagt
>XM_043219211.1
GAAGCTGCCCCGGTAATGGGCGGGGTTTTGGGAGCAGGCAGTGAGTGTGTGGAGCTGTTGTGCTGGACGGGATATTTCTCTCAACGGAGAGGTGCTGTTAATGTGAAGAGGACCTGCATTTGCACACTTACCGCTGATATGGAGCCCAGACAACAGGGTTTATTGGACAAAGAGCCTCTAAAGGAAGTGGACGAGGATATGGTGTCAGAGGTGGATCTCAACAACACTGTCACAGAAGAGGAGCGAGAGGAAATGGAGAATGAACTGATTAAGTTAGAAGAGGAAATCACTACTTTGAAACAAGTGCTAGCCTCCAAAGAAAAGCGTCACTTGGAGCTGAAGCAGAAACTGGGGATCACTCCCCTGAGTGAACTGAGACAGAACTTCTCCAAGAGCTGGTACGACATGCAGACCAGCACAGCATACAAAAAGACTTCTGAGACACTGAGCACGGCAGGACAGAGGACCTCGGCGGCCTTCAGTAACCTGGGCAATGTCATCACCAGGAAGTTTGGCGATATGAGGTCATATTCTCTTGGCTATTCTATACGGCATTCAATGAGCATGCCCACAATGAGgaaCTCGCCTAGTTTCAAGTCTTTTGAGGAGAAAGTCGAAAGCACAGTTTCAAACATTAAGTCAAAGGTTGGAGGAACAGGAGGTGCGGGGAGTTTTGAAGAGGTCCTGTCTTCAGCGGCCCAAGCCAGCGCCCAGGACACCCCTACTAATAATGTGACTGAGAACAGTGAGCGCTAAGGGTTTCAATGGTCCACCAGTGGAACTCTGATGACCCCTAGTGGTTTGGAGACCGCAGTGAAATTTGCACAGGGGGCCCTAACACGGTAATACATGCCTTCAGATGCGTGTTTGTGGATTATCTGTGCACGGGAGGAAAAAACAACCAAGTGGAGCCTGTTTATTCTTTAAGTTCTTTTcgaaatatgtatatttttcgAGGATATTGTCTATGGTGTAGTCCTGCGTTACTTCGTTACTATCATTATTTATACTAACTCAACTTTGTTTAACTGTAACAAAGCATGATACATATCCAGGACCAAAAAGAATCGCTGCGTATACAATCCCAAGAGAAGTACTTGAAAGAATGTTTAACAAAATAGACATTAGTCTTTGTTTTTCCTGTCATGAATGAGTCAACGCTCACATTCCTGTTAACTAGAGTGCGTAAAAAATGAGGATTTACATTTTACTTGCTTGATCTGATACGTCTGATGTAAACCGTAATGTATCGGATGATAATTGTCACTGACCAAAAATGTATAGCTTTGtatcctgtttttttctttcgtaCATACGTGTGAAATTTGTTGCAGCTTTACATGTTTAACACTGACAGTGAAGTCAGGTGttgttttaagattttatagCCGAAATCTTTCTTCAAATTCATACTCAGTGTTGAGCTGCCGTTCATTAATATTGTTAGTcattaaacgtttttttttttgcaaagtcaCAAAGTCCCGGCTCATCAGTCGTGAAATTAAGGTGATCTGAACCATAATAAGAGAccataaaatgaacattaattttACTGTTACTTTGTCAGTAAAAGGGTAAAGCATGGCAgagt
>XM_043219212.1
CGCTAAAGTCAATGCATGTATTTACAGATTTGTGCTTTAATCTTTTGCTTGTTTTGCCGATCACACTTTCCAGAGCTGTACTCTAGCGTACTGACTCCTGAAGCAATATTAGACTGGGAGGACAGAGAAACATTCCATGCAGGTTTATTGGACAAAGAGCCTCTAAAGGAAGTGGACGAGGATATGGTGTCAGAGGTGGATCTCAACAACACTGTCACAGAAGAGGAGCGAGAGGAAATGGAGAATGAACTGATTAAGTTAGAAGAGGAAATCACTACTTTGAAACAAGTGCTAGCCTCCAAAGAAAAGCGTCACTTGGAGCTGAAGCAGAAACTGGGGATCACTCCCCTGAGTGAACTGAGACAGAACTTCTCCAAGAGCTGGTACGACATGCAGACCAGCACAGCATACAAAAAGACTTCTGAGACACTGAGCACGGCAGGACAGAGGACCTCGGCGGCCTTCAGTAACCTGGGCAATGTCATCACCAGGAAGTTTGGCGATATGAGGTCATATTCTCTTGGCTATTCTATACGGCATTCAATGAGCATGCCCACAATGAGgaaCTCGCCTAGTTTCAAGTCTTTTGAGGAGAAAGTCGAAAGCACAGTTTCAAACATTAAGTCAAAGGTTGGAGGAACAGGAGGTGCGGGGAGTTTTGAAGAGGTCCTGTCTTCAGCGGCCCAAGCCAGCGCCCAGGACACCCCTACTAATAATGTGACTGAGAACAGTGAGCGCTAAGGGTTTCAATGGTCCACCAGTGGAACTCTGATGACCCCTAGTGGTTTGGAGACCGCAGTGAAATTTGCACAGGGGGCCCTAACACGGTAATACATGCCTTCAGATGCGTGTTTGTGGATTATCTGTGCACGGGAGGAAAAAACAACCAAGTGGAGCCTGTTTATTCTTTAAGTTCTTTTcgaaatatgtatatttttcgAGGATATTGTCTATGGTGTAGTCCTGCGTTACTTCGTTACTATCATTATTTATACTAACTCAACTTTGTTTAACTGTAACAAAGCATGATACATATCCAGGACCAAAAAGAATCGCTGCGTATACAATCCCAAGAGAAGTACTTGAAAGAATGTTTAACAAAATAGACATTAGTCTTTGTTTTTCCTGTCATGAATGAGTCAACGCTCACATTCCTGTTAACTAGAGTGCGTAAAAAATGAGGATTTACATTTTACTTGCTTGATCTGATACGTCTGATGTAAACCGTAATGTATCGGATGATAATTGTCACTGACCAAAAATGTATAGCTTTGtatcctgtttttttctttcgtaCATACGTGTGAAATTTGTTGCAGCTTTACATGTTTAACACTGACAGTGAAGTCAGGTGttgttttaagattttatagCCGAAATCTTTCTTCAAATTCATACTCAGTGTTGAGCTGCCGTTCATTAATATTGTTAGTcattaaacgtttttttttttgcaaagtcaCAAAGTCCCGGCTCATCAGTCGTGAAATTAAGGTGATCTGAACCATAATAAGAGAccataaaatgaacattaattttACTGTTACTTTGTCAGTAAAAGGGTAAAGCATGGCAgagt
>XM_043219213.1
GAAGCTGCCCCGGTAATGGGCGGGGTTTTGGGAGCAGGCAGTGAGTGTGTGGAGCTGTTGTGCTGGACGGGATATTTCTCTCAACGGAGAGGTGCTGTTAATGTGAAGAGGACCTGCATTTGCACACTTACCGCTGATATGGAGCCCAGACAACAGGGTTTATTGGACAAAGAGCCTCTAAAGGAAGTGGACGAGGATATGGTGTCAGAGGTGGATCTCAACAACACTGTCACAGAAGAGGAGCGAGAGGAAATGGAGAATGAACTGATTAAGTTAGAAGAGGAAATCACTACTTTGAAACAAGTGCTAGCCTCCAAAGAAAAGCGTCACTTGGAGCTGAAGCAGAAACTGGGGATCACTCCCCTGAGTGAACTGAGACAGAACTTCTCCAAGAGCTGGTACGACATGCAGACCAGCACAGCATACAAAAAGACTTCTGAGACACTGAGCACGGCAGGACAGAGGACCTCGGCGGCCTTCAGTAACCTGGGCAATGTCATCACCAGGAAGTTTGGCGATATGAGgaaCTCGCCTAGTTTCAAGTCTTTTGAGGAGAAAGTCGAAAGCACAGTTTCAAACATTAAGTCAAAGGTTGGAGGAACAGGAGGTGCGGGGAGTTTTGAAGAGGTCCTGTCTTCAGCGGCCCAAGCCAGCGCCCAGGACACCCCTACTAATAATGTGACTGAGAACAGTGAGCGCTAAGGGTTTCAATGGTCCACCAGTGGAACTCTGATGACCCCTAGTGGTTTGGAGACCGCAGTGAAATTTGCACAGGGGGCCCTAACACGGTAATACATGCCTTCAGATGCGTGTTTGTGGATTATCTGTGCACGGGAGGAAAAAACAACCAAGTGGAGCCTGTTTATTCTTTAAGTTCTTTTcgaaatatgtatatttttcgAGGATATTGTCTATGGTGTAGTCCTGCGTTACTTCGTTACTATCATTATTTATACTAACTCAACTTTGTTTAACTGTAACAAAGCATGATACATATCCAGGACCAAAAAGAATCGCTGCGTATACAATCCCAAGAGAAGTACTTGAAAGAATGTTTAACAAAATAGACATTAGTCTTTGTTTTTCCTGTCATGAATGAGTCAACGCTCACATTCCTGTTAACTAGAGTGCGTAAAAAATGAGGATTTACATTTTACTTGCTTGATCTGATACGTCTGATGTAAACCGTAATGTATCGGATGATAATTGTCACTGACCAAAAATGTATAGCTTTGtatcctgtttttttctttcgtaCATACGTGTGAAATTTGTTGCAGCTTTACATGTTTAACACTGACAGTGAAGTCAGGTGttgttttaagattttatagCCGAAATCTTTCTTCAAATTCATACTCAGTGTTGAGCTGCCGTTCATTAATATTGTTAGTcattaaacgtttttttttttgcaaagtcaCAAAGTCCCGGCTCATCAGTCGTGAAATTAAGGTGATCTGAACCATAATAAGAGAccataaaatgaacattaattttACTGTTACTTTGTCAGTAAAAGGGTAAAGCATGGCAgagt

