foxo3b (foxo3b,LOC107679488,LOC107601202,LOC107726619,LOC107601425,LOC107726429,LOC107696126)


Basic Information

Item Value
gene id foxo3b
gene name foxo3b,LOC107679488,LOC107601202,LOC107726619,LOC107601425,LOC107726429,LOC107696126
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16921638 ~ 16947178 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219286.1
CTCCTCCAGTCACTCAGTCCTAAGTTGCGCTCGCTTGAGTGCTGACAGACGATTAGAGGAGATAGTCCTACTGTGCCTTTAGACACACAGATCAGTGCAGAGAGAGAACGGGCTTCCTGAATGGGGAATTTTCCGCAATGTACCGTTCGTGACGTCGAGGCACTGGCGCGCGCTCTAACGAGACACTGTCATTAAGCCGTAGTTGCGTCTCTACCTTTAATTGTTAAAGAGACTTCGGAATGCGAAGAGACATCGGGTCAAAGTGGCTAATGACACAACGCGATCAGTGCGGTCTACGGGCACGCGTAAGTCTGCCCTCGTTATTGTAGTTGTCTTGATCTGACACAACGGCGTTTTGGATCTAACCCTCTGAACGTGCGGTGGCTCTGACAGTTCAGTTCTTTTGTCACTAGAGTGACTTGCTACTTGTGATGTAGTGCAGTGACGTTGTGGCGCTTTGTCCGTGGCTACTGGCGAAGTGCGCTGGAGAGATATAGTTGTATTACATCAGTGCACCAAGTGACTGGAGTGCGACACAGAAGACAAGAGAAACGGCTCTGGCTGAATGGTGCGTGTTCAGGAAGGGGAGTTAATTATCATTGAGATTTGCACTAGTCGCTTTAAGAAGCATTTAAGCACCATTTAGATTAGAGGTGCATTCATGGAATGCGACTGTGACCGTTTCCCACTGCCTATTTAACTTTGACCAAGACTGTACAGAGGAGCATCATAGAAGGCTGGTAGAGGTGATGGCAGAGACAACTCTGGAGCCGCTGTCCTCTCTGGATGTAGCCATCGATCCGGATTTTGAGCCACAGAAACGGCCGAGATCATGCACTTGGCCCCTGCCAGAGTCCAGCTCAGCAAAGCCTGCATCCAATGACACTGACATAATCCCggaggaagaggatgatgaggatgacAATGCGATGGCAATCAACGCCAACAGCGCGGGTGAAGGAGAGGACAATGGCAGCCCAAGCCTGGCTGAGGAACTCCATCCCGCGAGCGGTCAGGAAAACATGGGCTCCCCGCTTTCTTCTCATCCCACTTCGGCGACCACAGCGAGTCCGGAGGCGAGCGGTCAGGGCAGCCAACAGCAAACTCCCCGAAAGTCATCTTCGAGGAGAAACGCATGGGGCAACCTGTCCTACGCAGACCTTATCACAAAAGCCATAGAGAGTGCCCCAGACAAGAGACTGACACTGTCCCAGATCTACGACTGGATGGTCAGAAGCGTCCCGTACTTTAAAGACAAAGGCGACAGCAACAGCTCAGCTGGGTGGAAGAACTCCATCCGGCATAACCTGTCCTTGCATAGCCGTTTTATCCGTGTACAGAATGAGGGGACTGGAAAGAGCTCATGGTGGATGATCAATCCTGAAGGGGGCCGGGGAGGTAAAGCGCCAAGGCGACGTGCAGTCTCCATGGACAATGGTAACAAATACACCAAGACTGCACGTGGGCGTGCAGCCAAGAAAAAGGCAGCGCTGCAGGCTGCCCAAGAGGGTTCGCTGGAGAACTTATCTGCTGGTGGTCTGTCCAAGTGGCCAGGAAGTCCCACTTCCCGGAGCAGCGATGAACTGGAATCCTGTTGGACTGACTTCCGCTCACGAACAAACTCCAATGCTAGCACCCTGAGTGGACGCCTGTCACCTATCCTGGCCAATCCAGAGCTTGATGATGTTCCAGATGGCCCACCCCTGTCTCCAATGCTCTACTCCAGCCCCAGCAGTCTTTCTCCTCCCTCATCGTCTTCATCAAACTCCAAAACGTGCCCTGCTGAACTTCCAGGGCTAGCTGACTTGACTGGCACAATGAATCTCAATGAGGCCGACAACCTAATGGTTGATCTGTTGGACAACATCGCCACACAAGTGCAGGTAGTTCAAGGGTCTTCTGCATTCAGTTTTGGGACCAAGAGCACCACATCACCCACAAGCTCCTCTTCATCCCAAACTGTGAGCAACAACACCGGAGGATTCAGTAACACCATTTTTGGGTCTCCAGCAGGAGGCCTACGTCAGACGCCCATGCAGACCATCCAGGAAAACAAGCAAACATCGTTCTCCAGCGTTTCTTGTTTTGGGAATTCACTTCAGGAGCTGCTGAATTCTGATTCTTTGGTCACGCACAGTCACAGTGATGTCATGATGACGCAGTCTGACCCACTTATATCGCAGGCCAGTGCTGCCGTCACCTCTCAAAACTCCCGTCTTCGCAATGGCCTCATGCTGCGTAATGATCCCATGATGTCATCTTTCAGTTCTGTGCTCAATGGgcgaagcagccacctccaGAACAAGCAACAGGGGCCCAGTGTCCAGGGTTCTTTGCGTTCCCTCTCCAACAACAGGGCACAAAGTATAGCTAACGATGCTAATAATTTAGTCTCTGCAAAACAGCACCTCCAGCCACAACCCTCCATGTTGATGACCGAGAATTCGCTTTACTCTGGCCTGAACGGAAGTAACGGGGTGGGGATCTGTCACCCCTCAGGAACAGAACGTTTTCCATCAGATTTGGACCTGGACATGTTTAATGGCAGTCTGGATTGCGATGTGGATTCCATAATTCGCTCAGAACTAATGGACTCTGATGGACTGGACTTTAACTTTGATGCGTTGGTGCAAAACGCTGTTAGTCTGAATCCTGTGGGAAACTTCACCGGGACGAAGCAATCCACTCAAAGTTGGGTGCCTGGCTGACCGCAATCACATAGGCTCAGAACTGCAGAGAAAACAACAAACGATAGAATAACAACTACAAAGAAATATCCtgcacaaaa
>XM_043219287.1
CTCCTCCAGTCACTCAGTCCTAAGTTGCGCTCGCTTGAGTGCTGACAGACGATTAGAGGAGATAGTCCTACTGTGCCTTTAGACACACAGATCAGTGCAGAGAGAGAACGGGCTTCCTGAATGGGGAATTTTCCGCAATGTACCGTTCGTGACGTCGAGGCACTGGCGCGCGCTCTAACGAGACACTGTCATTAAGCCGTAGTTGCGTCTCTACCTTTAATTGTTAAAGAGACTTCGGAATGCGAAGAGACATCGGGTCAAAGTGGCTAATGACACAACGCGATCAGTGCGGTCTACGGGCACGCGTAAGTCTGCCCTCGTTATTGTAGTTGTCTTGATCTGACACAACGGCGTTTTGGATCTAACCCTCTGAACGTGCGGTGGCTCTGACAGTTCAGTTCTTTTGTCACTAGAGTGACTTGCTACTTGTGATGTAGTGCAGTGACGTTGTGGCGCTTTGTCCGTGGCTACTGGCGAAGTGCGCTGGAGAGATATAGTTGTATTACATCAGTGCACCAAGTGACTGGAGTGCGACACAGAAGACAAGAGAAACGGCTCTGGCTGAATGGAAGGGGAGTTAATTATCATTGAGATTTGCACTAGTCGCTTTAAGAAGCATTTAAGCACCATTTAGATTAGAGGTGCATTCATGGAATGCGACTGTGACCGTTTCCCACTGCCTATTTAACTTTGACCAAGACTGTACAGAGGAGCATCATAGAAGGCTGGTAGAGGTGATGGCAGAGACAACTCTGGAGCCGCTGTCCTCTCTGGATGTAGCCATCGATCCGGATTTTGAGCCACAGAAACGGCCGAGATCATGCACTTGGCCCCTGCCAGAGTCCAGCTCAGCAAAGCCTGCATCCAATGACACTGACATAATCCCggaggaagaggatgatgaggatgacAATGCGATGGCAATCAACGCCAACAGCGCGGGTGAAGGAGAGGACAATGGCAGCCCAAGCCTGGCTGAGGAACTCCATCCCGCGAGCGGTCAGGAAAACATGGGCTCCCCGCTTTCTTCTCATCCCACTTCGGCGACCACAGCGAGTCCGGAGGCGAGCGGTCAGGGCAGCCAACAGCAAACTCCCCGAAAGTCATCTTCGAGGAGAAACGCATGGGGCAACCTGTCCTACGCAGACCTTATCACAAAAGCCATAGAGAGTGCCCCAGACAAGAGACTGACACTGTCCCAGATCTACGACTGGATGGTCAGAAGCGTCCCGTACTTTAAAGACAAAGGCGACAGCAACAGCTCAGCTGGGTGGAAGAACTCCATCCGGCATAACCTGTCCTTGCATAGCCGTTTTATCCGTGTACAGAATGAGGGGACTGGAAAGAGCTCATGGTGGATGATCAATCCTGAAGGGGGCCGGGGAGGTAAAGCGCCAAGGCGACGTGCAGTCTCCATGGACAATGGTAACAAATACACCAAGACTGCACGTGGGCGTGCAGCCAAGAAAAAGGCAGCGCTGCAGGCTGCCCAAGAGGGTTCGCTGGAGAACTTATCTGCTGGTGGTCTGTCCAAGTGGCCAGGAAGTCCCACTTCCCGGAGCAGCGATGAACTGGAATCCTGTTGGACTGACTTCCGCTCACGAACAAACTCCAATGCTAGCACCCTGAGTGGACGCCTGTCACCTATCCTGGCCAATCCAGAGCTTGATGATGTTCCAGATGGCCCACCCCTGTCTCCAATGCTCTACTCCAGCCCCAGCAGTCTTTCTCCTCCCTCATCGTCTTCATCAAACTCCAAAACGTGCCCTGCTGAACTTCCAGGGCTAGCTGACTTGACTGGCACAATGAATCTCAATGAGGCCGACAACCTAATGGTTGATCTGTTGGACAACATCGCCACACAAGTGCAGGTAGTTCAAGGGTCTTCTGCATTCAGTTTTGGGACCAAGAGCACCACATCACCCACAAGCTCCTCTTCATCCCAAACTGTGAGCAACAACACCGGAGGATTCAGTAACACCATTTTTGGGTCTCCAGCAGGAGGCCTACGTCAGACGCCCATGCAGACCATCCAGGAAAACAAGCAAACATCGTTCTCCAGCGTTTCTTGTTTTGGGAATTCACTTCAGGAGCTGCTGAATTCTGATTCTTTGGTCACGCACAGTCACAGTGATGTCATGATGACGCAGTCTGACCCACTTATATCGCAGGCCAGTGCTGCCGTCACCTCTCAAAACTCCCGTCTTCGCAATGGCCTCATGCTGCGTAATGATCCCATGATGTCATCTTTCAGTTCTGTGCTCAATGGgcgaagcagccacctccaGAACAAGCAACAGGGGCCCAGTGTCCAGGGTTCTTTGCGTTCCCTCTCCAACAACAGGGCACAAAGTATAGCTAACGATGCTAATAATTTAGTCTCTGCAAAACAGCACCTCCAGCCACAACCCTCCATGTTGATGACCGAGAATTCGCTTTACTCTGGCCTGAACGGAAGTAACGGGGTGGGGATCTGTCACCCCTCAGGAACAGAACGTTTTCCATCAGATTTGGACCTGGACATGTTTAATGGCAGTCTGGATTGCGATGTGGATTCCATAATTCGCTCAGAACTAATGGACTCTGATGGACTGGACTTTAACTTTGATGCGTTGGTGCAAAACGCTGTTAGTCTGAATCCTGTGGGAAACTTCACCGGGACGAAGCAATCCACTCAAAGTTGGGTGCCTGGCTGACCGCAATCACATAGGCTCAGAACTGCAGAGAAAACAACAAACGATAGAATAACAACTACAAAGAAATATCCtgcacaaaa

