eif2b4 (eif2b4,LOC107723173,LOC107589057,LOC107697314,LOC107701499,LOC107561932)


Basic Information

Item Value
gene id eif2b4
gene name eif2b4,LOC107723173,LOC107589057,LOC107697314,LOC107701499,LOC107561932
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 10925463 ~ 10932315 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219453.1
GCGTAATTCATCCCGACCGCTTTTTCCGCGTCAGTTTACCAGCGCGAAGTCACGAAGAAATGAAACATGGCGGACTCGGACGGGAGACAGGTTGACAGCATCAACCACGCTACAGGGGAAGATGTAAAGTTGCAAGATATTGTGCGGGCGAAGAATGAGGGCAAGGAACTGACCAAAGAAGAAAAGCAGCGTCTTAGAAAAGAGAAGAAGCAgcataaaaagaataaaaaggaTGACAAGGGTCCTTcggagaaggagaaggagaaagagaaggagaaggagaaagcATCAGTACCAGCTTTATCAAAACCTGCCACACACAGCCCAGCACATAAAGTGGCTCCTGCCCCTGTGAACGCGTCCGCGTCTGAATCGTCTGCGGCTGCAGAGAAGCCAGCCAAGAGCAAAGCGGAGATGAGAGCAGAGCGCCGGGCACGGCAAGACTCGGAGCGAGCGTCGAAACAGGGCAAGAAAGAAGGGGGGCAGCAGTCCGCCTCCAGCAAGCCTAAAGCTACCCCCAGTGAGCTTCAGCCAGTAGTGAAAAGGTTGCCGGAGCACGTTCAGGTGGACGACCCTGCTGCTTTGAAGAAGTTGGCCAAAAAGCTTGAGAGGCAGCAGAAGTCAGGGCAGGAATGCGGTTTAAATGTAACTGGAGTCAAGGTTCCTTTAAGGTCCGATTATGGATACAAGGTCAGCCTGTTCTCACATCTACACCAATATAGCCGGAAACACCCTCCCACCCAGCAGATCAGCATCCCTGCCACAGTTATTCACCCATCCATTGTTCGGTTGGGCCTGCAGTACTCTCAGGGCATTATAGCAGGATCCAATGCTCGATCTGTGGCCCTACTCCATGCCTTTAAACAggtTATTCAAGACTACAGCACACCTCCGAATGAGGAGTTGTCAAGGGACCTTGTGAACAAGCTGTCACCCTATATCAGTTTTCTCAGCCAGTGCCGACCCCTTTCAGCCAGCATGGGCAATGCCATCAAATACATCAAGAAGGAAATCTCAAATATACCGAGTCAATGCAAAGAAGAAGAGGCCAAAGGGAAACTGCAGGAATGCATCGATAGTTACATAAATGAGAAGATCATTTTGGCTTCTGAAGCCATCTCTAAGTATGCTATCGAGAAGATAAGTAACGGAGACGTCATTCTTGTTTATGGCTGCTCTTCGCTTGTCAACCACATTCTGTGCGAAGCTTTCGAAAAGCAGAGGAAGTTCAGAGTCATAGTTGTGGACAGTCGGCCCAGACTGGAGGGCAGAGAGGCGCTGAGGCGTCTGGTGAAGAAAGGCATCCGATGTACTTATGTGCTCATATCTGCCTTGTCCTACATTCTGCCTGAAGTATCCAAGGTATTTCTTGGTGCCCATGCACTCCTTGCTAATGGATACGTGATGTCACGTGTGGGAACTTCCCAAATTGCCCTGGTAGCAAAGGCCTACAACGTACCAGTGCTGGTCTGCTGTGAGACCTACAAGTTCTGTGAACGAGTGCAGACTGACTCTTTTGTATCCAACGAATTAGatgacCCCGATGACCTGATAGTGACCAGAAATGGGAAGACCCACCTAGAGAACTGGCAGACTGTTAAATCACTGGGGCTTCTGAACCTGGTATATGACGTGACCCCACCAGACTTTGTGGATCTTGTCATCACTGACTTGGGCATGATCCCCTGCACCTCCGTGCCTGTGGTACTGCGAGTCAAGAACGTAGATCAGTGAAGAGCCAACCAGGTTCTGCTTCCCTCTTGCATCTGCACATAAGATTTTGTGCACACAAGTTTCTGGCACCCCATAAACATGTCTATGAAATGGATCAAGCTTTTCAAATAAAGCTAGTTTATGTCCTCACTAGTGGGAtccatttaatttcaaactGTATCACTGGTTCAATTCCAGTTTCTAAAAAAGTCCACCTAAAGAGAATTAGCACTTGTTGTACACAAGATAACATTCAAGGTAGCTTTGTTTTTGCGTCAGATCCACCAAATTCAAGAAAGTGTCTGTAAATGCTAACGTTTTGGCCCACCGCAGTGGTCAGTGCATGGACATAAATGCAAGAAACATCTATTGTCCTTTTTTGGGTAGTTACTGTTGCTGAAGTCCTTTCAtagatgtggaaaaaaaaaagggaaaagaacACGGTGCAAATGTGTGTAAGATCATGCAAAAGCTGAATGTGTTGCATAAGAGGTTTTGTTTGTATTACCAAAACCTTGGAAACgctacagaaaaaataaattgtttagttaaaaaaaaaaaaaa
>XM_043219454.1
GCGTAATTCATCCCGACCGCTTTTTCCGCGTCAGTTTACCAGCGCGAAGTCACGAAGAAATGAAACATGGCGGACTCGGACGGGAGACAGGTTGACAGCATCAACCACGCTACAGGGGAAGATGTAAAGTTGCAAGATATTGTGCGGGCGAAGAATGAGGGCAAGGAACTGACCAAAGAAGAAAAGCAGCGTCTTAGAAAAGAGAAGAAGCAgcataaaaagaataaaaaggaTGACAAGGGTCCTTcggagaaggagaaggagaaagagaaggagaaggagaaagcATCAGTACCAGCTTTATCAAAACCTGCCACACACAGCCCAGCACATAAAGTGGCTCCTGCCCCTGTGAACGCGTCCGCGTCTGAATCGTCTGCGGCTGCAGAGAAGCCAGCCAAGAGCAAAGCGGAGATGAGAGCAGAGCGCCGGGCACGGCAAGACTCGGAGCGAGCGTCGAAACAGGGCAAGAAAGAAGGGGGGCAGCAGTCCGCCTCCAGCAAGCCTAAAGCTACCCCCAGTGAGCTTCAGCCAGTAGTGAAAAGGTTGCCGGAGCACGTTCAGGTGGACGACCCTGCTGCTTTGAAGAAGTTGGCCAAAAAGCTTGAGAGGCAGCAGGTTCCTTTAAGGTCCGATTATGGATACAAGGTCAGCCTGTTCTCACATCTACACCAATATAGCCGGAAACACCCTCCCACCCAGCAGATCAGCATCCCTGCCACAGTTATTCACCCATCCATTGTTCGGTTGGGCCTGCAGTACTCTCAGGGCATTATAGCAGGATCCAATGCTCGATCTGTGGCCCTACTCCATGCCTTTAAACAggtTATTCAAGACTACAGCACACCTCCGAATGAGGAGTTGTCAAGGGACCTTGTGAACAAGCTGTCACCCTATATCAGTTTTCTCAGCCAGTGCCGACCCCTTTCAGCCAGCATGGGCAATGCCATCAAATACATCAAGAAGGAAATCTCAAATATACCGAGTCAATGCAAAGAAGAAGAGGCCAAAGGGAAACTGCAGGAATGCATCGATAGTTACATAAATGAGAAGATCATTTTGGCTTCTGAAGCCATCTCTAAGTATGCTATCGAGAAGATAAGTAACGGAGACGTCATTCTTGTTTATGGCTGCTCTTCGCTTGTCAACCACATTCTGTGCGAAGCTTTCGAAAAGCAGAGGAAGTTCAGAGTCATAGTTGTGGACAGTCGGCCCAGACTGGAGGGCAGAGAGGCGCTGAGGCGTCTGGTGAAGAAAGGCATCCGATGTACTTATGTGCTCATATCTGCCTTGTCCTACATTCTGCCTGAAGTATCCAAGGTATTTCTTGGTGCCCATGCACTCCTTGCTAATGGATACGTGATGTCACGTGTGGGAACTTCCCAAATTGCCCTGGTAGCAAAGGCCTACAACGTACCAGTGCTGGTCTGCTGTGAGACCTACAAGTTCTGTGAACGAGTGCAGACTGACTCTTTTGTATCCAACGAATTAGatgacCCCGATGACCTGATAGTGACCAGAAATGGGAAGACCCACCTAGAGAACTGGCAGACTGTTAAATCACTGGGGCTTCTGAACCTGGTATATGACGTGACCCCACCAGACTTTGTGGATCTTGTCATCACTGACTTGGGCATGATCCCCTGCACCTCCGTGCCTGTGGTACTGCGAGTCAAGAACGTAGATCAGTGAAGAGCCAACCAGGTTCTGCTTCCCTCTTGCATCTGCACATAAGATTTTGTGCACACAAGTTTCTGGCACCCCATAAACATGTCTATGAAATGGATCAAGCTTTTCAAATAAAGCTAGTTTATGTCCTCACTAGTGGGAtccatttaatttcaaactGTATCACTGGTTCAATTCCAGTTTCTAAAAAAGTCCACCTAAAGAGAATTAGCACTTGTTGTACACAAGATAACATTCAAGGTAGCTTTGTTTTTGCGTCAGATCCACCAAATTCAAGAAAGTGTCTGTAAATGCTAACGTTTTGGCCCACCGCAGTGGTCAGTGCATGGACATAAATGCAAGAAACATCTATTGTCCTTTTTTGGGTAGTTACTGTTGCTGAAGTCCTTTCAtagatgtggaaaaaaaaaagggaaaagaacACGGTGCAAATGTGTGTAAGATCATGCAAAAGCTGAATGTGTTGCATAAGAGGTTTTGTTTGTATTACCAAAACCTTGGAAACgctacagaaaaaataaattgtttagttaaaaaaaaaaaaaa

