man1a1 (man1a1,LOC107727625,LOC107697158)


Basic Information

Item Value
gene id man1a1
gene name man1a1,LOC107727625,LOC107697158
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 23628261 ~ 23724208 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219282.1
CGCCAACGAGACTTTACACAGATGTGTTTCAGGCGTGATCAGTTGAGGCGGCAGGACTCCGTTCGCGCAGCGGGATCAACTTCTTTCGGAGGATCTACCGTCTCCTCTTCGGACGCGCCGAGTTCAATGTAACAGGTATCGTGAGCGGCGCGGGTCAAGGTGATCGGGGAGTTACTTTGTGGCAGAATTGAACACGTTTAGACGGGGTTTTTAAACGCAGAAGAAAATGCCTGTAGCTTCTCTCCTGCCTTTCACGGCCACTCCGAATAGGAAGTCCGCCAGCCCGACCTCCTTCAGGCTCACGGAGAAATTCATCTTGCTTTTGGTGTTCAGCGCCTTCATCACCCTGTGTTTCGGGGCTATCTTCTTCTTGCCGGATTCCTCAAAGCTGCTCAGCGGAGTTTTCTTCCGCTCGTCGTCGGTGGAGGCAGAGACGCGCGCAGGTACGGTCAGCGACACCAGCACCGGCGCGGGCAAGGATGAGAAGATCCTGGCCAAGATCAAGAAAGACCACGAAAAGGCGCTGATCGAGGCCAAGGACACCCTACAGAAGCGGCCGGACGAGATCAAGCGGGACATCAACAGCGACAAGGCGAAACTTGCGCAGAGCGGACCGGAGAACGGGGCGAAAGCTGACAGCTTGCCGTTCGTGCAGTACGCGCGGCCGCCCGGATCAACAGGGCGCGAGCCCGCCGATCCCGACGTTAAAGCGAAAAGAGCCAAGATTAAAGAGATGATGCAGTTTTCTTGGGACAATTACAAGCGCTACGCCTGGGGCTCCAACGAACTGCGTCCCGTCTCTAAGCAGGGCCACTCCAGCAATTTGTTTGGAAGTCTCAAAGGAGCCACCATTGTGGATGCGCTGGACACGCTCTACATTATGGAGATGTATGACGAGTTTGAGGCTGCTACCGAGTGGGTGGAAAGGAACCTAGACTTTAACATGAATGCCGAAATCTCCGTCTTTGAAGTGAACATCCGTTTTGTTGGAGGCCTGCTGTCCGCCTATTATCTCTCAGGCAAAGAGGTGTTCAGGAGAAAAGCTGTTGAACTAGGAGAGAAGCTGCTGCCTGCTTTCAAGACCCCGACCGGCATCCCCTGGGCTCTTCTCAACCTAAAGAGTGGGATTGGCAGAAACTGGCCATGGGCGTCAGGCGGAAGCAGTATTCTCGCCGAATACGGGACGCTGCATTTGGAGTTCATGCATCTGAGCGAGCTTTCCAGGAGACCAGTTTTCGCAGAGAAGGTAATGAACATCAGAAAAGTGCTGAATCGACTGGACAAACCTCAAGGGTTGTACCCGAATTACCTGAACCCTAACAGTGGACAGTGGGGCCAGCATCACGTCTCGGTTGGAGGCTTGGGGGACAGCTTCTACGAGTACCTGCTGAAGGCCTGGCTCATGTCAGACAAAACTGACGAAGAGGGAAAGAAGCTTTACTACGACGCCCTGCAGGCGATTGAGAAGAATTTGATCCGTAAATCAAGCGGAGGGTTGACGTATATCGCTGAATGGAAGGGCGGACTCCTGGAGCATAAGATGGGTCACCTGACCTGCTTCGCCGGTGGTATGATCGCTTTAGGGGCGGACGGAGGCCCCGATGATAAGACGGGTCACCAGATGGAGCTGGCGGCTGAGATCGCCCGCACATGTCACGAGTCTTACGCCCGAACAAgtatgAAGCTGGGTCCCGAGGCCTTCCGTTTCGACGGCGGCGTAGAAGCCATCGCCACGCGACAAAACGAGAAGTACTTCATCCTGAGGCCGGAGGTCATCGAGACCTACATGTACATGTGGAGGTTCACCCACGACCCCAAATACAGACAGTGGGGCTGGGAGGCGGTGCAGGCTCTGGAGAAGTACTGCAGGGTGGAAGGAGGTTACAGCGGAGTGAGAGACGTCTATGCTAACACTCCCAACCATGATGACGTGCAACAGAGCTTCTACCTGGCTGAAACGCTCAAgtATCTGTATCTTTTGTTTTCCGACGATGACCATTTGCCCTTCGAACACTGGGTGTTCAACACGGAGGCCCATCCTCTTCCCGTCATTAAGAAACAGAACCTAGAAATAGAGAACCATCTCAAGTAATCTTCATCCAACCCCAAAGCGCCGCAGAGACGCAACTTCCTGGACCTGCTTTAACGGTGGACAAGAGCTATGGACGCGAAACCCCTGTGGCTGTAGAGTTCCTGTCCTCCAGGACTTTATCTGGAGCTTGGTGTTTCTCCACAGCCACCTCTCCTCTTCCGTCTCTCTTCTCGGGATCCCGCATGCTGCcccgtccccctctctctctgtcctcgaAGCTATGGACACGTCTCTGAGCCTCAGAGACGCAGAAGGACCATATTTCCTCTGTGAGGAGACCGGACCAGACCATTTTCCATCGTACTTGTCCTCTCACCCATGTTATGAAGCCATAGGTAATTCGAATTGCATCGACGTCCTTCTGTTTTTTGCATCGTGTGCGTTTACAGGAGCGAAGATGAGAGAGATCCACTGAACTTCGCTGTATCTTGCtgtctatttttattgtaatttttgggatGAGGTTTGGTTCGGTTTTTTGAGGCTTTATTCGACAGCAAGGTAGTGAAACCAAGTCAACTAGTGCCTTTTAGTCTTATCGATCATATTAATCAACTTTTAATAGCAACACTATATTTATTTTCGCTGTGAAGGTATCTTCCTACCGGCCTACAGCCCTCTTACCCTCATTATGGATGTAAGAATCAGTCGTTTATCGTTCATTCCTCTACATTTGTGAGCttatttgttcataaaatgtgtacaaaatgtgttttgattgtTTACTTAATCAACGGAAGCAGAGACTTTTTATCTTAGACGTGTAAAATAGAGTACTTTGTGTTAATTTATTACTCAAGATATggggtttgtttctttttttcagtgagGAGGGGACTATGGAAACTGTGGGGCCCCTAAAGGAGATGataggaaaaaatatatgaCCAGAgggaaaaattacatttcaatgttttttttcgaTTCGTTGCAAAACTATTGCGTTTTCCCAAGAAGCTTTGGGTTCACTCATGAACACTGAAATACTGTAGTCTtttctttatctctttttttttgttgttgttattttaaattgcgcAGAAATTCAGAAACCCCAAAATTTTCTTCGGCAAACGTTTTGCGAGCAAGGAAAAAAATTCTTTTGTGGAACGCAAGCAAGTTTCCTTGTCggcaagaaacatttcttgggAATGCAAAAAAGGAAATCGTGAAAGGAAAAGATTTTATGAGCAAAATTTAGTGATTTTTGTGAGCGACGTCAAAAGATTCTCTGCGGAATGCAGAAGGTTCGCGAGAGAACACAAAagtttgtgggaaaaaaaaacgtttttgtgaATGAATGTAGAGTTATTCTGCGCTACGCAAAACTTCTTTATTTTCGAGCAATTGCAAAAGTTTTGCTAACAGGCGCAAAAGTTATTTTCACAGACGAACAcgtaatttttacaaaaatttctGTGGAAATACAAAGTTCTGTGAATTGCCAGTGTTTCCAACTGCTGAGTTtcttaaaagtaacacattttttacatttttctgatcgaacccaaaggttttttttgaggGAATGCAAAGGTTTTGTACACATAAGCAttgaaatcaattttttttctcccgtcTAATCACCATGTCCCTTTAGGAGCCCTGCAGTAAACTGCGTCGAAGCTGCTTGAGTCCATaggaaaagtgttttattaggACAACGCGGGCAGCATCGGTCGAAAAGGGGAGtgaatatatttgtatgaatGTACCACCAAATGTGAATTGAACATACTTTGGCCTAGTTGTTGTGATTTATCATttacctgtttgtttgttcgtttgttcCTTTGATTTATCATGAAAGCACAAAGTTCAGAATCAGTATATTTGGGTTCTCCGTGAAGAAAAGGATGGGAATTTTACTGTAGGGCCACGTGACGGCACAAGTGAGGAATTTCGattaaaaaatagcaaaacgATGAATGCAAAGCAGTCCATGGCACtggaaacaacacacacacacacacacacacatgaatcaCATACACTACATCTATTACACATTACATAGCCACACTGGCTTTGAGAAATGGACCGATTCCCATCTTATTAGTATGTGTTGGGAATTTGAGGAGTGCAAGCGTCTACATTTAGACAGTGTTCCCAAAACTACGCCAAACGACACCACCCTGCTTAACTGGCACGTCGTGGCGGTTTTAACCTACGTATTATACTAGTGGATTTATGTGGAAACAAATACCTCGCAGAGATTCCTCTCTTGAGGCCAGCGACTGCAACGCTTGACGTGCTAACGAACAGCGTACTGTCAGAGTTAGGAGCCGCGATGTACACGAAAGTACCGCCATCTTAAGGGAGGCCCGTCATGAAACACTGTGACACTGTAGATAAGACATCGCGCTCACTGTATTCACGATACTGCGAATCTAATCGATGTTTAGCACTGCCGCGGCTAGCGACTGGTCCTGTCTCTTTAGCGAAAGCGATTCCTCGAGCAGCGGTCCTCGGCTGGCTTTCGGGGGGAAAAGACGTTTCCTCGCGTCCGGTGGCGGTGCGCAGAACAGGAGAACGTGCTTTTCAGATTAAGGATTTGTCGTTTAAATATTGTGTTGATGATCTTGCATAGaaaatgccttttttgtttgtgattctcgttgtttatttcttcatgaGACAACCTCAAAAATGTAACTGTACAATATTGCTGATAATCATTCCATTGCACATAGtctgatttgtttttggtttttttctttaatatatatgcaattaattttgtGGGAaagtgtttggttttgtttttttttcttttaatttttttttttaattgtatgtatCTCATTCTGGCAAACTGCCAGCCGTCATTTATATAAATCTTACGATcttatgtaataaattatattaaagagCAGCAAAGGTTTTTGATAAACTATATTTGTTACACttaaattgtgaataaaacaatcttttaatataa

