ccm2 (ccm2,LOC107589047,LOC107684794,LOC107723330)


Basic Information

Item Value
gene id ccm2
gene name ccm2,LOC107589047,LOC107684794,LOC107723330
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 10638226 ~ 10648648 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219278.1
GCAAAGCACTGTGGGTAGACGTCCTACGCCCAAAATGGCGGCAGGATTGAAAagtttgttgctgtttttgttttattttatggcattttatCGTCCTGTGTCCCCTTCTGAATAAATCCCTATATTTATCACAGTTAAGAAGGTTGGTCGTTTGTTTCCGATCCACGAAGGCGTGATTTGGATCggtgttttgtttagtttagctCGGTAAAGCGCCTCCTCCGTGGACGCGTACGAGGCAGATGGCTCTGAACTCGTGGATATCACTGCGTCTCATACGATTAAAATGAAGAGCATTTGTACATAGAGATGGAGGATGACGTAAAGAAAGTCAAAAAGccaGGTATTGTGTCTCCGTTCAAGCGGGTGTTTCTGAAAGGAGAGAAGGGGAGAGATAAGAAGGCTCTGGAGAAGTCCACCGAGCGCAGGGCCCTCCACaccttctccctctctctcccggACCACCGTATCGACCCAGAGATTCTGCTCAATGACTACATTGAGAAGGAAGTTAAGTACCTGGGACAGCTGACCTCAGTTCCTGGATATCTGAATCCCTCCAGCCGCACAGAAGTTCTGCAGCTTATTGACAATGCCAGGAAGTCTCATCAGTTGGCAGGGCAGCTGACATCAGAGCAGGATGCTGTTGTCAGTTTGTCGGCATACAATGTGAAGCTTGTGTGGCGCGACGGAGAAGACATCATTCTTCGCGTACCCATACATGACATCGCAGCTGTGTCCTACATCAGAGACGACTCGCTCCACCTCGTGGTGCTAAAAACGGCTCAGGAGCCCGGTGGTTCTCCATGTCATAGTACAGAGATGTCAAAGTCTCCCACTCTGAGCTCTCTTTCGGAGAGCGGGGCTGTGCTTGTGGAGGTCTGCTGTCTGCTTGTGCTGGCAGTCGACAATAAGGCTGCGGCAGAGGAGCTGTGTCTTCTGCTTAGTCAAGTCTTCCAGATTGTCTACACAGAGTCCACCATTGACTTCCTGGACAGGGCCATCTTTGATGGAGCCACAACCCCCATCAGGCATCTCTCGATCTGCAGCGagGACTCCTCGAGCAAAGATGTCAAAGAAGTGTTTGAGGCCGAGGCGAGCACATTTACTTTTTCTAGTTCTCTAGAGGCGGGACACTCCTCTAGCCCCTCCCCCTCCTCCACCCCGGCCTCGCCGCAAACCATAACAGCCAGTGAGAGTGAACTAAGCACAACGGCTGCTGAACTGCTACAAGACTACATGACTACATTGAGGACAAAGCTGTCATCTCAGGAGATACAGCAGTTTGCCACACTGTTACGCGAGTACAGAAACGGAGCCTCCATCCATGAGTTCTGCATCAACCTGCGGCAGCTTTATGGAGACAGCAGGAAGTTCCTCCTCTTGGGACTGCGGCCTTTCATTCCTGAGAAGGACAGCCAGCACTTTGAGAACTTTTTGGAAACCATCGGCGTGAAGGACGGCCGCGGCATCATAACGGACAGCTTTGGGCGTTACAAACGTACGACAAGCTCTGCGTCAGACTCCACCACTAACGGAAACGGTGCTGCGGGCGGCTCGGACGAAGGAACGGCCACCTCTGAGGGCGACGAATGGGACCGCATGATTTCAGACATAAGCAATGACATTGAAGCGTTAGGAAGCAGTATGGACCAGGACGGCGTGTCGTCTTGATGTCACGGCACTGGGTCAGTGACTCGCTGCGTGCTTTAGCCAATCACCACTTGAGATAATCACATGGGCCATCGGTTCATATTGCTGTCCATCAAATCTGACAATGCTGGAGTTCGGATACTGTATGGATACCACTTCCTGGCCATCCTCCTTATTTTTATACGTTGTGCCATATTAACACGAGCagattttttcagattttgagAATTGTGATTTTTCAAGATCTGCGATAGAAGGATCATGTATTGCTGTGGACAGCAGTTGTGTTCTTCTGGGATGTTTATTGGCAGTATCTGCTACCACTAATGAGAGACCTTGTTGCTGGTAGATCTTGCTCTTCGCGCTGATCCGAAAGCTTATTTCCACCACAGAATACAAAGAGCTTGttaccatttattttacacttttactttttttcccccctcacaGTTCTGACAGaatctcagaattgtgagatataaaatgTCAGAACttacaattatacatttataactaAATTGAGAGAAATGTGAGAATTGTGAGGTAAAACATGttaattttcttaataaaaaaaaaaaggtaaatgtctttttatccCATAGTTTAGACTTTTTTACTGCAAATTCAAGTTAAACCTTTTTACTAATTCTATCCAAATCACGAGAGAAAAGCAACAGTTACCCCTTTTtatcagtattaaaaaaaaaaacaacaaattttctctctcttgtgtTTTAAGTTTGTCTCGCAACTGAGTTCGTCTTAAAATTAAGGGTTGAGAAccgtttagaaaaaaaacttgcGCAAAACCTTTTAAATGGAAGTTTATTTATCTCGACTGAGAGGAAAAagtcacattattattttttttttaatatataaaaaaaaaggtaattgacACTCTCACTTTGGGTCACTTTTTCTCAGAAtctcacatttttatttcagtcagtcTTGCAATTGAGTTTTTTAATGTTCAGCTGAGAGAACAAAGTGtgtcaaattaatttgaaggtaactttttttttttattctgtcgCAGAAATAAGCTTCCGCGGATGTGAGATCAGTTTGCCTGCGTCTCATTCATTTGTAATGCGACCTCTGATCAGTGTGAAGGAGCAGTTTGGAGCGTTGCCTGGTGGCCTTCCTCAAGCGTGATCTGTATTGCCTTACGTGTGTGTTGTAACCTGATGGAAGTGAGGTGCAGTATATTTCCTCCTGCAATGAAGTGCTAATCAAAACTTGACCCTTTTACACACCCTTATATTAACTGGCCGTTGTTCTATTACACTTCTTTTTCCTCTATCGTATATTTTTCACTTCTTCTATATTTGTTTCAGCCAGGATTGATTATAATTACCCAGTTATTATCAAGTGGGTTTCTTCAGGTAGGAAATGTAGCACtatgtattttttggttttgactGAAAACCTGGAAAATTTGGATATTAGACAAAGTCAGTTTTCTGGCTGATCGCGAATGCAATATTCACTAGACATGTCCCGCCATTCATTGTATCTCCTCCGAGATTTCAGTTATCTAACATTGTGCCTTGCAGAATCACTGATTGTATCATCCAACATGGATGCAAGTAATATTCTGTAATCTGTACAGAACGTGACTGAAGTATGAGTTTATTAAAAAGTGCAGCACTTACA
>XM_043219279.1
