mei4 (mei4)


Basic Information

Item Value
gene id mei4
gene name mei4
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 1808105 ~ 1819393 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219244.1
GTTGAATGAATGTATCAGTtgctttcaaaaacagaaagaaatgtcAGAAGTTCACTAGTTCTTGCTTATCTTGTCTCTGTAGGAGCGGTGAGCTGGTACATGAGAGTCTCTAAACTGGCCGTGGCCGTGGCTGTAATAAAGATCAGCCCATCGGGAGGAGCCAGACAGTTCATTGAATCTCTGGCTGACCGACTCAGACAGCAGGATGAAGGCTGGAGGTCTACAGCTCGAAGTCTCCATGAAGATGTGCTGCGTCTCAGACAAGAGCTGCTGCTCACCCGTTTACTGCTTAAGACGAAGAGTACTGAGGGGCCAGGGCATGGTCAAGAGATCGCCAGAGAGCTCTCTCAGGATGACCCTCATCAGTTAAAGGGTGGCTCTGGCTGTGAGTCACAAACACAGCTCACAGAGTGCTCACAAACACAGATATGTGTCGCCCAGGAACCATGCTTTCCTCCGACTCCTCCAAACAGTCAGAACTTTTCCCACCAGGACAGGAAATGGAAACAGGATGACAGGCTGCTAAAACACATGCGCTTCCTACGCTGCCTGAGTGGCTTGAGCAGAGGCTTTGAGTCATCTCTGTGTCCTGATGGTGACGTGGTCTGGGATTCGGTGGTGCAGTTGATGGATTGTGTGGTGGAGGTTTTCCGGCAGGCACATGTTGGACAGCCTCTGCATCACCCAGAGCGGCTGCATCATGCCACACGGGTGCTGGCACGGACCCTGAGTCGAGAAGGGACACAGCGTGGGTGCTCAGCGCAGCACTTCAGCAAAGTGGATGATCTGTTGAAGGAGATGATCAGCTTAATGCTCACCCAACAAAAACTCAATTCGTTCTCAGTCCACGGCGTGCTGTCAGAGTGTCTGCTGGCTCTGGGAGGAAGTCCTGTTGTGAGAACTGCACTCGTTCGACTCCTGATGTCTCAGATCATTCAGCTGGCACAGCAGCTGTGGGACACTTGTGAAAAGTCTAGAGAGGAGCTGCATCATCAGGTGGACTGGATCTGCTATGAAAATTCATTCTATGTGTTCTGGCTTCTGGAACATCTTGCCCAGGACAATGATTACAATGCGAACAAGGAGCTTGCGATCCAGCTGGAAACCAAAGCATTTTCTCTCGCAGATGAGTTTCCCTTGTTCTCTTTGTATATGTGGCGGATCGGAGGTCTCTTCAGATGAAGCCTCACTAATGTCTTTTGCTAAAATATTTGCTCCTTTCAAAATCTCACTTTCCATGAAGTGccttcatgtaaaaaaataattataataataattcaattaataaaatt
>XM_043219245.1
tatcaatggatttaattttttttaatcaatgaatAGTTTGAGATGTATTAAAAGGGTATACTCTATGTAAGCGTCTCCGATTTACATCCTAATGTTTGGACAAGAATGGAGGAGAAATCTGCCTCAAGTTATGAAGGAGCGGTGAGCTGGTACATGAGAGTCTCTAAACTGGCCGTGGCCGTGGCTGTAATAAAGATCAGCCCATCGGGAGGAGCCAGACAGTTCATTGAATCTCTGGCTGACCGACTCAGACAGCAGGATGAAGGCTGGAGGTCTACAGCTCGAAGTCTCCATGAAGATGTGCTGCGTCTCAGACAAGAGCTGCTGCTCACCCGTTTACTGCTTAAGACGAAGAGTACTGAGGGGCCAGGGCATGGTCAAGAGATCGCCAGAGAGCTCTCTCAGGATGACCCTCATCAGTTAAAGGGTGGCTCTGGCTGTGAGTCACAAACACAGCTCACAGAGTGCTCACAAACACAGATATGTGTCGCCCAGGAACCATGCTTTCCTCCGACTCCTCCAAACAGTCAGAACTTTTCCCACCAGGACAGGAAATGGAAACAGGATGACAGGCTGCTAAAACACATGCGCTTCCTACGCTGCCTGAGTGGCTTGAGCAGAGGCTTTGAGTCATCTCTGTGTCCTGATGGTGACGTGGTCTGGGATTCGGTGGTGCAGTTGATGGATTGTGTGGTGGAGGTTTTCCGGCAGGCACATGTTGGACAGCCTCTGCATCACCCAGAGCGGCTGCATCATGCCACACGGGTGCTGGCACGGACCCTGAGTCGAGAAGGGACACAGCGTGGGTGCTCAGCGCAGCACTTCAGCAAAGTGGATGATCTGTTGAAGGAGATGATCAGCTTAATGCTCACCCAACAAAAACTCAATTCGTTCTCAGTCCACGGCGTGCTGTCAGAGTGTCTGCTGGCTCTGGGAGGAAGTCCTGTTGTGAGAACTGCACTCGTTCGACTCCTGATGTCTCAGATCATTCAGCTGGCACAGCAGCTGTGGGACACTTGTGAAAAGTCTAGAGAGGAGCTGCATCATCAGGTGGACTGGATCTGCTATGAAAATTCATTCTATGTGTTCTGGCTTCTGGAACATCTTGCCCAGGACAATGATTACAATGCGAACAAGGAGCTTGCGATCCAGCTGGAAACCAAAGCATTTTCTCTCGCAGATGAGTTTCCCTTGTTCTCTTTGTATATGTGGCGGATCGGAGGTCTCTTCAGATGAAGCCTCACTAATGTCTTTTGCTAAAATATTTGCTCCTTTCAAAATCTCACTTTCCATGAAGTGccttcatgtaaaaaaataattataataataattcaattaataaaatt
>XM_043219246.1
accgagtttgAACCACCCTATACTAGTGCGTCCCATTACACACTTCTTCACTATTTTGATAGGGAGCGGTGAGCTGGTACATGAGAGTCTCTAAACTGGCCGTGGCCGTGGCTGTAATAAAGATCAGCCCATCGGGAGGAGCCAGACAGTTCATTGAATCTCTGGCTGACCGACTCAGACAGCAGGATGAAGGCTGGAGGTCTACAGCTCGAAGTCTCCATGAAGATGTGCTGCGTCTCAGACAAGAGCTGCTGCTCACCCGTTTACTGCTTAAGACGAAGAGTACTGAGGGGCCAGGGCATGGTCAAGAGATCGCCAGAGAGCTCTCTCAGGATGACCCTCATCAGTTAAAGGGTGGCTCTGGCTGTGAGTCACAAACACAGCTCACAGAGTGCTCACAAACACAGATATGTGTCGCCCAGGAACCATGCTTTCCTCCGACTCCTCCAAACAGTCAGAACTTTTCCCACCAGGACAGGAAATGGAAACAGGATGACAGGCTGCTAAAACACATGCGCTTCCTACGCTGCCTGAGTGGCTTGAGCAGAGGCTTTGAGTCATCTCTGTGTCCTGATGGTGACGTGGTCTGGGATTCGGTGGTGCAGTTGATGGATTGTGTGGTGGAGGTTTTCCGGCAGGCACATGTTGGACAGCCTCTGCATCACCCAGAGCGGCTGCATCATGCCACACGGGTGCTGGCACGGACCCTGAGTCGAGAAGGGACACAGCGTGGGTGCTCAGCGCAGCACTTCAGCAAAGTGGATGATCTGTTGAAGGAGATGATCAGCTTAATGCTCACCCAACAAAAACTCAATTCGTTCTCAGTCCACGGCGTGCTGTCAGAGTGTCTGCTGGCTCTGGGAGGAAGTCCTGTTGTGAGAACTGCACTCGTTCGACTCCTGATGTCTCAGATCATTCAGCTGGCACAGCAGCTGTGGGACACTTGTGAAAAGTCTAGAGAGGAGCTGCATCATCAGGTGGACTGGATCTGCTATGAAAATTCATTCTATGTGTTCTGGCTTCTGGAACATCTTGCCCAGGACAATGATTACAATGCGAACAAGGAGCTTGCGATCCAGCTGGAAACCAAAGCATTTTCTCTCGCAGATGAGTTTCCCTTGTTCTCTTTGTATATGTGGCGGATCGGAGGTCTCTTCAGATGAAGCCTCACTAATGTCTTTTGCTAAAATATTTGCTCCTTTCAAAATCTCACTTTCCATGAAGTGccttcatgtaaaaaaataattataataataattcaattaataaaatt

