afg1lb (lace1b,LOC107679503,LOC107726636,LOC107601203,LOC107726402)


Basic Information

Item Value
gene id afg1lb
gene name lace1b,LOC107679503,LOC107726636,LOC107601203,LOC107726402
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 16949429 ~ 16970041 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219288.1
CGCTCAATAAAGTTattaggttttgaataaatATGGCGGCATGTAGGTTACGGTGGACAACGAGATGTCTTTTCAGATTTACATCCGAAAGGATAAGTTTGTTGAGCGGagtttggggtgaactgttTAAGGCTGTCAGAGGACATACAACTTTGTCAGCACCGTGGGCTGCTCATGGCAGACTCATCAGCCACTATGACAGCCTTGTACGCTCCCGTTCACTGCAAGGGGATGATCAACAAAGAGCAGCACTTCTTCAGTTAGCACAGTTAAACAGAGTGATGACAGACTATACCAACATCCCCATCCTTCTCCCTCAACCTAAAGACTACCCACCTAGTCCACCCACCTCCGAACTAAAGAATAATACAAGTAACGTAAACCTTTGCAGTCCTGAAGACATGTCAATTGAAAAAGAAGACAACACACAAGAGGGGTTTCCAAAGCCACGTCCTCCCCTCGGATGCTATATCCATGGCAATGTTGGCACTGGAAAAACAATGCTGATGGATCTTTTTTACTCATTTGTGGAAAACCGAAGAAAAAGGAGGGTTCATTTCAATGCATTCATGTTAGACGTACACAGAAGGATCTACAAACTGAAACAGAGCCTGCCAAAACGACGGATTGGTAAAATGACAATGTATGACCCCATCTTTCCGGTTGCCATGGAGATCGCAGAGGAAACCTGTCTCCTATGCTTTGTCGAGTTTCAGgtgGTGGATATATGCAACGCTGTCATTCTGAAGCAGTTATTTGAGGGTTTGTTCAAGTGTGGGGTTGTGGTTGTGGCAACCTCAAATCGACCACCTGAAGAACTGTACAAAAACGGGCTTCAGAGGGCTGCTTTTGTGCCTTTCATTGGCGTACTCAAGAGGTTTGATACGCTGTGGTTCCACGCAGTCATAAAAGAGCACTGTCATATCGTCAGTCTTGACACAGGAATAGATTACCGGACAAGAGAAATGGATGCAGCAGGAAAACTATACTACATATCAAGTGAGCCTGATGCAGAGAATGCTGTCAATACACTGTTTGAGCAACTGGCGTACAGACAAAATGATGTAATTAGACCAAGAGTGCTGAACGTGCAAGGAAGAGAAGTAACCATGAGCAGAACCTGTGGAACCATTGCAGACTGCGCCTTCCAAGAGCTGTGTGAGCGACCACTGGGTGCAGGTGATTATTTAGAAATCGCTCGGCAGTTCGACACGGTCATTATACGGAATGTTCCTCACTTTCGAGTCGGAATGAAGGACCAGGCTAGACGCTTCACCACACTCATTGACAACTTTTATGACCAAAAGGTTAGAGTGGTGATATTGGCTGATGCCCCGTTACACCGCCTCCTTAATCAGGGGCCGATGACTGGAGAGGAAGCAAGAGATCGCCTGATGATAGATGAACTGGGCCTGACCGATGAAGCCAGTGAGAGGCTGGCACTGTTCACAGCAGACGAAGAGGTCTTCGCCTTCCAGAGGACGGTATCTCGCCTCACAGAGATGCAGACAGAACAGTACTGGCTAAGTGGAGATCGGAGCGTGAACTGAAACCCCCATGCAGCCGACTACCTCTTAATAGAGAGAATAGGAGAGTCTTTGTGGCCCCCCCAAAACATTTGGGAGGGTGCATTTCCATCAGTAAAAACCGCCTGTAAGCCTTatcttgttcatttaaaagcaagTGGAATCGTCCATGTGCTCACatcactaaaactaaattatcaGGGACCGCAGGCCAATGCATGTGATGATAAGATGATGTCTAGCACCCTCTAGTGGATCATGTATTCTGTTGGATTTAGTACATTATgacctttttaaatacactctTACTGTGGGagagggaaaaatatatttatatttaaatgtttgatgtgAATTTATAGTTATTCTTACTTGaatataaaagcatatttaagtaataataaatgagataaaagttaaaataataaattgtatctACAATAAATTGTAactaattatgagataaataaaataataaataaatttac
>XM_043219289.1
CGCTCAATAAAGTTattaggttttgaataaatATGGCGGCATGTAGGTTACGGTGGACAACGAGATGTCTTTTCAGATTTACATCCGAAAGGATAAGTTTGTTGAGCGGagtttggggtgaactgttTAAGGCTGTCAGAGGACATACAACTTTGTCAGCACCGTGGGCTGCTCATGGCAGACTCATCAGCCACTATGACAGCCTTGTACGCTCCCGTTCACTGCAAGGGGATGATCAACAAAGAGCAGCACTTCTTCAGTTAGCACAGTTAAACAGAGTGATGACAGACTATACCAACATCCCCATCCTTCTCCCTCAACCTAAAGACTACCCACCTAGTCCACCCACCTCCGAACTAAAGAATAATACAAGTAACGTAAACCTTTGCAGTCCTGAAGACATGTCAATTGAAAAAGAAGACAACACACAAGAGGGGTTTCCAAAGCCACGTCCTCCCCTCGGATGCTATATCCATGGCAATGTTGGCACTGGAAAAACAATGCTGATGGATCTTTTTTACTCATTTGTGGAAAACCGAAGAAAAAGGAGGGTTCATTTCAATGCATTCATGTTAGACGTACACAGAAGGATCTACAAACTGAAACAGAGCCTGCCAAAACGACGGATTGGTAAAATGACAATGTATGACCCCATCTTTCCGGTTGCCATGGAGATCGCAGAGGAAACCTGTCTCCTATGCTTTGTCGAGTTTCAGgtgGTGGATATATGCAACGCTGTCATTCTGAAGCAGTTATTTGAGGGTTTGTTCAAGTGTGGGGTTGTGGTTGTGGCAACCTCAAATCGACCACCTGAAGAACTGTACAAAAACGGGCTTCAGAGGGCTGCTTTTGTGCCTTTCATTGGCGTACTCAAGGAGCACTGTCATATCGTCAGTCTTGACACAGGAATAGATTACCGGACAAGAGAAATGGATGCAGCAGGAAAACTATACTACATATCAAGTGAGCCTGATGCAGAGAATGCTGTCAATACACTGTTTGAGCAACTGGCGTACAGACAAAATGATGTAATTAGACCAAGAGTGCTGAACGTGCAAGGAAGAGAAGTAACCATGAGCAGAACCTGTGGAACCATTGCAGACTGCGCCTTCCAAGAGCTGTGTGAGCGACCACTGGGTGCAGGTGATTATTTAGAAATCGCTCGGCAGTTCGACACGGTCATTATACGGAATGTTCCTCACTTTCGAGTCGGAATGAAGGACCAGGCTAGACGCTTCACCACACTCATTGACAACTTTTATGACCAAAAGGTTAGAGTGGTGATATTGGCTGATGCCCCGTTACACCGCCTCCTTAATCAGGGGCCGATGACTGGAGAGGAAGCAAGAGATCGCCTGATGATAGATGAACTGGGCCTGACCGATGAAGCCAGTGAGAGGCTGGCACTGTTCACAGCAGACGAAGAGGTCTTCGCCTTCCAGAGGACGGTATCTCGCCTCACAGAGATGCAGACAGAACAGTACTGGCTAAGTGGAGATCGGAGCGTGAACTGAAACCCCCATGCAGCCGACTACCTCTTAATAGAGAGAATAGGAGAGTCTTTGTGGCCCCCCCAAAACATTTGGGAGGGTGCATTTCCATCAGTAAAAACCGCCTGTAAGCCTTatcttgttcatttaaaagcaagTGGAATCGTCCATGTGCTCACatcactaaaactaaattatcaGGGACCGCAGGCCAATGCATGTGATGATAAGATGATGTCTAGCACCCTCTAGTGGATCATGTATTCTGTTGGATTTAGTACATTATgacctttttaaatacactctTACTGTGGGagagggaaaaatatatttatatttaaatgtttgatgtgAATTTATAGTTATTCTTACTTGaatataaaagcatatttaagtaataataaatgagataaaagttaaaataataaattgtatctACAATAAATTGTAactaattatgagataaataaaataataaataaatttac
