yy1b (LOC107756049,LOC107704390,LOC107712210,LOC107659816,LOC107564321)


Basic Information

Item Value
gene id yy1b
gene name LOC107756049,LOC107704390,LOC107712210,LOC107659816,LOC107564321
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26024861 ~ 26030986 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219225.1
aataacaataatcacGACATTTAACACAATTCATCCACTAAAGGGACAGAAATAAGCCAACTGTAAAATTAATTCACGCAGTGTATTTACACACAGCGCGGCTCTGATCTCGCGAGATCTGGCGGAGCGACGTGAACTCCTGTGAGAAGTGgagcagtgttgccaagtcctcGTTTTCCCCGCGGCATCGGGTTACTCCGACGTCTTTGCCCGAGTTGTGTTTCACGCCCGACTCTAACAACGCGACGTTTTCTAGCGATTCTTCGTATCGGGAAAACATCGACTCGGTTTGCTCTGTGGCCATCTAGCGGCCATAAAGATAAACGACTCGCTCAGCGTCTGACGTCACGGATCACGTGTTCGTGGCAAAAACGAATCGAGCTCCGCTTCGGCGTGAAATGTGTTGCTCTTTGCTGCAAGCTCCGAAGCTTTGGTGTCGAACGTAACGTCgctattatcatcatcatccccTGCGATGCGAACGTCGCCGGGGGGAGCTCGCCCAGAAACGCGCGGTTTGCCCCCAGAACGAGTTTTTCACCGGGGGAGCCGGGTTTGAGCAGCGGCGGGGAGGGTTTCGTCGCGggaacctggcaaccctggagcGGAGCCCTACGCTCGGTTATTTGTGTTATCGGAGCGCGCGCGCTGCGGGTTTCAGGGGGTGTGCGAGCGAGCGAGAGCGTCGCGAGCCACAGCGGAGGCAGGCGAGCGAGGCGGACCCGGCGAACATGGCATCCGGCGAGACGCTGTACATCGAGGCGGACGGCTCGGAGATGCCCGCGGAGATCGTGGAGCTGCACGAGATCGAGGTGGAGACCATCGAGACCACGGTGATCGGCggcgacgacgacgacgacgacgagcAGCAGCCCATGATCGCGCTCCAGCCGCTGGTCACGGACGACCCGAGCCAGCTCCACCAGCACCAGGAGGTGATCCTGGTCCAGACCCGCGAGGAGGTGGTCGGCGGCGACGAGTCGGAGCTCCGCGGGGAGGACGGCTTCGAGGAGCGGATCCTCATCCCGGTGCCCGCGGAGGAGCACTACATCGGGCAGACGCTGCTCACGGTCGCGGGGAAGAGCTCCGCGGGGCGGCTGGGGAAGAGAGCGGCGTCGGGGGGCAAGAAAGCGGGCAAGAAGAGCTACCTGAGCGCGGCGGAGGCCTGTGGGAGGAAATGGGAGCAGAAGCAGGTGCAGATCAAGACTCTGGAGGGCGAGTTCTCCGTCACGATGTGGGCTTCGGATGACAAGAAGGACATCGATCACGAGACGGTGGTGGAGGAGCAGATCATCGGGGAAAACTCTCCTCCGGACTTTTCGGAGTACATGACGGGAAAGAAGCTCCCGCCGGGCGGAATCCCGGGGATCGATCTGTCAGACCCGAAGCAGCTGGCGGAGTTCGCCAGcCCCTTCAGTCACAGCGGAGCTGGTTTTGCTCGTAGTCCCGTCCGAATGAAGCCGAGGAAGATCAAGGAAGACGACGCTCCTCGGACGATAGCCTGCCCGCACAAAGGCTGCAGTAAAATGTTCAGGGATAATTCAGCCATGAGGAAGCACCTGCACACTCACGGCCCGCGGGTCCACGTCTGCGCCGAGTGCGGCAAGGCCTTCGTGGAGAGCTCCAAACTCAAGCGGCATCAGCtggttcacaccggagagaaacccttCCAGTGCACGTTCGAGGGCTGCGGGAAGCGCTTCTCCCTGGACTTTAACCTTCGGACACACGTccggatccacaccggagaccGGCCCTACGTCTGCCCCTTCGACGGCTGCAATAAAAAGTTTGCTCAGTCCACCAACCTCAAATCACACATCCTGACACACGCCAAAGCCAAGAACAACCCCTGACAGGTATCAGACTCCTTCACGGATGATGCTTTTTACCACAGAGACCAACCGGAACGCTTCATTCTTTTCCACGTTTACTTCGGCCTCTCGCCTCTTCATACACATATAgcttttaattttctatttctCCAAGTGTGCATATTGTACACTGATTTTGGGGTGTGCTTCAGGATCATGCTGTTAGTTGTTGTGACCTGCTGGACGCTGTGGGTCGTGTTGATCTGCTTTCTTCACCGGTTGCTTTCGTCCTCTCTCTCGAGTCGCACCACGCTGAACCGCAGTGTTAACTGtcgttttttctttgttagaaTGTATCGTAAAGGTCTGAACCATGAGCTATCCTTTGTTAATATTTACACCTCACCTGTATTTCAGCAAACTACAATTAAAGAGGGAAAAATC