Function

symbol description
eif2b4 Predicted to enable translation initiation factor activity. Predicted to act upstream of or within translational initiation. Human ortholog(s) of this gene implicated in leukoencephalopathy with vanishing white matter. Orthologous to human EIF2B4 (eukaryotic translation initiation factor 2B subunit delta).

NR:

description
PREDICTED: translation initiation factor eIF-2B subunit delta-like

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0045947 negative regulation of translational initiation biological_process
GO:0005851 eukaryotic translation initiation factor 2B complex cellular_component
GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity molecular_function
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03680 EIF2B4; translation initiation factor eIF-2B subunit delta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219453.1 True 2277 mRNA 0.47 14 10925463 10932315
XM_043219454.1 False 2235 mRNA 0.47 13 10925463 10932315

Neighbor

gene id symbol gene type direction distance location
snx17 snx17,LOC107723180,LOC107701503,LOC107746210 coding downstream 2581 10895988 ~ 10922882 (-)
si:ch211-278j3.3 LOC107589055,LOC107723221,LOC107746185,LOC107561935,LOC107701501 coding downstream 37236 10871839 ~ 10888227 (-)
si:dkey-71h2.2 si:dkey-71h2.2,LOC107589054,LOC107697321,LOC107723250,LOC107701504,LOC107746162 coding downstream 54728 10839146 ~ 10870735 (-)
xkr6b xkr6b,LOC107723320,LOC107684793,LOC107589046,LOC107746102,LOC107701509,LOC108258067,LOC105897758,LOC108435015,LOC103023855 coding downstream 226031 10649046 ~ 10699432 (-)
ccm2 ccm2,LOC107589047,LOC107684794,LOC107723330 coding downstream 276815 10638226 ~ 10648648 (-)
trnal-cag_34 NA coding upstream 247 10932562 ~ 10932644 (-)
si:ch211-142k18.1 si:ch211-142k18.1,LOC107723504,LOC107589090,LOC107697312,LOC107746370,LOC107563691,LOC107701470 coding upstream 129599 11061914 ~ 11067406 (-)
kita LOC107755246,LOC107683958,LOC107601906,LOC107718397 coding upstream 368829 11301144 ~ 11319919 (-)
pdgfra pdgfra-2,pdgfra,LOC107683957,LOC107601905,LOC107718396,LOC107597438,LOC107755213,LOC107665286 coding upstream 407548 11339863 ~ 11360039 (-)
fip1l1a fip1l1a,LOC107601903,LOC107665400,LOC107718393,LOC107597463 coding upstream 551822 11484137 ~ 11506327 (-)
G137588 NA non-coding downstream 118683 10806521 ~ 10806780 (-)
G137578 LOC107684790,LOC107723476,LOC107589053 non-coding downstream 139128 10785953 ~ 10786335 (-)
G137573 rp1l1b,LOC107589053,LOC107723476,LOC107684790,LOC107561938,LOC107746156 non-coding downstream 146057 10779130 ~ 10779406 (-)
G137560 NA non-coding downstream 171272 10753957 ~ 10754191 (-)
G137559 NA non-coding downstream 172205 10752847 ~ 10753258 (-)
LOC122325152 NA non-coding upstream 2631 10934946 ~ 10937374 (-)
LOC122325111 NA non-coding upstream 181481 11113796 ~ 11114925 (-)
G137621 LOC107739294,LOC107553647 non-coding upstream 259344 11191659 ~ 11194847 (-)
G137644 NA non-coding upstream 282911 11215226 ~ 11227365 (-)
G137751 NA non-coding upstream 679708 11612023 ~ 11613622 (-)
G137469 tdh,LOC107561940,LOC107723287,LOC107684809,LOC107589050,LOC107701506,LOC107746115 other downstream 201394 10721921 ~ 10724069 (-)
G137451 NA other downstream 354726 10567297 ~ 10570737 (-)
G137330 NA other downstream 986586 9937965 ~ 9938877 (-)
si:dkey-5n18.1 LOC107723560,LOC107687192,LOC107588914 other downstream 1174080 9697662 ~ 9751383 (-)
si:ch73-74h11.1 LOC107687168,LOC107588915 other downstream 1224925 9691124 ~ 9700538 (-)
LOC122324412 nme6,LOC107589089,LOC107697297,LOC107723520 other upstream 199109 11131424 ~ 11136612 (-)
LOC122325476 cdh2,-,cdh4,LOC107561048,LOC107746014,LOC107571545,LOC107701519,LOC107684812,LOC108416271,LOC107656023,LOC107590155,LOC107728629,LOC107739294,LOC107553647 other upstream 209630 11141945 ~ 11182183 (-)
gsx2 gsx2,LOC107601899,LOC107597471,LOC107683998,LOC107755223,LOC107718430 other upstream 434608 11366923 ~ 11368490 (-)
G137773 LOC107755215,LOC107683983,LOC107601925,LOC107718419,LOC107665290,LOC107597464 other upstream 750090 11682405 ~ 11683318 (-)
G137967 mdn1,LOC107601919,LOC107755265,LOC107683937,LOC107597457,LOC107665348,LOC107737285 other upstream 1286448 12218763 ~ 12219639 (-)

Expression


Co-expression Network