Function

symbol description
man1a1 Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane and endoplasmic reticulum. Orthologous to human MAN1A1 (mannosidase alpha class 1A member 1).

NR:

description
PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IA

GO: NA

KEGG:

id description
K01230 MAN1A_C, MNS1_2; mannosyl-oligosaccharide alpha-1,2-mannosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219282.1 True 5033 mRNA 0.46 12 23628261 23724208

Neighbor

gene id symbol gene type direction distance location
fam184ab fam184a,LOC107678849,LOC107697135 coding downstream 119717 23403070 ~ 23508544 (-)
cep85l cep85l,LOC107727619,LOC107603087 coding downstream 247633 23321174 ~ 23380628 (-)
gopc gopc,LOC107727658,LOC107743304,LOC107697149,LOC107678854 coding downstream 417825 23197531 ~ 23210436 (-)
tdrd15 LOC107727677,LOC107678846,LOC107603064,LOC107743302,LOC107697132 coding downstream 518900 23100351 ~ 23109361 (-)
igf2r igf2r,LOC107727636,LOC107603065,LOC107678818,LOC107743319 coding downstream 528915 23068158 ~ 23099346 (-)
gja12.2 cx28.1,LOC107727590,LOC107675221,LOC107717169,LOC107598107,LOC107697092 coding upstream 112277 23836485 ~ 23840023 (-)
serinc1 serinc1,LOC107675227,LOC107727646,LOC107675084,LOC107602188,LOC107598085 coding upstream 221967 23946175 ~ 23952434 (-)
tmem121ab tmem121b,LOC107548420,LOC107704034,LOC107719437,LOC107669431,LOC107559097,LOC108257619 coding upstream 289942 24014150 ~ 24058837 (-)
atp6v1d atp6v1d,LOC107568214,LOC107559096,LOC107669460,LOC107726702 coding upstream 757864 24482072 ~ 24485488 (-)
rbm25b rbm25,rbm25b,LOC107704053,LOC107669447,LOC107568207 coding upstream 768544 24492752 ~ 24510530 (-)
G141404 NA non-coding downstream 56471 23570996 ~ 23571790 (-)
G141370 NA non-coding downstream 432065 23195173 ~ 23196196 (-)
G141343 NA non-coding downstream 572205 23055048 ~ 23056056 (-)
G141331 LOC107726750,LOC107678830 non-coding downstream 712309 22909257 ~ 22915952 (-)
G141324 NA non-coding downstream 734246 22888520 ~ 22894015 (-)
G141477 NA non-coding upstream 46869 23771077 ~ 23771457 (-)
G141478 NA non-coding upstream 47309 23771517 ~ 23772116 (-)
G141479 NA non-coding upstream 50709 23774917 ~ 23781508 (-)
G141481 NA non-coding upstream 59121 23783329 ~ 23783811 (-)
LOC122324337 NA non-coding upstream 141638 23865846 ~ 23868883 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other downstream 226870 23384571 ~ 23401391 (-)
G140972 NA other downstream 1515217 22112602 ~ 22113044 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 1781344 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 1783628 21842432 ~ 21844633 (-)
G140883 NA other downstream 1786793 21841113 ~ 21841468 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 61544 23785752 ~ 23823050 (-)
G141502 NA other upstream 280479 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 530185 24254393 ~ 24517743 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other upstream 799861 24524069 ~ 24532363 (-)
G141651 NA other upstream 847205 24571413 ~ 24647421 (-)

Expression


Co-expression Network