>XM_043219290.1
CGCTCAATAAAGTTattaggttttgaataaatATGGCGGCATGTAGGTTACGGTGGACAACGAGATGTCTTTTCAGATTTACATCCGAAAGGATAAGTTTGTTGAGCGGagtttggggtgaactgttTAAGGCTGTCAGAGGACATACAACTTTGTCAGCACCGTGGGCTGCTCATGGCAGACTCATCAGCCACTATGACAGCCTTGTACGCTCCCGTTCACTGCAAGGGGATGATCAACAAAGAGCAGCACTTCTTCAGTTAGCACAGTTAAACAGAGTGATGACAGACTATACCAACATCCCCATCCTTCTCCCTCAACCTAAAGACTACCCACCTAGTCCACCCACCTCCGAACTAAAGAATAATACAAGTAACGTAAACCTTTGCAGTCCTGAAGACATGTCAATTGAAAAAGAAGACAACACACAAGAGGGGTTTCCAAAGCCACGTCCTCCCCTCGGATGCTATATCCATGGCAATGTTGGCACTGGAAAAACAATGCTGATGGATCTTTTTTACTCATTTGTGGAAAACCGAAGAAAAAGGAGGGTTCATTTCAATGCATTCATGTTAGACGTACACAGAAGGATCTACAAACTGAAACAGAGCCTGCCAAAACGACGGATTGGTAAAATGACAATGTATGACCCCATCTTTCCGGTTGCCATGGAGATCGCAGAGGAAACCTGTCTCCTATGCTTTGTCGAGTTTCAGgtgGTGGATATATGCAACGCTGTCATTCTGAAGCAGTTATTTGAGGGTTTGTTCAAGTGTGGGGTTGTGGTTGTGGCAACCTCAAATCGACCACCTGAAGAACTGTACAAAAACGGGCTTCAGAGGGCTGCTTTTGTGCCTTTCATTGGCGTACTCAAGCCACTGGGTGCAGGTGATTATTTAGAAATCGCTCGGCAGTTCGACACGGTCATTATACGGAATGTTCCTCACTTTCGAGTCGGAATGAAGGACCAGGCTAGACGCTTCACCACACTCATTGACAACTTTTATGACCAAAAGGTTAGAGTGGTGATATTGGCTGATGCCCCGTTACACCGCCTCCTTAATCAGGGGCCGATGACTGGAGAGGAAGCAAGAGATCGCCTGATGATAGATGAACTGGGCCTGACCGATGAAGCCAGTGAGAGGCTGGCACTGTTCACAGCAGACGAAGAGGTCTTCGCCTTCCAGAGGACGGTATCTCGCCTCACAGAGATGCAGACAGAACAGTACTGGCTAAGTGGAGATCGGAGCGTGAACTGAAACCCCCATGCAGCCGACTACCTCTTAATAGAGAGAATAGGAGAGTCTTTGTGGCCCCCCCAAAACATTTGGGAGGGTGCATTTCCATCAGTAAAAACCGCCTGTAAGCCTTatcttgttcatttaaaagcaagTGGAATCGTCCATGTGCTCACatcactaaaactaaattatcaGGGACCGCAGGCCAATGCATGTGATGATAAGATGATGTCTAGCACCCTCTAGTGGATCATGTATTCTGTTGGATTTAGTACATTATgacctttttaaatacactctTACTGTGGGagagggaaaaatatatttatatttaaatgtttgatgtgAATTTATAGTTATTCTTACTTGaatataaaagcatatttaagtaataataaatgagataaaagttaaaataataaattgtatctACAATAAATTGTAactaattatgagataaataaaataataaataaatttac