Function

symbol description
rnf217 Predicted to enable ubiquitin conjugating enzyme binding activity and ubiquitin protein ligase activity. Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; protein polyubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of ubiquitin ligase complex. Predicted to be active in cytoplasm. Orthologous to human RNF217 (ring finger protein 217).
tpd52l1 Predicted to be involved in positive regulation of MAP kinase activity and positive regulation of apoptotic signaling pathway. Predicted to be active in cytoplasm. Orthologous to human TPD52L1 (TPD52 like 1).

NR:

description
tumor protein D53 homolog isoform X8

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K11977 RNF217, IBRDC1; E3 ubiquitin-protein ligase RNF217

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219207.1 True 2978 mRNA 0.44 11 20373210 20407062
XM_043219209.1 False 2949 mRNA 0.44 9 20373185 20407062
XM_043219210.1 False 2147 mRNA 0.44 11 20373210 20406097
XM_043219211.1 False 1594 mRNA 0.43 8 20373210 20388478
XM_043219212.1 False 1579 mRNA 0.41 9 20373210 20387142
XM_043219213.1 False 1540 mRNA 0.43 6 20373210 20388478

Neighbor

gene id symbol gene type direction distance location
hey2 hey2,LOC107717129,LOC107727582,LOC107598074 coding downstream 38272 20330690 ~ 20334913 (-)
pex7 pex7,LOC107727680,LOC107676274 coding downstream 44487 20311424 ~ 20328698 (-)
LOC122324455 slc35d3,LOC107727602,LOC107676236,LOC107675071,LOC107717122 coding downstream 61900 20306639 ~ 20311285 (-)
pbk pbk,LOC107598104,LOC107717112,LOC107727585,LOC107676230,LOC107602197 coding downstream 68311 20301406 ~ 20304874 (-)
ccdc25 ccdc25,LOC107727664,LOC107602198,LOC107676265,LOC107675065,LOC107598073,LOC107716775 coding downstream 77026 20293294 ~ 20296159 (-)
clvs2 clvs2,LOC107675233,LOC107675107 coding upstream 189201 20596263 ~ 20616215 (-)
smpdl3a smpdl3a,LOC107727613 coding upstream 219911 20626973 ~ 20632507 (-)
fabp7b fabp7b,fabp7,LOC107675216,LOC107602177,LOC107717149,LOC107675046,LOC102218712 coding upstream 225655 20632717 ~ 20633782 (-)
cpsf2 cpsf2,LOC107704064,LOC107669458 coding upstream 253949 20661011 ~ 20673120 (-)
riox1 zgc:162967,LOC107704066,LOC107669424,LOC107719421,LOC107559126,LOC107548410 coding upstream 267935 20674997 ~ 20680821 (-)
G140328 NA non-coding downstream 86190 20286480 ~ 20286995 (-)
G140315 NA non-coding downstream 104919 20266668 ~ 20268266 (-)
G140304 NA non-coding downstream 205187 20148280 ~ 20167998 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding downstream 463538 19905631 ~ 19909647 (-)
G140248 NA non-coding downstream 571517 19800522 ~ 19801668 (-)
G140413 NA non-coding upstream 219593 20626655 ~ 20626863 (-)
G140449 NA non-coding upstream 329526 20736588 ~ 20791701 (-)
LOC122324961 NA non-coding upstream 585459 20992521 ~ 20995513 (-)
G140522 cfap61,LOC107745908,LOC107704077 non-coding upstream 589304 20996366 ~ 20996681 (-)
LOC122325251 NA non-coding upstream 638763 21045825 ~ 21049976 (-)
G140277 cad,LOC107602171 other downstream 310208 20061602 ~ 20062977 (-)
G140227 cad other downstream 313582 20057624 ~ 20059603 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other downstream 757983 19601532 ~ 19615202 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 1069217 19298234 ~ 19303968 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other downstream 1110233 19261466 ~ 19262952 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other upstream 3567 20410629 ~ 20542249 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 227234 20634296 ~ 20658380 (-)
crnkl1 crnkl1,LOC107548429,LOC107704074,LOC107669451,LOC107559132,LOC106607683,LOC107745910 other upstream 561126 20968188 ~ 20975755 (-)
nkx2.2b LOC107704037,LOC107719379,LOC107559088 other upstream 682342 21089404 ~ 21091008 (-)
G140616 NA other upstream 791648 21198710 ~ 21278741 (-)

Expression


Co-expression Network