>XM_043219226.1
aataatcacGACATTTAACACAATTCATCCACTAAAGGGACAGAAATAAGCCAACTGTAAAATTAATTCACGCAGTGTATTTACACACAGCGCGGCTCTGATCTCGCGAGATCTGGCGGAGCGACGTGAACTCCTGTGAGAAGTGgagcagtgttgccaagtcctcGTTTTCCCCGCGGCATCGGGTTACTCCGACGTCTTTGCCCGAGTTGTGTTTCACGCCCGACTCTAACAACGCGACGTTTTCTAGCGATTCTTCGTATCGGGAAAACATCGACTCGGTTTGCTCTGTGGCCATCTAGCGGCCATAAAGATAAACGACTCGCTCAGCGTCTGACGTCACGGATCACGTGTTCGTGGCAAAAACGAATCGAGCTCCGCTTCGGCGTGAAATGTGTTGCTCTTTGCTGCAAGCTCCGAAGCTTTGGTGTCGAACGTAACGTCgctattatcatcatcatccccTGCGATGCGAACGTCGCCGGGGGGAGCTCGCCCAGAAACGCGCGGTTTGCCCCCAGAACGAGTTTTTCACCGGGGGAGCCGGGTTTGAGCAGCGGCGGGGAGGGTTTCGTCGCGggaacctggcaaccctggagcGGAGCCCTACGCTCGGTTATTTGTGTTATCGGAGCGCGCGCGCTGCGGGTTTCAGGGGGTGTGCGAGCGAGCGAGAGCGTCGCGAGCCACAGCGGAGGCAGGCGAGCGAGGCGGACCCGGCGAACATGGCATCCGGCGAGACGCTGTACATCGAGGCGGACGGCTCGGAGATGCCCGCGGAGATCGTGGAGCTGCACGAGATCGAGGTGGAGACCATCGAGACCACGGTGATCGGCggcgacgacgacgacgacgacgagcAGCAGCCCATGATCGCGCTCCAGCCGCTGGTCACGGACGACCCGAGCCAGCTCCACCAGCACCAGGAGGTGATCCTGGTCCAGACCCGCGAGGAGGTGGTCGGCGGCGACGAGTCGGAGCTCCGCGGGGAGGACGGCTTCGAGGAGCGGATCCTCATCCCGGTGCCCGCGGAGGAGCACTACATCGGGCAGACGCTGCTCACGGTCGCGGGGAAGAGCTCCGCGGGGCGGCTGGGGAAGAGAGCGGCGTCGGGGGGCAAGAAAGCGGGCAAGAAGAGCTACCTGAGCGCGGCGGAGGCCTGTGGGAGGAAATGGGAGCAGAAGCAGGTGCAGATCAAGACTCTGGAGGGCGAGTTCTCCGTCACGATGTGGGCTTCGGATGACAAGAAGGACATCGATCACGAGACGGTGGTGGAGGAGCAGATCATCGGGGAAAACTCTCCTCCGGACTTTTCGGAGTACATGACGGGAAAGAAGCTCCCGCCGGGCGGAATCCCGGGGATCGATCTGTCAGACCCGAAGCAGCTGGCGGAGTTCGCCAGAATGAAGCCGAGGAAGATCAAGGAAGACGACGCTCCTCGGACGATAGCCTGCCCGCACAAAGGCTGCAGTAAAATGTTCAGGGATAATTCAGCCATGAGGAAGCACCTGCACACTCACGGCCCGCGGGTCCACGTCTGCGCCGAGTGCGGCAAGGCCTTCGTGGAGAGCTCCAAACTCAAGCGGCATCAGCtggttcacaccggagagaaacccttCCAGTGCACGTTCGAGGGCTGCGGGAAGCGCTTCTCCCTGGACTTTAACCTTCGGACACACGTccggatccacaccggagaccGGCCCTACGTCTGCCCCTTCGACGGCTGCAATAAAAAGTTTGCTCAGTCCACCAACCTCAAATCACACATCCTGACACACGCCAAAGCCAAGAACAACCCCTGACAGGTATCAGACTCCTTCACGGATGATGCTTTTTACCACAGAGACCAACCGGAACGCTTCATTCTTTTCCACGTTTACTTCGGCCTCTCGCCTCTTCATACACATATAgcttttaattttctatttctCCAAGTGTGCATATTGTACACTGATTTTGGGGTGTGCTTCAGGATCATGCTGTTAGTTGTTGTGACCTGCTGGACGCTGTGGGTCGTGTTGATCTGCTTTCTTCACCGGTTGCTTTCGTCCTCTCTCTCGAGTCGCACCACGCTGAACCGCAGTGTTAACTGtcgttttttctttgttagaaTGTATCGTAAAGGTCTGAACCATGAGCTATCCTTTGTTAATATTTACACCTCACCTGTATTTCAGCAAACTACAATTAAAGAGGGAAAAATC

