armc2 (armc2,LOC107679492,LOC107601205,LOC107696124,LOC107726616,LOC107726428,LOC107601411)


Basic Information

Item Value
gene id armc2
gene name armc2,LOC107679492,LOC107601205,LOC107696124,LOC107726616,LOC107726428,LOC107601411
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16896561 ~ 16911932 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219284.1
GCGCGTGGCCGTGGTTGACCCTGTGGAGTGCGTCCCTCTGTCTGCTTTCACACAAGCTCGTCTTTCTGGATTAAAGATGATCTCTTTAAAACATTGAAATCAAGGCCTAACGCGTTTGGAATTTAAGACCTTTTTGGTTATAAGGTAATGGACAAGGTTCCAGGCCGTTGATACCGGTACACATCCCTATGGATCAAACATGTCTTTAATGGAGCTTCAGGACAAAAGTGAGCGTGTCTACACGAGCACTGGCCTCAGGAGACAGACGAGTGCTGAGATTGTGTCAGAAGCTCGTCGCTCTCTCAGAACTCTTGCCACACAACGGCCTTTCACACCTCAGGAAAAACATCGGCAGCTCTTCGGAGAATCCTCTTCTCGTGCACATGATGGACGACCACCATCTGCATTCAGCCTACATGCCCGACATTTTGAAGCTCCTGACTCCAGGCCAGGCTCTGGAACTCGTCTCAGCCCACTGGAACGTAAGCCCAGGCTGTCTGTGTCCctggatgaggatgaggatgacgATGTTGATGAagcaactctccccaaaccccCATCTGAGCGAGGGTATACAAGGATAGGATCAGGAGGTTCTCGAGCCAGACAGCTTAGAGCAGCTTCCATAAACAGGCTACCACCAATGACACCAAACACAAagaATATGGCTCTAGAGGCAAGGATAGGAGCAGACCAACCGGGTGACAGAGAAAAGCTACGTTATTCTGATATTACAGAGCATACAACAAATTCATCCTCTGAAACAGACCTTCATATAGTTACTAAACAGAGGATAGCGCAAACTGATGTATCCAGCGCAAGAGGATCAAAACCAGAAGTCAAGCTTGGGCATGGAGACACTGGAGATGACAACATGGATGAATCTGTGTTCTGGAACTCTATAGTTCTTCCTGTCCTTCAAGAATTTGAGTCCTTTGCACCAGGTGATGCCGTGTCAGACGAGACTGTGGGAGAACTGTGTATCGCATGCAATGGTCTCCATGATGCACTGGCAGAGAGAGGCATGCTGGGAAGGCAGTTCAAAAAGAGGTCCACCATCCTTAGAACACTTTTCAGGCTTATAGATGTAGGATCGGATCGACTTAACCTAACATTAGCCAAATTTATACTTGCACTCAGTGTGAGTGGAAACAACTTGCTGAACATCTGCAAACTCGTCTTCAAAATCAGCCGGGACGCTAGTAACGATGCCCTGTTCCTCAATGGCTGCATCCTAGACTCCCTTCTGTCTCTGCTCCACTGTGAGGATGTGTGGAGTAAAGGTGAAGCCCTGTTGTACTGTGTTGGCTCACTGAAGCTCCTCTCTGGGAACAGCGCCATCTCCAGGCTGTTGCTGACAAAAGGCTTCGTTGGTGTACTGCTGCAGCTGTCAAAGAGACTGATGCATGGTCCATCTTCAACTTCTCATGGGTCAGAAGTAGGAGTAGGTCAGCCTATCATTGCTGGACACATACTGGTACAGGTCACAGCAGCTTTGAGAAATATAGCTGACCAGTCAGAGTCTCGGCCTTCCTTCCTGTCCAACAAGGCATTCTCTACTCTTTGTTTGATTCTGGAGAACCACCGCAATGACCTCGACGTCTGCATTTATGTGGCCCGAATATTTAGCAAGCTGTCCACCTACACTGAATGCTGTCATGCACTAGCTGAGACGCCACGTTGCTGCAGCCTATTTTTGGATCTGCTAGGCAAACACAGCAGGAAACAGGACCTAGTTGTGCGTCTTCTGTTCACACTAGGAAATCTGACAGCCAAGAGCACTGAAGCCAGAGAGAGAGTCTATGAGGAGGAAGGTGGGATAGATGTCCTCTTAGATCTTTTTCAGGTCTACCAGGAAACGCCATCGTCCCCTGAGCAATGCCGTGTCCCTGAGAGAGAGGACGTCCTGGTCAAACTGATCAGACTGCTGGCCAACCTGGCCATCCATCCCACCGTGGGCACGGCACTGGCTGCCAACACACTGTGTGTACAGCTGCTGCTGGAAGTGctggAGTGCATGTGCGTGCAGGAGAGTGAAGAGTTAGTGATTAATGCCGTGGCCACCATCAACAACCTGTCTTTCTACCAAGGCGAGAGCTCAGTGGTCCGttcccagcacacacacatctcacagtTGCTACTAAAGCTCTTGCTGAGCTCCAGTATGGAGGTTGTTTTGGAGGCCACACGTGTGTTTGGAAATCTGTCGCAGATCAAAGACGTGAGACACTTCATCGTGCAGCACAAAGTGGAGCAGTATGTGGTAACCCTCCTGGACTCCAAGACCCCTgatgtgtgtttctctgcatGTGGAGTTCTCATCAACCTGTCTGCAGATCCAGACAACAGGGCCATGCTGAGGGCCACGGGAACCGTCCGGAAGCTTATTGACTGTCTGCGTGACTTTGGGCCTCAGGACTGGCATTTAGCTGCTGTGGTGTGTCAGACTCTCTGGAACTGCTCTTTAGGTGGAGAGCTGCAACACACTCAAGAGATGTTGGAGATATTGCGGCTTTACGTTGACAGAGGAGCTTTGCAGTGGCCTTCTGATGATGGAGTCAGACAGGTTCAGgaagcatgctgggaacttCTCTTTTTGCCTGTAGCTGAGAGGCTTAGACAGCGTTTTTATATCGAAGACACTACTGGCATGATTTCGTAAGCTCCACTGACACGCTCCTGCTCTCTAGATGTCACAcgcttgtctgtgtgtgtatatatgtaccgTATGTTCACCTACAAGCCGAGGCATGAGTCGGTGTGTATATTGCactttaatataatgtttcttcggatattttgaatatatgttTCAGAAATTTGTCctaatttaccttttttttttttttacaaaatagttcaaatgtttat
>XM_043219285.1
GCGCGTGGCCGTGGTTGACCCTGTGGAGTGCGTCCCTCTGTCTGCTTTCACACAAGCTCGTCTTTCTGGATTAAAGATGATCTCTTTAAAACATTGAAATCAAGGCCTAACGCGTTTGGAATTTAAGACCTTTTTGGTTATAAGGTAATGGACAAGGTTCCAGGCCGTTGATACCGGTACACATCCCTATGGATCAAACATGTCTTTAATGGAGCTTCAGGACAAAAGTGAGCGTGTCTACACGAGCACTGGCCTCAGGAGACAGACGAGTGCTGAGATTGTGTCAGAAGCTCGTCGCTCTCTCAGAACTCTTGCCACACAACGGCCTTTCACACCTCAGGAAAAACATCGGCAGCTCTTCGGAGAATCCTCTTCTCGTGCACATGATGGACGACCACCATCTGCATTCAGCCTACATGCCCGACATTTTGAAGCTCCTGACTCCAGGCCAGGCTCTGGAACTCGTCTCAGCCCACTGGAACGTCCCAGGCTGTCTGTGTCCctggatgaggatgaggatgacgATGTTGATGAagcaactctccccaaaccccCATCTGAGCGAGGGTATACAAGGATAGGATCAGGAGGTTCTCGAGCCAGACAGCTTAGAGCAGCTTCCATAAACAGGCTACCACCAATGACACCAAACACAAagaATATGGCTCTAGAGGCAAGGATAGGAGCAGACCAACCGGGTGACAGAGAAAAGCTACGTTATTCTGATATTACAGAGCATACAACAAATTCATCCTCTGAAACAGACCTTCATATAGTTACTAAACAGAGGATAGCGCAAACTGATGTATCCAGCGCAAGAGGATCAAAACCAGAAGTCAAGCTTGGGCATGGAGACACTGGAGATGACAACATGGATGAATCTGTGTTCTGGAACTCTATAGTTCTTCCTGTCCTTCAAGAATTTGAGTCCTTTGCACCAGGTGATGCCGTGTCAGACGAGACTGTGGGAGAACTGTGTATCGCATGCAATGGTCTCCATGATGCACTGGCAGAGAGAGGCATGCTGGGAAGGCAGTTCAAAAAGAGGTCCACCATCCTTAGAACACTTTTCAGGCTTATAGATGTAGGATCGGATCGACTTAACCTAACATTAGCCAAATTTATACTTGCACTCAGTGTGAGTGGAAACAACTTGCTGAACATCTGCAAACTCGTCTTCAAAATCAGCCGGGACGCTAGTAACGATGCCCTGTTCCTCAATGGCTGCATCCTAGACTCCCTTCTGTCTCTGCTCCACTGTGAGGATGTGTGGAGTAAAGGTGAAGCCCTGTTGTACTGTGTTGGCTCACTGAAGCTCCTCTCTGGGAACAGCGCCATCTCCAGGCTGTTGCTGACAAAAGGCTTCGTTGGTGTACTGCTGCAGCTGTCAAAGAGACTGATGCATGGTCCATCTTCAACTTCTCATGGGTCAGAAGTAGGAGTAGGTCAGCCTATCATTGCTGGACACATACTGGTACAGGTCACAGCAGCTTTGAGAAATATAGCTGACCAGTCAGAGTCTCGGCCTTCCTTCCTGTCCAACAAGGCATTCTCTACTCTTTGTTTGATTCTGGAGAACCACCGCAATGACCTCGACGTCTGCATTTATGTGGCCCGAATATTTAGCAAGCTGTCCACCTACACTGAATGCTGTCATGCACTAGCTGAGACGCCACGTTGCTGCAGCCTATTTTTGGATCTGCTAGGCAAACACAGCAGGAAACAGGACCTAGTTGTGCGTCTTCTGTTCACACTAGGAAATCTGACAGCCAAGAGCACTGAAGCCAGAGAGAGAGTCTATGAGGAGGAAGGTGGGATAGATGTCCTCTTAGATCTTTTTCAGGTCTACCAGGAAACGCCATCGTCCCCTGAGCAATGCCGTGTCCCTGAGAGAGAGGACGTCCTGGTCAAACTGATCAGACTGCTGGCCAACCTGGCCATCCATCCCACCGTGGGCACGGCACTGGCTGCCAACACACTGTGTGTACAGCTGCTGCTGGAAGTGctggAGTGCATGTGCGTGCAGGAGAGTGAAGAGTTAGTGATTAATGCCGTGGCCACCATCAACAACCTGTCTTTCTACCAAGGCGAGAGCTCAGTGGTCCGttcccagcacacacacatctcacagtTGCTACTAAAGCTCTTGCTGAGCTCCAGTATGGAGGTTGTTTTGGAGGCCACACGTGTGTTTGGAAATCTGTCGCAGATCAAAGACGTGAGACACTTCATCGTGCAGCACAAAGTGGAGCAGTATGTGGTAACCCTCCTGGACTCCAAGACCCCTgatgtgtgtttctctgcatGTGGAGTTCTCATCAACCTGTCTGCAGATCCAGACAACAGGGCCATGCTGAGGGCCACGGGAACCGTCCGGAAGCTTATTGACTGTCTGCGTGACTTTGGGCCTCAGGACTGGCATTTAGCTGCTGTGGTGTGTCAGACTCTCTGGAACTGCTCTTTAGGTGGAGAGCTGCAACACACTCAAGAGATGTTGGAGATATTGCGGCTTTACGTTGACAGAGGAGCTTTGCAGTGGCCTTCTGATGATGGAGTCAGACAGGTTCAGgaagcatgctgggaacttCTCTTTTTGCCTGTAGCTGAGAGGCTTAGACAGCGTTTTTATATCGAAGACACTACTGGCATGATTTCGTAAGCTCCACTGACACGCTCCTGCTCTCTAGATGTCACAcgcttgtctgtgtgtgtatatatgtaccgTATGTTCACCTACAAGCCGAGGCATGAGTCGGTGTGTATATTGCactttaatataatgtttcttcggatattttgaatatatgttTCAGAAATTTGTCctaatttaccttttttttttttttacaaaatagttcaaatgtttat