GCAAAGCACTGTGGGTAGACGTCCTACGCCCAAAATGGCGGCAGGATTGAAAagtttgttgctgtttttgttttattttatggcattttatCGTCCTGTGTCCCCTTCTGAATAAATCCCTATATTTATCACAGTTAAGAAGGTTGGTCGTTTGTTTCCGATCCACGAAGGCGTGATTTGGATCggtgttttgtttagtttagctCGGTAAAGCGCCTCCTCCGTGGACGCGTACGAGGCAGATGGCTCTGAACTCGTGGATATCACTGCGTCTCATACGATTAAAATGAAGAGCATTTGTACATAGAGATGGAGGATGACGTAAAGAAAGTCAAAAAGccaGGTATTGTGTCTCCGTTCAAGCGGGTGTTTCTGAAAGGAGAGAAGGGGAGAGATAAGAAGGCTCTGGAGAAGTCCACCGAGCGCAGGGCCCTCCACaccttctccctctctctcccggACCACCGTATCGACCCAGAGATTCTGCTCAATGACTACATTGAGAAGGAAGTTAAGTACCTGGGACAGCTGACCTCAGTTCCTGGATATCTGAATCCCTCCAGCCGCACAGAAGTTCTGCAGCTTATTGACAATGCCAGGAAGTCTCATCAGTTGGCAGGGCAGCTGACATCAGAGCAGGATGCTGTTGTCAGTTTGTCGGCATACAATGTGAAGCTTGTGTGGCGCGACGGAGAAGACATCATTCTTCGCGTACCCATACATGACATCGCAGCTGTGTCCTACATCAGAGACGACTCGCTCCACCTCGTGGTGCTAAAAACGGCTCAGGAGCCCGGTGGTTCTCCATGTCATAGTACAGAGATGTCAAAGTCTCCCACTCTGAGCTCTCTTTCGGAGAGCGGGGCTGTGCTTGTGGAGGTCTGCTGTCTGCTTGTGCTGGCAGTCGACAATAAGGCTGCGGCAGAGGAGCTGTGTCTTCTGCTTAGTCAAGTCTTCCAGATTGTCTACACAGAGTCCACCATTGACTTCCTGGACAGGGCCATCTTTGATGGAGCCACAACCCCCATCAGGCATCTCTCGATCTGCAGCGagGACTCCTCGAGCAAAGATGTCAAAGAAGTGTTTGAGGCCGAGGCGAGCACATTTACTTTTTCTAGTTCTCTAGAGGCGGGACACTCCTCTAGCCCCTCCCCCTCCTCCACCCCGGCCTCGCCGCAAACCATAACAGCCAGTGAGAGTGAACTAAGCACAACGGCTGCTGAACTGCTACAAGACTACATGACTACATTGAGGACAAAGCTGTCATCTCAGGAGATACAGCAGTTTGCCACACTGTTACGCGAGTACAGAAACGGAGCCTCCATCCATGAGTTCTGCATCAACCTGCGGCAGCTTTATGGAGACAGCAGGAAGTTCCTCCTCTTGGGACTGCGGCCTTTCATTCCTGAGAAGGACAGCCAGCACTTTGAGAACTTTTTGGAAACCATCGGCGTGAAGGACGGCCGCGGCATCATAACGGACAGCTTTGGGCGTTACAAACGTACGACAAGCTCTGCGTCAGACTCCACCACTAACGGAAACGGTGCTGCGGGCGGCTCGGACGAAGGAACGGCCACCTCTGAGGGCGACGAATGGGACCGCATGATTTCAGACATAAGCAATGACATTGAAGCGTTAGGAAGCAGTATGGACCAGGACGGCGTGTCGTCTTGATGTCACGGCACTGGAAATAAGCTTCCGCGGATGTGAGATCAGTTTGCCTGCGTCTCATTCATTTGTAATGCGACCTCTGATCAGTGTGAAGGAGCAGTTTGGAGCGTTGCCTGGTGGCCTTCCTCAAGCGTGATCTGTATTGCCTTACGTGTGTGTTGTAACCTGATGGAAGTGAGGTGCAGTATATTTCCTCCTGCAATGAAGTGCTAATCAAAACTTGACCCTTTTACACACCCTTATATTAACTGGCCGTTGTTCTATTACACTTCTTTTTCCTCTATCGTATATTTTTCACTTCTTCTATATTTGTTTCAGCCAGGATTGATTATAATTACCCAGTTATTATCAAGTGGGTTTCTTCAGGTAGGAAATGTAGCACtatgtattttttggttttgactGAAAACCTGGAAAATTTGGATATTAGACAAAGTCAGTTTTCTGGCTGATCGCGAATGCAATATTCACTAGACATGTCCCGCCATTCATTGTATCTCCTCCGAGATTTCAGTTATCTAACATTGTGCCTTGCAGAATCACTGATTGTATCATCCAACATGGATGCAAGTAATATTCTGTAATCTGTACAGAACGTGACTGAAGTATGAGTTTATTAAAAAGTGCAGCACTTACA
>XM_043219280.1
CGCAAAGCACTGTGGGTAGACGTCCTACGCCCAAAATGGCGGCAGGATTGAAAagtttgttgctgtttttgttttattttatggcattttatCGTCCTGTGTCCCCTTCTGAATAAATCCCTATATTTATCACAGTTAAGAAGGTTGGTCGTTTGTTTCCGATCCACGAAGGCGTGATTTGGATCggtgttttgtttagtttagctCGGTAAAGCGCCTCCTCCGTGGACGCGTACGAGGCAGATGGCTCTGAACTCGTGGATATCACTGCGTCTCATACGATTAAAATGAAGAGCATTTGTACATAGAGATGGAGGATGACGTAAAGAAAGTCAAAAAGccaGGTATTGTGTCTCCGTTCAAGCGGGTGTTTCTGAAAGGAGAGAAGGGGAGAGATAAGAAGGCTCTGGAGAAGTCCACCGAGCGCAGGGCCCTCCACaccttctccctctctctcccggACCACCGTATCGACCCAGAGATTCTGCTCAATGACTACATTGAGAAGGAAGTTAAGTACCTGGGACAGCTGACCTCAGTTCCTGGATATCTGAATCCCTCCAGCCGCACAGAAGTTCTGCAGCTTATTGACAATGCCAGGAAGTCTCATCAGTTGGCAGGGCAGCTGACATCAGAGCAGGATGCTGTTGTCAGTTTGTCGGCATACAATGTGAAGCTTGTGTGGCGCGACGGAGAAGACATCATTCTTCGCGTACCCATACATGACATCGCAGCTGTGTCCTACATCAGAGACGACTCGCTCCACCTCGTGGTGCTAAAAACGGCTCAGGAGCCCGGTGGTTCTCCATGTCATAGTACAGAGATGTCAAAGTCTCCCACTCTGAGCTCTCTTTCGGAGAGCGGGGCTGTGCTTGTGGAGGTCTGCTGTCTGCTTGTGCTGGCAGTCGACAATAAGGCTGCGGCAGAGGAGCTGTGTCTTCTGCTTAGTCAAGTCTTCCAGATTGTCTACACAGAGTCCACCATTGACTTCCTGGACAGGGCCATCTTTGATGGAGCCACAACCCCCATCAGGCATCTCTCGATCTGCAGCGagGACTCCTCGAGCAAAGATGTCAAAGAAGTGTTTGAGGCCGAGGCGAGCACATTTTCTCTAGAGGCGGGACACTCCTCTAGCCCCTCCCCCTCCTCCACCCCGGCCTCGCCGCAAACCATAACAGCCAGTGAGAGTGAACTAAGCACAACGGCTGCTGAACTGCTACAAGACTACATGACTACATTGAGGACAAAGCTGTCATCTCAGGAGATACAGCAGTTTGCCACACTGTTACGCGAGTACAGAAACGGAGCCTCCATCCATGAGTTCTGCATCAACCTGCGGCAGCTTTATGGAGACAGCAGGAAGTTCCTCCTCTTGGGACTGCGGCCTTTCATTCCTGAGAAGGACAGCCAGCACTTTGAGAACTTTTTGGAAACCATCGGCGTGAAGGACGGCCGCGGCATCATAACGGACAGCTTTGGGCGTTACAAACGTACGACAAGCTCTGCGTCAGACTCCACCACTAACGGAAACGGTGCTGCGGGCGGCTCGGACGAAGGAACGGCCACCTCTGAGGGCGACGAATGGGACCGCATGATTTCAGACATAAGCAATGACATTGAAGCGTTAGGAAGCAGTATGGACCAGGACGGCGTGTCGTCTTGATGTCACGGCACTGGGTCAGTGACTCGCTGCGTGCTTTAGCCAATCACCACTTGAGATAATCACATGGGCCATCGGTTCATATTGCTGTCCATCAAATCTGACAATGCTGGAGTTCGGATACTGTATGGATACCACTTCCTGGCCATCCTCCTTATTTTTATACGTTGTGCCATATTAACACGAGCagattttttcagattttgagAATTGTGATTTTTCAAGATCTGCGATAGAAGGATCATGTATTGCTGTGGACAGCAGTTGTGTTCTTCTGGGATGTTTATTGGCAGTATCTGCTACCACTAATGAGAGACCTTGTTGCTGGTAGATCTTGCTCTTCGCGCTGATCCGAAAGCTTATTTCCACCACAGAATACAAAGAGCTTGttaccatttattttacacttttactttttttcccccctcacaGTTCTGACAGaatctcagaattgtgagatataaaatgTCAGAACttacaattatacatttataactaAATTGAGAGAAATGTGAGAATTGTGAGGTAAAACATGttaattttcttaataaaaaaaaaaaggtaaatgtctttttatccCATAGTTTAGACTTTTTTACTGCAAATTCAAGTTAAACCTTTTTACTAATTCTATCCAAATCACGAGAGAAAAGCAACAGTTACCCCTTTTtatcagtattaaaaaaaaaaacaacaaattttctctctcttgtgtTTTAAGTTTGTCTCGCAACTGAGTTCGTCTTAAAATTAAGGGTTGAGAAccgtttagaaaaaaaacttgcGCAAAACCTTTTAAATGGAAGTTTATTTATCTCGACTGAGAGGAAAAagtcacattattattttttttttaatatataaaaaaaaaggtaattgacACTCTCACTTTGGGTCACTTTTTCTCAGAAtctcacatttttatttcagtcagtcTTGCAATTGAGTTTTTTAATGTTCAGCTGAGAGAACAAAGTGtgtcaaattaatttgaaggtaactttttttttttattctgtcgCAGAAATAAGCTTCCGCGGATGTGAGATCAGTTTGCCTGCGTCTCATTCATTTGTAATGCGACCTCTGATCAGTGTGAAGGAGCAGTTTGGAGCGTTGCCTGGTGGCCTTCCTCAAGCGTGATCTGTATTGCCTTACGTGTGTGTTGTAACCTGATGGAAGTGAGGTGCAGTATATTTCCTCCTGCAATGAAGTGCTAATCAAAACTTGACCCTTTTACACACCCTTATATTAACTGGCCGTTGTTCTATTACACTTCTTTTTCCTCTATCGTATATTTTTCACTTCTTCTATATTTGTTTCAGCCAGGATTGATTATAATTACCCAGTTATTATCAAGTGGGTTTCTTCAGGTAGGAAATGTAGCACtatgtattttttggttttgactGAAAACCTGGAAAATTTGGATATTAGACAAAGTCAGTTTTCTGGCTGATCGCGAATGCAATATTCACTAGACATGTCCCGCCATTCATTGTATCTCCTCCGAGATTTCAGTTATCTAACATTGTGCCTTGCAGAATCACTGATTGTATCATCCAACATGGATGCAAGTAATATTCTGTAATCTGTACAGAACGTGACTGAAGTATGAGTTTATTAAAAAGTGCAGCACTTACA
>XM_043219281.1
TAGCCCTCATTTGTCACAAGCCACATGCAACCTGTTTTGAGAGCAGCGCGCAACAGTAGACGACGGTTGCATACGACAGCTGTCTCGGGCAGCCGGTTTCCATTGTGCTGTCGAAGTGACCGATCATGGAGACGGAGccaGGTATTGTGTCTCCGTTCAAGCGGGTGTTTCTGAAAGGAGAGAAGGGGAGAGATAAGAAGGCTCTGGAGAAGTCCACCGAGCGCAGGGCCCTCCACaccttctccctctctctcccggACCACCGTATCGACCCAGAGATTCTGCTCAATGACTACATTGAGAAGGAAGTTAAGTACCTGGGACAGCTGACCTCAGTTCCTGGATATCTGAATCCCTCCAGCCGCACAGAAGTTCTGCAGCTTATTGACAATGCCAGGAAGTCTCATCAGTTGGCAGGGCAGCTGACATCAGAGCAGGATGCTGTTGTCAGTTTGTCGGCATACAATGTGAAGCTTGTGTGGCGCGACGGAGAAGACATCATTCTTCGCGTACCCATACATGACATCGCAGCTGTGTCCTACATCAGAGACGACTCGCTCCACCTCGTGGTGCTAAAAACGGCTCAGGAGCCCGGTGGTTCTCCATGTCATAGTACAGAGATGTCAAAGTCTCCCACTCTGAGCTCTCTTTCGGAGAGCGGGGCTGTGCTTGTGGAGGTCTGCTGTCTGCTTGTGCTGGCAGTCGACAATAAGGCTGCGGCAGAGGAGCTGTGTCTTCTGCTTAGTCAAGTCTTCCAGATTGTCTACACAGAGTCCACCATTGACTTCCTGGACAGGGCCATCTTTGATGGAGCCACAACCCCCATCAGGCATCTCTCGATCTGCAGCGagGACTCCTCGAGCAAAGATGTCAAAGAAGTGTTTGAGGCCGAGGCGAGCACATTTACTTTTTCTAGTTCTCTAGAGGCGGGACACTCCTCTAGCCCCTCCCCCTCCTCCACCCCGGCCTCGCCGCAAACCATAACAGCCAGTGAGAGTGAACTAAGCACAACGGCTGCTGAACTGCTACAAGACTACATGACTACATTGAGGACAAAGCTGTCATCTCAGGAGATACAGCAGTTTGCCACACTGTTACGCGAGTACAGAAACGGAGCCTCCATCCATGAGTTCTGCATCAACCTGCGGCAGCTTTATGGAGACAGCAGGAAGTTCCTCCTCTTGGGACTGCGGCCTTTCATTCCTGAGAAGGACAGCCAGCACTTTGAGAACTTTTTGGAAACCATCGGCGTGAAGGACGGCCGCGGCATCATAACGGACAGCTTTGGGCGTTACAAACGTACGACAAGCTCTGCGTCAGACTCCACCACTAACGGAAACGGTGCTGCGGGCGGCTCGGACGAAGGAACGGCCACCTCTGAGGGCGACGAATGGGACCGCATGATTTCAGACATAAGCAATGACATTGAAGCGTTAGGAAGCAGTATGGACCAGGACGGCGTGTCGTCTTGATGTCACGGCACTGGGTCAGTGACTCGCTGCGTGCTTTAGCCAATCACCACTTGAGATAATCACATGGGCCATCGGTTCATATTGCTGTCCATCAAATCTGACAATGCTGGAGTTCGGATACTGTATGGATACCACTTCCTGGCCATCCTCCTTATTTTTATACGTTGTGCCATATTAACACGAGCagattttttcagattttgagAATTGTGATTTTTCAAGATCTGCGATAGAAGGATCATGTATTGCTGTGGACAGCAGTTGTGTTCTTCTGGGATGTTTATTGGCAGTATCTGCTACCACTAATGAGAGACCTTGTTGCTGGTAGATCTTGCTCTTCGCGCTGATCCGAAAGCTTATTTCCACCACAGAATACAAAGAGCTTGttaccatttattttacacttttactttttttcccccctcacaGTTCTGACAGaatctcagaattgtgagatataaaatgTCAGAACttacaattatacatttataactaAATTGAGAGAAATGTGAGAATTGTGAGGTAAAACATGttaattttcttaataaaaaaaaaaaggtaaatgtctttttatccCATAGTTTAGACTTTTTTACTGCAAATTCAAGTTAAACCTTTTTACTAATTCTATCCAAATCACGAGAGAAAAGCAACAGTTACCCCTTTTtatcagtattaaaaaaaaaaacaacaaattttctctctcttgtgtTTTAAGTTTGTCTCGCAACTGAGTTCGTCTTAAAATTAAGGGTTGAGAAccgtttagaaaaaaaacttgcGCAAAACCTTTTAAATGGAAGTTTATTTATCTCGACTGAGAGGAAAAagtcacattattattttttttttaatatataaaaaaaaaggtaattgacACTCTCACTTTGGGTCACTTTTTCTCAGAAtctcacatttttatttcagtcagtcTTGCAATTGAGTTTTTTAATGTTCAGCTGAGAGAACAAAGTGtgtcaaattaatttgaaggtaactttttttttttattctgtcgCAGAAATAAGCTTCCGCGGATGTGAGATCAGTTTGCCTGCGTCTCATTCATTTGTAATGCGACCTCTGATCAGTGTGAAGGAGCAGTTTGGAGCGTTGCCTGGTGGCCTTCCTCAAGCGTGATCTGTATTGCCTTACGTGTGTGTTGTAACCTGATGGAAGTGAGGTGCAGTATATTTCCTCCTGCAATGAAGTGCTAATCAAAACTTGACCCTTTTACACACCCTTATATTAACTGGCCGTTGTTCTATTACACTTCTTTTTCCTCTATCGTATATTTTTCACTTCTTCTATATTTGTTTCAGCCAGGATTGATTATAATTACCCAGTTATTATCAAGTGGGTTTCTTCAGGTAGGAAATGTAGCACtatgtattttttggttttgactGAAAACCTGGAAAATTTGGATATTAGACAAAGTCAGTTTTCTGGCTGATCGCGAATGCAATATTCACTAGACATGTCCCGCCATTCATTGTATCTCCTCCGAGATTTCAGTTATCTAACATTGTGCCTTGCAGAATCACTGATTGTATCATCCAACATGGATGCAAGTAATATTCTGTAATCTGTACAGAACGTGACTGAAGTATGAGTTTATTAAAAAGTGCAGCACTTACA

Function

symbol description
ccm2 Acts upstream of or within several processes, including cell-cell junction assembly; circulatory system development; and heart contraction. Predicted to be located in cytoplasm. Is expressed in several structures, including cardinal system; heart; intermediate cell mass of mesoderm; liver; and ventricular zone. Human ortholog(s) of this gene implicated in cerebral cavernous malformation 2. Orthologous to human CCM2 (CCM2 scaffold protein).

