nt5e (nt5e,LOC107660511,LOC107554926,LOC107562347,LOC107680304)


Basic Information

Item Value
gene id nt5e
gene name nt5e,LOC107660511,LOC107554926,LOC107562347,LOC107680304
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1790036 ~ 1801963 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219243.1
ATGGGTCTGTCAGTTCAAGAGAGGGCTGAGAAGATGGTGATGCGGTGGctcaatgctttatttttcatctgGGTTCACTGTCGTATGTGCAGGACAGAGTTCGAGCTGACTTTGCTCCACACGAATGATGTTCACGCGCGAGTGGAGGAGACCAACAAGGACTCGGCCAAATGCACCAAGCAGCCTTGTTTCGCCGGAGTCGCGCGGAGATTCACGAAAATCAAAGAAGTTCGCAGCAAGGAGAAAAATGTCCTTCTGCTGGACGCGGGCGATCAGTTTCAAGGGACCGTCTGGTTTAACTTCTACAAAGGCGCGGAAGCGGCGCATTTCATGAATAAACTCGGATATGATGCGATGGCCTTAGGAAATCATGAATTTGACAACGGAGTCGATGGTCTCCTGAAACCTTTCCTCCAGCAAGTGAACTGCACTGTTCTTAGTGCGAATATCAAAGCCGATCAAACGATTGCTCCTCAGATCAGCGGCTTCTACCTCCCGTATAAGATCTTCACTGTTAACTCCGAGAAAGTGGGCGTTATTGGTTACACGTCAGTGGAGACCCCTGCTTTGTCTCTTCCAGGCCCCCATCTCCAGTTTGAGGAGGAGGTTGCTGCTCTACAGCCTCACGTGGACAAACTCATCACTTTGGGTGTTAATAAGATCATCGCCCTTGGGCATTCTGGGTTCAAAGTGGACCAAAACATAGCAAAGAAAGTCAGAGGGGTGGATGTTGTGATTGGAGGGCACACCAATACATTCCTATACACAGGAACGCCACCATCCACAGAAGTTCCTGCAGGAACATATCCATTCATGGTCCAGTCAGATGATGGGCGGCAGGTTCCCGTGGTCCAGGCCTTTGCTTTCGGGAAGTATCTGGGATTCCTAAAAGTGACTTTCGATTCAAATGGAAATGTGGTGAAATCTTCAGGCAATCCAATTCTTCTGGATAACTCAACAATACCAGATCCAGTCATTCAGGCCGAAGTGGACTCTTGGAAGAAGAATCTGGCCAATTACTCTGCTCAGTATGTGGGGCAGACTCTAGTCTATCTCAATGGAACGACACAGGAATGTCGATTTCGTGAATGTAATTTGGGAAATTTGATCTGTGATGCCATGgtccataataatattaaacatgctGATGAAACCCAGTGGAACCATGTCAGCTCTTGTATCCTAAACAGCGGCTCCATTCGAGCACCTATTGATGAGCAAAGCAGAAATGGCTCCATCACAATGGAGGATCTGACCGCTGTGATGCCGTTTGGAGGTACGTTTGACCTGGTCCAAATGAATGGATCTACTCTGAGAGAGGTCTTTGAGCACTCCGTTCGCAGACACGAAGGCGGCCATGGTGAATTCCTACAGGTGTCAGGGTTTCAGGTGGTGTACGATTTATCCAAATTGCCTGGAAACCGTGTTCAAAGTGTGAATGTGCTCTGCACTCAGTGTCGAGTGCCTCGCTATGAACCTCTCAACCCAAAAAAAGAGTATAAAGTGGTGATGCCCTCTTACCTGGTGGACGGAGGAGACGGATACTCTATGATCAAAGAACAGAAACTCAAACACGACAGCGGCGACCTGGATTTAGCAGTGGTTGCCAGCTACATCTCAGAGAGGAAGAGAGTTCACCCGGCTCTGGAAGGACGTATTCAGTTCACTAGCTCTTGCATCGGGCTTCGAGGATACATGTCTACTATTCTGCTGGCGGGGGTACTCTGGGTCGTGTttgtttagtcatttattatgtAACCGTAAGAAAAAATGATGTAGCCATTTGTGTGTAATTGTACagtcagagagaaaaaaggaaacctttAATCCAAAGATTAGTTACGGTCAAATAAGCAAACAGATTAACTGTGACGTAGTAATGATGAAAGAAAGTTACACAAGTTCTTATTCTGTAGAAATCTTCAATACAGGCACTTTccatatctttttaaaatgtatagaatTTATAGAGGGTATTTTTATGctgaatctcacaaaaaaatgtcCAGATCATGTTTCACTCCAAAAAAAAGCCCATTTTTAGGCCCATTAAGACACTTCGGTAATATCCTAATCCTAACTTCAAATGATTGcatgattattttgtattacacGAATGTTATTCTTTATCCAAAATGTACTCATATTTTCTTCTCAATTATGACCTGTACATCTTTTCATGAGattcttataaaaaaaagtgtaaatttatttatctgtgtttgtttcttgaTGGTGATTACATTGAATTATACGGCACAGCTTGTGATGATTAGAGATAGTGGATCTCCAGCCTCTTTTCCTAAGAtagctattaatatttttataaagcatttattttaaataattatatatttaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtaaaacacaTAACAAGGGACGATATATTAAGGTTTGATTTACTGAGCACAAAGCcagaacatttacaaaacattttattttcagtacttTGCCTTTGTACATGACTGACAAACAATATGAAATGCCGTCTTTTTCACTTGTCTtcatctttttcctttttgagcATCTTCAGGGACTtgtaaaatggtttatttaCATCTGATCTGGAGAATGTTATCATGCTGATAATGACATTGTGTGTTGAATCGCGCATAGTCTACTCGATGTTATAATGCTGTTACTAAACTGGAAAAATAAGGCAGGCCTCCAATCATTCAATGAAAAGCTATGGTATACAAACCCCAttaaagtcaataaataaatgtgtttttagtagTGCAATAAACGCTTTATAATGTC