Function

symbol description
foxo3b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within several processes, including negative regulation of canonical Wnt signaling pathway; negative regulation of defense response to virus; and primitive hemopoiesis. Predicted to be active in nucleus. Predicted to colocalize with mitochondrial matrix. Is expressed in several structures, including immune system; liver; nervous system; pericardial region; and posterior lateral mesoderm. Orthologous to human FOXO3 (forkhead box O3).

NR:

description
forkhead box protein O3

GO:

id name namespace
GO:0042127 regulation of cell population proliferation biological_process
GO:0048513 animal organ development biological_process
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0009888 tissue development biological_process
GO:0090090 negative regulation of canonical Wnt signaling pathway biological_process
GO:0008286 insulin receptor signaling pathway biological_process
GO:0007389 pattern specification process biological_process
GO:0045944 positive regulation of transcription by RNA polymerase II biological_process
GO:0009790 embryo development biological_process
GO:0005829 cytosol cellular_component
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0019901 protein kinase binding molecular_function
GO:0008301 DNA binding, bending molecular_function

KEGG:

id description
K09408 FOXO3; forkhead box protein O3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219286.1 True 2788 mRNA 0.51 4 16921638 16947178
XM_043219287.1 False 2776 mRNA 0.51 4 16921638 16947178

Neighbor

gene id symbol gene type direction distance location
armc2 armc2,LOC107679492,LOC107601205,LOC107696124,LOC107726616,LOC107726428,LOC107601411 coding downstream 9706 16896561 ~ 16911932 (-)
cep57l1 LOC107679495,LOC107726623,LOC107601208,LOC107696099,LOC107726414 coding downstream 63028 16855295 ~ 16858610 (-)
grm1a grm1,grm1a,LOC107679500,LOC107696122,LOC107726479 coding downstream 81576 16814705 ~ 16840062 (-)
rab32a rab32,rab32a,LOC107679502,LOC107601480,LOC107696121,LOC107726484 coding downstream 107494 16799760 ~ 16814144 (-)
adgb adgb,LOC107726608,LOC107601183 coding downstream 123161 16765715 ~ 16798477 (-)
afg1lb lace1b,LOC107679503,LOC107726636,LOC107601203,LOC107726402 coding upstream 2251 16949429 ~ 16970041 (-)
nr2e1 nr2e1,LOC107602776,LOC107726424,LOC107726614,LOC107601200 coding upstream 37166 16984344 ~ 16991803 (-)
nbas nbas,LOC107602494,LOC108439588 coding upstream 205165 17152343 ~ 17286892 (-)
smek1 smek1,ppp4r3a,LOC107726626,LOC107555622,LOC107696138,LOC107698404,LOC107601285,LOC107726461 coding upstream 467289 17414467 ~ 17424811 (-)
paplnb LOC107698340,LOC107555612 coding upstream 481328 17428506 ~ 17440011 (-)
G139149 NA non-coding downstream 25255 16860326 ~ 16896383 (-)
G139148 sesn1,LOC107726430,LOC107601436 non-coding downstream 30178 16889939 ~ 16891460 (-)
G139147 sesn1,LOC107601204,LOC107679493,LOC107601436,LOC107696127,LOC107726620 non-coding downstream 61382 16859343 ~ 16860256 (-)
G139139 NA non-coding downstream 76470 16843218 ~ 16845168 (-)
G139032 NA non-coding downstream 466235 16454884 ~ 16455403 (-)
LOC122325296 NA non-coding upstream 96469 17043647 ~ 17116946 (-)
G139300 NA non-coding upstream 176708 17123886 ~ 17124259 (-)
G139301 NA non-coding upstream 177645 17124823 ~ 17125248 (-)
G139302 NA non-coding upstream 178259 17125437 ~ 17125910 (-)
G139317 NA non-coding upstream 388829 17336007 ~ 17336320 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 459422 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 554839 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 816911 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 927993 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 1077064 15844354 ~ 15844574 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 399628 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 854224 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 1396285 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 1458849 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 2307556 19254734 ~ 19256272 (-)

Expression


Co-expression Network