Function

symbol description
armc2 Predicted to be involved in sperm axoneme assembly. Human ortholog(s) of this gene implicated in spermatogenic failure 38. Orthologous to human ARMC2 (armadillo repeat containing 2).

NR:

description
armadillo repeat-containing protein 2

GO: NA

KEGG:

id description
K24123 ARMC2; armadillo repeat-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219284.1 True 2871 mRNA 0.49 18 16896561 16911932
XM_043219285.1 False 2868 mRNA 0.49 18 16896561 16911932

Neighbor

gene id symbol gene type direction distance location
cep57l1 LOC107679495,LOC107726623,LOC107601208,LOC107696099,LOC107726414 coding downstream 37951 16855295 ~ 16858610 (-)
grm1a grm1,grm1a,LOC107679500,LOC107696122,LOC107726479 coding downstream 56499 16814705 ~ 16840062 (-)
rab32a rab32,rab32a,LOC107679502,LOC107601480,LOC107696121,LOC107726484 coding downstream 82417 16799760 ~ 16814144 (-)
adgb adgb,LOC107726608,LOC107601183 coding downstream 98084 16765715 ~ 16798477 (-)
stxbp5a stxbp5a,LOC107679494,LOC107696120,LOC107710208,LOC107726399,LOC108436475 coding downstream 136080 16691307 ~ 16760481 (-)
foxo3b foxo3b,LOC107679488,LOC107601202,LOC107726619,LOC107601425,LOC107726429,LOC107696126 coding upstream 9706 16921638 ~ 16947178 (-)
afg1lb lace1b,LOC107679503,LOC107726636,LOC107601203,LOC107726402 coding upstream 37497 16949429 ~ 16970041 (-)
nr2e1 nr2e1,LOC107602776,LOC107726424,LOC107726614,LOC107601200 coding upstream 72412 16984344 ~ 16991803 (-)
nbas nbas,LOC107602494,LOC108439588 coding upstream 240411 17152343 ~ 17286892 (-)
smek1 smek1,ppp4r3a,LOC107726626,LOC107555622,LOC107696138,LOC107698404,LOC107601285,LOC107726461 coding upstream 502535 17414467 ~ 17424811 (-)
G139149 NA non-coding downstream 178 16860326 ~ 16896383 (-)
G139148 sesn1,LOC107726430,LOC107601436 non-coding downstream 5101 16889939 ~ 16891460 (-)
G139147 sesn1,LOC107601204,LOC107679493,LOC107601436,LOC107696127,LOC107726620 non-coding downstream 36305 16859343 ~ 16860256 (-)
G139139 NA non-coding downstream 51393 16843218 ~ 16845168 (-)
G139032 NA non-coding downstream 441158 16454884 ~ 16455403 (-)
LOC122325296 NA non-coding upstream 131715 17043647 ~ 17116946 (-)
G139300 NA non-coding upstream 211954 17123886 ~ 17124259 (-)
G139301 NA non-coding upstream 212891 17124823 ~ 17125248 (-)
G139302 NA non-coding upstream 213505 17125437 ~ 17125910 (-)
G139317 NA non-coding upstream 424075 17336007 ~ 17336320 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 434345 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 529762 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 791834 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 902916 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 1051987 15844354 ~ 15844574 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 434874 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 889470 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 1431531 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 1494095 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 2342802 19254734 ~ 19256272 (-)

Expression


Co-expression Network