Function

symbol description
nt5e Predicted to enable 5'-nucleotidase activity. Acts upstream of or within response to copper ion. Predicted to be located in membrane. Predicted to be anchored component of membrane. Predicted to be active in plasma membrane. Is expressed in brain and intestinal bulb. Human ortholog(s) of this gene implicated in hereditary arterial and articular multiple calcification syndrome. Orthologous to human NT5E (5'-nucleotidase ecto).

NR:

description
PREDICTED: 5'-nucleotidase-like

GO:

id name namespace
GO:0046688 response to copper ion biological_process
GO:0009166 nucleotide catabolic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0016788 hydrolase activity, acting on ester bonds molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K19970 NT5E, CD73; 5'-nucleotidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219243.1 True 2786 mRNA 0.42 9 1790036 1801963

Neighbor

gene id symbol gene type direction distance location
ankrd6b ankrd6,ankrd6b,LOC107562345,LOC107660530,LOC107731518,LOC107554922,LOC107742996 coding downstream 179246 1593730 ~ 1610790 (-)
LOC122325606 NA coding downstream 290549 1499378 ~ 1499487 (-)
LOC122325609 NA coding downstream 292064 1497862 ~ 1497972 (-)
LOC122325605 NA coding downstream 293594 1496331 ~ 1496442 (-)
LOC122325596 NA coding downstream 295121 1494802 ~ 1494915 (-)
mei4 mei4 coding upstream 6142 1808105 ~ 1819393 (-)
senp6a senp6,LOC107660507,LOC107707326,LOC107573984,LOC107680310 coding upstream 77359 1879322 ~ 1896773 (-)
nrl nrl,LOC107554929,LOC107680315,LOC107731521,LOC107707327,LOC107573986,LOC107660532 coding upstream 100399 1902362 ~ 1907463 (-)
kcnk2b kcnk2,kcnk2b,LOC107554930,LOC107731508,LOC107680301,LOC107660545,LOC107707328 coding upstream 132574 1934537 ~ 1965297 (-)
smyd2b smyd2b,LOC107731509,LOC107707324,LOC107574479,LOC107678788,LOC107660544,LOC107592980 coding upstream 174361 1976324 ~ 1988216 (-)
G135435 NA non-coding downstream 37089 1752733 ~ 1752947 (-)
G135434 NA non-coding downstream 37580 1752156 ~ 1752456 (-)
G135433 NA non-coding downstream 40233 1749595 ~ 1749803 (-)
G135430 NA non-coding downstream 44380 1745359 ~ 1745656 (-)
G135429 NA non-coding downstream 45182 1744645 ~ 1744854 (-)
G135480 NA non-coding upstream 75951 1877914 ~ 1878122 (-)
G135542 NA non-coding upstream 298033 2099996 ~ 2100241 (-)
G135546 NA non-coding upstream 556515 2358478 ~ 2358691 (-)
G135627 NA non-coding upstream 775169 2577132 ~ 2577488 (-)
G135629 NA non-coding upstream 777306 2579269 ~ 2579702 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 129500 1655096 ~ 1660536 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other downstream 218337 1546487 ~ 1571699 (-)
G135279 NA other downstream 679175 1110425 ~ 1110861 (-)
G135275 NA other downstream 684218 1103306 ~ 1105818 (-)
G135276 NA other downstream 686923 1102705 ~ 1103113 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other upstream 38165 1840128 ~ 1876292 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other upstream 203586 2005549 ~ 2013527 (-)
G135548 NA other upstream 562090 2364053 ~ 2364824 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other upstream 938589 2740552 ~ 2757430 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 1836326 3638289 ~ 3870066 (-)

Expression


Co-expression Network