Function

NR:

description
PREDICTED: transcriptional repressor protein YY1-like isoform X1

GO: NA

KEGG:

id description
K09201 YY; transcription factor YY

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219225.1 True 2258 mRNA 0.57 6 26024861 26030986
XM_043219226.1 False 2207 mRNA 0.57 5 26024867 26030986

Neighbor

gene id symbol gene type direction distance location
LOC122324854 LOC107575530 coding upstream 30767 25982812 ~ 25994094 (+)
LOC122325520 LOC107712196,LOC107659793,LOC107564338 coding upstream 44483 25979467 ~ 25980378 (+)
LOC122324467 LOC107564327,LOC107712204,LOC107659822,LOC107712203,LOC108411733,LOC108258090 coding upstream 81576 25939571 ~ 25943285 (+)
lamp5 lamp5,zgc:165600,LOC107704368,LOC107557889 coding upstream 136012 25879511 ~ 25888849 (+)
plcb4 plcb4,LOC107564330,LOC107659823 coding upstream 149433 25831015 ~ 25875428 (+)
entpd5b entpd5b,LOC107756050,LOC107704388 coding downstream 24135 26055121 ~ 26069045 (+)
LOC122324376 clg18h14orf37,cunh14orf37,c25h14orf37,LOC107574488 coding downstream 154690 26185676 ~ 26194962 (+)
prpf39 prpf39,LOC107704382,LOC107659803,LOC107713858,LOC107567385 coding downstream 187593 26218579 ~ 26229745 (+)
faua fau,LOC107557010,LOC107567395,LOC107659798,LOC107717644,LOC107704371,LOC105017549 coding downstream 199800 26230786 ~ 26234218 (+)
trnas-gcu_31 NA coding downstream 526697 26557683 ~ 26557764 (+)
G142145 NA non-coding upstream 56525 25967720 ~ 25968336 (+)
G142133 NA non-coding upstream 62241 25943346 ~ 25962620 (+)
G142119 NA non-coding upstream 63389 25911376 ~ 25961472 (+)
G142139 NA non-coding upstream 70690 25953800 ~ 25954171 (+)
G142107 NA non-coding upstream 131144 25891158 ~ 25893717 (+)
G142157 NA non-coding downstream 17485 26048471 ~ 26054584 (+)
G142086 LOC107756052,LOC107575297 non-coding downstream 44145 26075131 ~ 26076630 (+)
G142104 NA non-coding downstream 46116 26077102 ~ 26078124 (+)
G142087 NA non-coding downstream 49195 26080181 ~ 26083938 (+)
G142095 NA non-coding downstream 71825 26102811 ~ 26134775 (+)
evlb evlb,LOC107756048,LOC107704391,LOC107564322,LOC107659817,LOC103152656,LOC105929101,LOC106954543,LOC106922124,LOC107090853 other upstream 629 26003763 ~ 26024232 (+)
LOC122325160 LOC107564323,LOC107659819 other upstream 21938 25996414 ~ 26002923 (+)
LOC122324336 LOC107564333,LOC107557900,LOC107659797,LOC107712192 other upstream 195946 25776475 ~ 25828915 (+)
fig4a fig4,fig4b,LOC107667833 other upstream 713434 25250898 ~ 25311427 (+)
G141775 NA other upstream 801752 25221967 ~ 25223109 (+)
G142173 NA other downstream 204435 26235421 ~ 26257234 (+)
G142333 LOC102197881 other downstream 447565 26478551 ~ 26479201 (+)
G142416 NA other downstream 872261 26903247 ~ 26905157 (+)
LOC122325079 dlg4,LOC107556052,LOC107662062,LOC106563427,LOC106603100 other downstream 941259 26972245 ~ 27093757 (+)

Expression


Co-expression Network