NR:

description
cerebral cavernous malformations 2 protein

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0007043 cell-cell junction assembly biological_process
GO:0001570 vasculogenesis biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219278.1 True 3315 mRNA 0.44 10 10638226 10648647
XM_043219279.1 False 2308 mRNA 0.48 11 10638226 10648647
XM_043219280.1 False 3304 mRNA 0.44 10 10638226 10648648
XM_043219281.1 False 3113 mRNA 0.44 10 10638226 10645293

Neighbor

gene id symbol gene type direction distance location
enpp5 LOC107701510,LOC107684795,LOC107589043,LOC107746078,LOC107723350,LOC107561943 coding downstream 11182 10621180 ~ 10627044 (-)
cdc42bpb cdc42bpb,LOC107684799,LOC107746049,LOC107723369,LOC107701514 coding downstream 87653 10494086 ~ 10550573 (-)
vipas39 vipas39,LOC107723381,LOC107746035,LOC107701516,LOC107572140 coding downstream 144991 10484506 ~ 10493235 (-)
gpr132b LOC107561042,LOC107723405,LOC107701477,LOC107684800,LOC107746348,LOC107572145 coding downstream 153866 10477689 ~ 10484360 (-)
psma8 psma8,LOC103029839,LOC100304914,LOC107572146,LOC107723426 coding downstream 175789 10459191 ~ 10462437 (-)
xkr6b xkr6b,LOC107723320,LOC107684793,LOC107589046,LOC107746102,LOC107701509,LOC108258067,LOC105897758,LOC108435015,LOC103023855 coding upstream 398 10649046 ~ 10699432 (-)
si:dkey-71h2.2 si:dkey-71h2.2,LOC107589054,LOC107697321,LOC107723250,LOC107701504,LOC107746162 coding upstream 190498 10839146 ~ 10870735 (-)
si:ch211-278j3.3 LOC107589055,LOC107723221,LOC107746185,LOC107561935,LOC107701501 coding upstream 223191 10871839 ~ 10888227 (-)
snx17 snx17,LOC107723180,LOC107701503,LOC107746210 coding upstream 247340 10895988 ~ 10922882 (-)
eif2b4 eif2b4,LOC107723173,LOC107589057,LOC107697314,LOC107701499,LOC107561932 coding upstream 276815 10925463 ~ 10932315 (-)
G137466 fam167ab,LOC107746085,LOC107684816,LOC107589044,LOC107561944,LOC107701512,LOC107723535 non-coding downstream 3455 10633850 ~ 10634771 (-)
G137465 fam167ab,LOC107723535,LOC107684816,LOC107589044,LOC107746085,LOC107561944 non-coding downstream 6962 10630721 ~ 10631264 (-)
G137462 NA non-coding downstream 17285 10618935 ~ 10620941 (-)
G137461 NA non-coding downstream 26771 10609843 ~ 10611455 (-)
G137448 NA non-coding downstream 75765 10556745 ~ 10562461 (-)
G137468 NA non-coding upstream 70146 10718794 ~ 10720911 (-)
G137559 NA non-coding upstream 104199 10752847 ~ 10753258 (-)
G137560 NA non-coding upstream 105309 10753957 ~ 10754191 (-)
G137573 rp1l1b,LOC107589053,LOC107723476,LOC107684790,LOC107561938,LOC107746156 non-coding upstream 130482 10779130 ~ 10779406 (-)
G137578 LOC107684790,LOC107723476,LOC107589053 non-coding upstream 137305 10785953 ~ 10786335 (-)
G137451 NA other downstream 67489 10567297 ~ 10570737 (-)
G137330 NA other downstream 699349 9937965 ~ 9938877 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other downstream 886843 9697662 ~ 9751383 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other downstream 937688 9691124 ~ 9700538 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other downstream 1303165 9325653 ~ 9335061 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other upstream 73273 10721921 ~ 10724069 (-)
LOC122324412 nme6,LOC107589089,LOC107697297,LOC107723520 other upstream 482776 11131424 ~ 11136612 (-)
LOC122325476 cdh2,-,cdh4,LOC107561048,LOC107746014,LOC107571545,LOC107701519,LOC107684812,LOC108416271,LOC107656023,LOC107590155,LOC107728629,LOC107739294,LOC107553647 other upstream 493297 11141945 ~ 11182183 (-)
gsx2 gsx2,LOC107601899,LOC107597471,LOC107683998,LOC107755223,LOC107718430 other upstream 718275 11366923 ~ 11368490 (-)
G137773 LOC107755215,LOC107683983,LOC107601925,LOC107718419,LOC107665290,LOC107597464 other upstream 1033757 11682405 ~ 11683318 (-)

Expression


Co-expression Network