Function

NR:

description
lactation elevated protein 1 homolog B-like

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219288.1 True 2014 mRNA 0.43 14 16949429 16970041
XM_043219289.1 False 1978 mRNA 0.43 13 16949429 16970041
XM_043219290.1 False 1723 mRNA 0.43 10 16949429 16970041

Neighbor

gene id symbol gene type direction distance location
foxo3b foxo3b,LOC107679488,LOC107601202,LOC107726619,LOC107601425,LOC107726429,LOC107696126 coding downstream 2251 16921638 ~ 16947178 (-)
armc2 armc2,LOC107679492,LOC107601205,LOC107696124,LOC107726616,LOC107726428,LOC107601411 coding downstream 37497 16896561 ~ 16911932 (-)
cep57l1 LOC107679495,LOC107726623,LOC107601208,LOC107696099,LOC107726414 coding downstream 90819 16855295 ~ 16858610 (-)
grm1a grm1,grm1a,LOC107679500,LOC107696122,LOC107726479 coding downstream 109367 16814705 ~ 16840062 (-)
rab32a rab32,rab32a,LOC107679502,LOC107601480,LOC107696121,LOC107726484 coding downstream 135285 16799760 ~ 16814144 (-)
nr2e1 nr2e1,LOC107602776,LOC107726424,LOC107726614,LOC107601200 coding upstream 14303 16984344 ~ 16991803 (-)
nbas nbas,LOC107602494,LOC108439588 coding upstream 182302 17152343 ~ 17286892 (-)
smek1 smek1,ppp4r3a,LOC107726626,LOC107555622,LOC107696138,LOC107698404,LOC107601285,LOC107726461 coding upstream 444426 17414467 ~ 17424811 (-)
paplnb LOC107698340,LOC107555612 coding upstream 458465 17428506 ~ 17440011 (-)
LOC122325537 LOC107698338,LOC107555613,LOC107726610 coding upstream 483001 17453042 ~ 17455437 (-)
G139145 NA non-coding downstream 2889 16850554 ~ 16946540 (-)
G139149 NA non-coding downstream 53046 16860326 ~ 16896383 (-)
G139148 sesn1,LOC107726430,LOC107601436 non-coding downstream 57969 16889939 ~ 16891460 (-)
G139147 sesn1,LOC107601204,LOC107679493,LOC107601436,LOC107696127,LOC107726620 non-coding downstream 89173 16859343 ~ 16860256 (-)
G139139 NA non-coding downstream 104261 16843218 ~ 16845168 (-)
LOC122325296 NA non-coding upstream 73606 17043647 ~ 17116946 (-)
G139300 NA non-coding upstream 153845 17123886 ~ 17124259 (-)
G139301 NA non-coding upstream 154782 17124823 ~ 17125248 (-)
G139302 NA non-coding upstream 155396 17125437 ~ 17125910 (-)
G139317 NA non-coding upstream 365966 17336007 ~ 17336320 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 487213 16455468 ~ 16462216 (-)
fndc1 fndc1,LOC107693219,LOC107732645,LOC107549078,LOC107726397,LOC107696111 other downstream 582630 16347201 ~ 16366799 (-)
LOC122324507 sash1,sash1a,LOC107732642,LOC107601490,LOC107693212,LOC107696119 other downstream 844702 16017318 ~ 16104727 (-)
LOC122325494 LOC107693148,LOC107734075,LOC107594136,LOC107710410,LOC107653994,LOC107552018 other downstream 955784 15990149 ~ 15993645 (-)
LOC122325613 NA other downstream 1104855 15844354 ~ 15844574 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other upstream 376765 17346806 ~ 17428123 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other upstream 831361 17801402 ~ 17824201 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other upstream 1373422 18343463 ~ 18350122 (-)
G139706 LOC107683600,LOC107601464 other upstream 1435986 18406027 ~ 18446949 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 2284693 19254734 ~ 19256272 (-)

Expression


Co-expression Network