Function

symbol description
mei4 Predicted to be involved in gamete generation and meiosis I cell cycle process. Predicted to act upstream of or within DNA recombination and meiotic cell cycle. Predicted to be located in chromosome. Predicted to be active in lateral element. Orthologous to human MEI4 (meiotic double-stranded break formation protein 4).

NR:

description
meiosis-specific protein MEI4

GO:

id name namespace
GO:0048477 oogenesis biological_process
GO:0042138 meiotic DNA double-strand break formation biological_process
GO:0007283 spermatogenesis biological_process
GO:0007129 homologous chromosome pairing at meiosis biological_process
GO:0000800 lateral element cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219244.1 False 1292 mRNA 0.49 4 1808105 1818368
XM_043219245.1 True 1346 mRNA 0.48 5 1808105 1819393
XM_043219246.1 False 1273 mRNA 0.49 5 1808105 1818474

Neighbor

gene id symbol gene type direction distance location
nt5e nt5e,LOC107660511,LOC107554926,LOC107562347,LOC107680304 coding downstream 6142 1790036 ~ 1801963 (-)
ankrd6b ankrd6,ankrd6b,LOC107562345,LOC107660530,LOC107731518,LOC107554922,LOC107742996 coding downstream 197315 1593730 ~ 1610790 (-)
LOC122325606 NA coding downstream 308618 1499378 ~ 1499487 (-)
LOC122325609 NA coding downstream 310133 1497862 ~ 1497972 (-)
LOC122325605 NA coding downstream 311663 1496331 ~ 1496442 (-)
senp6a senp6,LOC107660507,LOC107707326,LOC107573984,LOC107680310 coding upstream 59929 1879322 ~ 1896773 (-)
nrl nrl,LOC107554929,LOC107680315,LOC107731521,LOC107707327,LOC107573986,LOC107660532 coding upstream 82969 1902362 ~ 1907463 (-)
kcnk2b kcnk2,kcnk2b,LOC107554930,LOC107731508,LOC107680301,LOC107660545,LOC107707328 coding upstream 115144 1934537 ~ 1965297 (-)
smyd2b smyd2b,LOC107731509,LOC107707324,LOC107574479,LOC107678788,LOC107660544,LOC107592980 coding upstream 156931 1976324 ~ 1988216 (-)
si:dkey-121j17.6 LOC107660501,LOC107574480,LOC107731504 coding upstream 170092 1989485 ~ 1992179 (-)
G135435 NA non-coding downstream 55158 1752733 ~ 1752947 (-)
G135434 NA non-coding downstream 55649 1752156 ~ 1752456 (-)
G135433 NA non-coding downstream 58302 1749595 ~ 1749803 (-)
G135430 NA non-coding downstream 62449 1745359 ~ 1745656 (-)
G135429 NA non-coding downstream 63251 1744645 ~ 1744854 (-)
G135480 NA non-coding upstream 58521 1877914 ~ 1878122 (-)
G135542 NA non-coding upstream 280603 2099996 ~ 2100241 (-)
G135546 NA non-coding upstream 539085 2358478 ~ 2358691 (-)
G135627 NA non-coding upstream 757739 2577132 ~ 2577488 (-)
G135629 NA non-coding upstream 759876 2579269 ~ 2579702 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 147569 1655096 ~ 1660536 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other downstream 236406 1546487 ~ 1571699 (-)
G135279 NA other downstream 697244 1110425 ~ 1110861 (-)
G135275 NA other downstream 702287 1103306 ~ 1105818 (-)
G135276 NA other downstream 704992 1102705 ~ 1103113 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other upstream 20735 1840128 ~ 1876292 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other upstream 186156 2005549 ~ 2013527 (-)
G135548 NA other upstream 544660 2364053 ~ 2364824 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other upstream 921159 2740552 ~ 2757430 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 1818896 3638289 ~ 3870066 (-)

Expression


Co-expression Network