LOC122324696 (slc25a45,LOC107662097,LOC107702892,LOC107722745)


Basic Information

Item Value
gene id LOC122324696
gene name slc25a45,LOC107662097,LOC107702892,LOC107722745
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26919055 ~ 26926040 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219306.1
CTTTTCTCCAGCAAATCAAATTTTCAGTGAGGCAAAATATCAGGCACAGTAACAATTTCTCTTTGTAAAACAGTACGAATGGCTCTATTATTACTAATTTCTAAAAATCAAAGTTCCCCAACATAAGCTAGAGTAGCATTTCAAGACATGATAAGCATGATAAATATCTGACAAGGTACATTATCACCAGCAGATGGTAGTAGAGCAGATCTTTGAGACCAAACATACTCTTAAAACCCCCTCTTTCTCTATTTACTTTTTAGCAACAGTAagtttaatccaaaaatgcaaaatcgTTTTGTTGTTAAAAGGCCAGAGTCGTTGCAGTTTCTCTCGTGACAGTTCAGTTTATCGAAGCAAGATGATTTCTGCCCAAAGAGGACATCCTGCTTCGTCGTTAATTCCGAGTTTTTGCTTGAAAAATATTGTATAGAGTCGACTTTTCTATATGTGGTTTGCCGAGGTTCATGTATCAGTGCGCTGCGTCTGAACTTTGGTAACGTTAGCCGGCTAATTCGATAGTTTCTTACTGCACGCATAAAACACCTCGGACTAACTAAAGAagagtttgtttttatcattggTTTATTTAATGAAAGTGCCATGCCGTTTGTCGAGTTCGTCGCAGGATGGATTTCAGGTGCTGTTGGTTTAGTTGTTGGACACCCTTTGGACACAGTAAAGGTGCGCTTGCAGACCCAGGCTGTATATAGAGGAATATTTGATTGTGTGGTCAAAACATATACACATGAAGGATTCCGTGGATTTTTTAAAGGCATGTCATTTCCGGTCGTCTCCGTTGCTGTCAGCAATGCTGTGGCCTTTGGTTCATACAGTAATGCGCTGGATTACCTTACTCGGTCAGGTCACAGCTCCTCTGACCAAAGCAAGCAGTCGTCGCTCACTGCCGTGTTCACGGCCGGCTGTTTTTCAGGGTTAGCGCAGTTGTTTGTTACAGCTCCGATAGACCTGGTTAAAGTGCGTCTGCAGAACCAGACGAAGTCAGGTGGGAATAAATACAGAGGTCCCATACATTGCATCGCTGTGATCTTAAGAGAGGACGGGGTGAAAGGCCTTTTCAGAGGGATCTGGGCTCTTGCTCTGCGCGACGTGCCATGTTTTGGAGTTTACTTCCTGCCGTACGAGCTGATCTGCAGGATGCTGACTGAGAAAGGGAAGCAACCAGGTAACACTGCTGTGCTGGTGGCTGGTGGCGTTGCTGGTGTGGTCACATGGGCCTGTGCCACCCCCATGGATGTGGTGAAGGCTCGACTGCAGATGTGTGGCGGCGGCGGTCGCATGTACAGCGGTGTGCTGAACTGCATTACTGTAAGCGTGCGTGAGGAGGGCATGCGGGTTTTCTTCAAAGGCCTTCTTCTGAACAGCGTGAGAGCGTTCCCTGTGAACGCTGTAACCTTCCTCAGCTACGAGATGCTGCTGAGAGCCATGACCGACTCCTCCCAGAACTGAGGGGTTGGCCGcaggatgatgatgatttttGCAAGCCAAAATGAGTtcacaaattagcattttcaatcAGTTCCATCattctttcctcttttttttgttaaatggcTGAAATAAGGTCTGTGGTGAACACAAGCTATCTTCACAGTTTATTCTAGGCCGTAAAATACATCAGTAGTCGTTTCCATCCACAGAATGTGAACACTTGTGCTCAAAACTggaatattgtataaaataagaGAACCACcgaatataataattttcatttatgatgAATTACTTGCGCCTCAAAGCGAGCACACGAAATGCCATAAATGCGGTCATTGCTTTCAGACGTGGATGTCTAATGTTTGGGAACAaggttgtgtaaaaaaaaaaaaaaaaaaaaaaaaattgatgattGATTTACTCAGACTTTAGTGACAAAATCAACATTTCAATCTGAAGGTCAGTGATGGTAACACGTTTGTAGTTCATTTATAGCCTGCGTTTGTATATATAGCTTCAAGGCTTTCAAATTTATAGACTGAAGAAGCCTTCGTTGGCTACAGATCTTACAATATTTTTTGCAGTAATCCAAAAGCCAATGGGAAAATCCTACAGATTCAGAATGATGCGAACTGATGAGTCGGCCTGCAAAAACTCCGTTAGTACCTATAAATAAGCTCTGTGCCGATTTTGATACGTCCAGTGACTGGAATAGGAGtcttttcttcatgttttgCACACCGATTCTCTTGGTGACTGTTTCCGTAGGCTGCATTATTCATTACGCTAAAAGCTAGCGACCAGACGGTGTCgtatttttattagttgtaGCAACATAGCCCTTTTACTGACGCTCAGCAAAATCCTGCCATTTCATGAGCGATCCACACCATCGTAAGTTTAAACGTGGGAGGAAAAGAGGATCATATTATGGCTTTCAAACGATATTAacatgctgggatatttgaaaacggatgcttttgaacgttagcgtCACTcacatccagcttcatatctgtggGTTTTAATAGACGGAAGGTTTGTTcggtaacaaaaaaaaaaaaaaaaaaaaaagtaacgaCACGGTTGTATCGACAAATGCATTTCTATAGGagttttgttaacactatctggAAAGTTTAGGGTTGGATGTGgagtagggcatatttccaacattatGGAGCATTATAATGTGCCGcggtattgaacctgtgttttagcgtcactcagtggacatttctctttgaaactgcacgtaaaaacagtgttgcacaaaaagtgcgcagaggtacatatttttatgagagcaGGTTGTTTAATGTTCTTTATAagccttttatgtttttatgctcACCCATGCTGCAtctatttgatcagaaatacagtaaaaactgtaacactgttaaagttttacagtttataaCCGTTTCTGTAAATGCTGTGTTCTGAAAAGGTGATTTTTCACTGTCATGTGTcgttctaatatactgatttgctgctcaagaaacatttctgattgttAACAAGTTGCGCTACGCTGTATATGCCGCCATTCATATATTTGAGGTCAGAAATGAATACTATTTAGCaagtttataatgttacaaatgcattttagaatAGTTTCTCAAGGATCACGTGACATTGAACATTAGTCCTAAAtcctgtttatatttttgttgagaagttaatgtgttttaacaaaaatacaaactgCACACTTATAAATTTATACCCCAGGAATACTTTTGACTTGCGTTGTAAAGAATATTTTCATGTCtgttcaactttttttattattccaaaTAGATCAGAACCTAGAACATTACGTAACATACATAAAGCGTTATGAATCACCTGCCTGGTTATTGTTACTAAGTTACTACAGGAGCCGGTTTCAACCACAGGAAGATACCGCTGTCATTAGTTTGACGATTATACTATATTGATTCTATGTTAAACACACTATTGCATCTAAATGTGCAGGTAACTAAGTAAAGCATTTATAGATTCAGG
>XM_043219307.1
CTTTTCTCCAGCAAATCAAATTTTCAGTGAGGCAAAATATCAGGCACAGTAACAATTTCTCTTTGTAAAACAGTACGAATGGCTCTATTATTACTAATTTCTAAAAATCAAAGTTCCCCAACATAAGCTAGAGTAGCATTTCAAGACATGATAAGCATGATAAATATCTGACAAGGTACATTATCACCAGCAGATGGTAGTAGAGCAGATCTTTGAGACCAAACATACTCTTAAAACCCCCTCTTTCTCTATTTACTTTTTAGCAACAGTAagtttaatccaaaaatgcaaaatcgTTTTGTTGTTAAAAGGCCAGAGTCGTTGCAGTTTCTCTCGTGACAGTTCAGTTTATCGAAGCAAGATGATTTCTGCCCAAAGAGGACATCCTGCTTCGTCGTTAATTCCGAGTTTTTGCTTGAAAAATATTGTATAGAGTCGACTTTTCTATATGTGGTTTGCCGAGGTTCATGTATCAGTGCGCTGCGTCTGAACTTTGGTAACGTTAGCCGGCTAATTCGATAGTTTCTTACTGCACGCATAAAACACCTCGGACTAACTAAAGAagagtttgtttttatcattggTTTATTTAATGAAAGTGCCATGCCGTTTGTCGAGTTCGTCGCAGGATGGATTTCAGacTGCAAACTGTTCAATGATTAACAAATGGTTAATCATGTGTGGTGTCAGGTGCTGTTGGTTTAGTTGTTGGACACCCTTTGGACACAGTAAAGGTGCGCTTGCAGACCCAGGCTGTATATAGAGGAATATTTGATTGTGTGGTCAAAACATATACACATGAAGGATTCCGTGGATTTTTTAAAGGCATGTCATTTCCGGTCGTCTCCGTTGCTGTCAGCAATGCTGTGGCCTTTGGTTCATACAGTAATGCGCTGGATTACCTTACTCGGTCAGGTCACAGCTCCTCTGACCAAAGCAAGCAGTCGTCGCTCACTGCCGTGTTCACGGCCGGCTGTTTTTCAGGGTTAGCGCAGTTGTTTGTTACAGCTCCGATAGACCTGGTTAAAGTGCGTCTGCAGAACCAGACGAAGTCAGGTGGGAATAAATACAGAGGTCCCATACATTGCATCGCTGTGATCTTAAGAGAGGACGGGGTGAAAGGCCTTTTCAGAGGGATCTGGGCTCTTGCTCTGCGCGACGTGCCATGTTTTGGAGTTTACTTCCTGCCGTACGAGCTGATCTGCAGGATGCTGACTGAGAAAGGGAAGCAACCAGGTAACACTGCTGTGCTGGTGGCTGGTGGCGTTGCTGGTGTGGTCACATGGGCCTGTGCCACCCCCATGGATGTGGTGAAGGCTCGACTGCAGATGTGTGGCGGCGGCGGTCGCATGTACAGCGGTGTGCTGAACTGCATTACTGTAAGCGTGCGTGAGGAGGGCATGCGGGTTTTCTTCAAAGGCCTTCTTCTGAACAGCGTGAGAGCGTTCCCTGTGAACGCTGTAACCTTCCTCAGCTACGAGATGCTGCTGAGAGCCATGACCGACTCCTCCCAGAACTGAGGGGTTGGCCGcaggatgatgatgatttttGCAAGCCAAAATGAGTtcacaaattagcattttcaatcAGTTCCATCattctttcctcttttttttgttaaatggcTGAAATAAGGTCTGTGGTGAACACAAGCTATCTTCACAGTTTATTCTAGGCCGTAAAATACATCAGTAGTCGTTTCCATCCACAGAATGTGAACACTTGTGCTCAAAACTggaatattgtataaaataagaGAACCACcgaatataataattttcatttatgatgAATTACTTGCGCCTCAAAGCGAGCACACGAAATGCCATAAATGCGGTCATTGCTTTCAGACGTGGATGTCTAATGTTTGGGAACAaggttgtgtaaaaaaaaaaaaaaaaaaaaaaaaattgatgattGATTTACTCAGACTTTAGTGACAAAATCAACATTTCAATCTGAAGGTCAGTGATGGTAACACGTTTGTAGTTCATTTATAGCCTGCGTTTGTATATATAGCTTCAAGGCTTTCAAATTTATAGACTGAAGAAGCCTTCGTTGGCTACAGATCTTACAATATTTTTTGCAGTAATCCAAAAGCCAATGGGAAAATCCTACAGATTCAGAATGATGCGAACTGATGAGTCGGCCTGCAAAAACTCCGTTAGTACCTATAAATAAGCTCTGTGCCGATTTTGATACGTCCAGTGACTGGAATAGGAGtcttttcttcatgttttgCACACCGATTCTCTTGGTGACTGTTTCCGTAGGCTGCATTATTCATTACGCTAAAAGCTAGCGACCAGACGGTGTCgtatttttattagttgtaGCAACATAGCCCTTTTACTGACGCTCAGCAAAATCCTGCCATTTCATGAGCGATCCACACCATCGTAAGTTTAAACGTGGGAGGAAAAGAGGATCATATTATGGCTTTCAAACGATATTAacatgctgggatatttgaaaacggatgcttttgaacgttagcgtCACTcacatccagcttcatatctgtggGTTTTAATAGACGGAAGGTTTGTTcggtaacaaaaaaaaaaaaaaaaaaaaaagtaacgaCACGGTTGTATCGACAAATGCATTTCTATAGGagttttgttaacactatctggAAAGTTTAGGGTTGGATGTGgagtagggcatatttccaacattatGGAGCATTATAATGTGCCGcggtattgaacctgtgttttagcgtcactcagtggacatttctctttgaaactgcacgtaaaaacagtgttgcacaaaaagtgcgcagaggtacatatttttatgagagcaGGTTGTTTAATGTTCTTTATAagccttttatgtttttatgctcACCCATGCTGCAtctatttgatcagaaatacagtaaaaactgtaacactgttaaagttttacagtttataaCCGTTTCTGTAAATGCTGTGTTCTGAAAAGGTGATTTTTCACTGTCATGTGTcgttctaatatactgatttgctgctcaagaaacatttctgattgttAACAAGTTGCGCTACGCTGTATATGCCGCCATTCATATATTTGAGGTCAGAAATGAATACTATTTAGCaagtttataatgttacaaatgcattttagaatAGTTTCTCAAGGATCACGTGACATTGAACATTAGTCCTAAAtcctgtttatatttttgttgagaagttaatgtgttttaacaaaaatacaaactgCACACTTATAAATTTATACCCCAGGAATACTTTTGACTTGCGTTGTAAAGAATATTTTCATGTCtgttcaactttttttattattccaaaTAGATCAGAACCTAGAACATTACGTAACATACATAAAGCGTTATGAATCACCTGCCTGGTTATTGTTACTAAGTTACTACAGGAGCCGGTTTCAACCACAGGAAGATACCGCTGTCATTAGTTTGACGATTATACTATATTGATTCTATGTTAAACACACTATTGCATCTAAATGTGCAGGTAACTAAGTAAAGCATTTATAGATTCAGG

Function

symbol description
slc25a45 Predicted to enable acyl carnitine transmembrane transporter activity. Predicted to be involved in acyl carnitine transport and amino acid transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane.

NR:

description
PREDICTED: solute carrier family 25 member 45

GO: NA

KEGG:

id description
K15123 SLC25A45_47; solute carrier family 25, member 45/47

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219306.1 False 3471 mRNA 0.40 6 26919055 26926040
XM_043219307.1 True 3521 mRNA 0.40 6 26919055 26926040

Neighbor

gene id symbol gene type direction distance location
LOC122324339 LOC107548517,LOC107662059 coding upstream 193893 26720498 ~ 26725162 (+)
mgat2 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding upstream 353351 26563656 ~ 26565704 (+)
trnas-gcu_31 NA coding upstream 361291 26557683 ~ 26557764 (+)
faua fau,LOC107557010,LOC107567395,LOC107659798,LOC107717644,LOC107704371,LOC105017549 coding upstream 684837 26230786 ~ 26234218 (+)
prpf39 prpf39,LOC107704382,LOC107659803,LOC107713858,LOC107567385 coding upstream 689310 26218579 ~ 26229745 (+)
LOC122325624 NA coding downstream 14946 26940986 ~ 26941120 (+)
her1 LOC107740037,LOC107662100,LOC107556024,LOC107722755,LOC107548498 coding downstream 28745 26954785 ~ 26956511 (+)
mepcea LOC107739998,LOC107662061,LOC107722754,LOC107548516 coding downstream 32252 26958292 ~ 26968451 (+)
ephb4a ephb4a,LOC107739999,LOC107662063,LOC107702956 coding downstream 176126 27102166 ~ 27138443 (+)
kif1c kif1c,LOC107740001,LOC107560345,LOC107702955 coding downstream 267827 27193867 ~ 27225408 (+)
G142418 NA non-coding upstream 6468 26912186 ~ 26912587 (+)
G142396 NA non-coding upstream 62738 26816759 ~ 26856317 (+)
G142395 NA non-coding upstream 66159 26785260 ~ 26852896 (+)
LOC122325407 NA non-coding upstream 79797 26837927 ~ 26839258 (+)
LOC122324288 NA non-coding upstream 92555 26825671 ~ 26826500 (+)
G142434 NA non-coding downstream 14782 26940822 ~ 26941519 (+)
G142490 NA non-coding downstream 220528 27146568 ~ 27146955 (+)
G142494 NA non-coding downstream 271892 27197932 ~ 27234786 (+)
G142551 NA non-coding downstream 476411 27402451 ~ 27402826 (+)
G142561 NA non-coding downstream 521143 27447183 ~ 27447461 (+)
G142416 NA other upstream 13898 26903247 ~ 26905157 (+)
G142333 LOC102197881 other upstream 439854 26478551 ~ 26479201 (+)
G142173 NA other upstream 661821 26235421 ~ 26257234 (+)
G142123 LOC107756040,LOC107704367,LOC107712211,LOC107564320,LOC107659815,LOC108257655,LOC108411613 other upstream 879847 25916034 ~ 26039208 (+)
LOC122325079 dlg4,LOC107556052,LOC107662062,LOC106563427,LOC106603100 other downstream 46205 26972245 ~ 27093757 (+)

Expression


Co-expression Network