CI01000001_10141190_10146911 (PTGES3, PTGES3A)


Basic Information

Item Value
gene id CI01000001_10141190_10146911
gene name PTGES3, PTGES3A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10141190 ~ 10148058 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10141190_10146911.mRNA
TGACTTTGCCGGAAGAGAAGAACGTGAAGGGAACCTACCGCAGCTGGAGAACGCCTGCTTCCACACGGTGAAGAAGTCAACAGACGACCGCTGCATTGAACGTGCCGTAAAAAACTATGACAATTCTTGCGAATTTATGCCTGGGACATCCTATTCAAGTTCAGATGACACTTCTCTTGATCAACACACCAGCTCAGTCTCTTTGTGGCAGCCAGCAACTGCCAAGTGGTATGACAGACGAGAGGCCGTCTTCATTGAATTCTGTATAGAAGACAGCAAAGATGTCCAAGTTAAATTTGAGAAAACAAAGCTTGATTTCAGTTGTGTTGGAGGAACAGATAACATGAAACACCATAATGAAGTAGAACTATTTGAGTCCATTGACCCAAATGAGTCTAAACACAAACGCACAGACAGGTCTGTGTTTTGCTGTCTAAAAAAAGCAGAATCTGGCAAGTCTTGGCCAAGGTTAACAAAAGAGAAAACGAAGCTTAATTGGCTCAGTGTTGACTTCAACAACTGGAAAGACTGGGAGGATGACTCGGATGAAGAATTGTCCAGTTTTGATCGCTTTTCAGAGATGATGAACAACATGGGAGGGGAAGATGACCTACCAGATGTGGATGGTGCAGATGATGAGGAGTCTGTGGATAGTGATGATGAAAGATCATTTTCAGTAGAGCGTGATATATCAGCCAATATTTGTGTTTATTCAATTATAACAGCAGCCAATATTGTCTGGTTTCGGCAGCAGATATCGTGTTATCGCATTTGCTATTAACCCTCAATTCTAAATATGAGATTTATCGTAAACACTGTTAAAACTAATATAATATGGATTTATCAAATCGATGACGGGACAACATTTGTTGGTGCATAACTAAAAAAAAAAAAATAGGCTGCAGAAGTTCCGGAACATTTTGTCCTTGTTTATGGAAAGAGAGCAACAGTGCTGCTGCCACAAGATGGCGCTATAAATCAATTTCTGCTAAGCGGGCCTGCAAGAATGAGTTGGCACTTTGTGTTTTGAGAAGTGATACTACATTTGACGGGACAGCATCTGTTTTTAAGCTCAAAGTCAGTTAAATTCCTCTTTGGAAAGAGACCCACCGTTTGTACAATACACTGTATGCAGACTGAAGGCTCGTGCAATAGAAAATATCGCCAAACTGCTAGAAGAACGACGACTTTGAACTATGACTATCTGGGGCAAAAACAGTGTCGTGAAGAGTAACTGTAGAAATCAAAACAAAAGCCTCATTTCACCCAATAGAGTTCTTTAAGGTTTTGCTCAATGCTCACCCGTTGAAAACGTTAGCATTCCATAGTATTTCAACGCGTTTATTTAGTAAGTTATTCAGTGTTCCTCCCAGAATTTAAGAAATTACTTTTTATTCACCAAATTCGTGGAGAATCCACTGATCCCAGGCAGCACTTTCATGATCATCCTGATGGTTTGAGGTTCTAGTTTCGACCATTAATGGTAAGGTTAGCTTACTTCAGCCCTGAGGTCATGGAGTCCAGATAAAGGGTCTTTCTGAAGAAGCTTCACAGAGCCGCCATATTTTAAAGGATGCTTAAAGGTTTCCCAGAGTATCTGGGGAAGATGACTTTAACAGTGAAAGGGTGTTTTAAATCAAGACGCATTTACTTGAGAAGCAAAATTACTTAGGATATGGTTTTCTGAAAACAAAATCATCAAATAAGTTAATTCATGCTTAAAATAATAATAAAAAAATCTGACAGTGAGGTCAGAAAAATAAACTTGATTTAAAGGGAACACAAGATTATTTTTCATACCTCACTGATTGATTTAATAATATTTAGATACATACATGTACAGTAAAACAAGACAAAAACACTAAGAATTATTATTTTATTTTTTTTGTATTGTAATGAGCATGTTTATTGTGCTTTCAGGCAATTAA

Function

symbol description
ptges3a Predicted to enable Hsp90 protein binding activity; chaperone binding activity; and prostaglandin-E synthase activity. Predicted to be involved in several processes, including cellular protein-containing complex assembly; prostaglandin biosynthetic process; and telomere maintenance via telomerase. Predicted to be active in cytosol and nucleus. Is expressed in digestive system; endoderm; hindbrain neural keel; nervous system; and pronephric duct. Orthologous to human PTGES3 (prostaglandin E synthase 3).
ptges3 Enables several functions, including DNA polymerase binding activity; Hsp90 protein binding activity; and prostaglandin-E synthase activity. Involved in several processes, including cellular protein-containing complex assembly; chaperone cofactor-dependent protein refolding; and positive regulation of cellular metabolic process. Located in nucleus. Part of chaperone complex and telomerase holoenzyme complex. Biomarker of atherosclerosis; breast cancer; and oligodendroglioma.

GO: NA

KEGG:

id description
K15730 PTGES3; cytosolic prostaglandin-E synthase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10141190_10146911.mRNA True 1928 mRNA 0.38 8 10141190 10148058

Neighbor

gene id symbol gene type direction distance location
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding upstream 35491 10092902 ~ 10105699 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding upstream 60011 10072627 ~ 10081179 (+)
CI01000001_09946111_09958162 NA coding upstream 182944 9944120 ~ 9958246 (+)
CI01000001_09932205_09934551 NA coding upstream 206018 9931155 ~ 9935172 (+)
CI01000001_09782626_09784851 NA coding upstream 356006 9782626 ~ 9785184 (+)
CI01000001_10150798_10152858 MIPA coding downstream 2315 10150373 ~ 10152938 (+)
CI01000001_10321783_10325266 NA coding downstream 173589 10321647 ~ 10325305 (+)
CI01000001_10328133_10329110 NA coding downstream 179982 10328040 ~ 10329110 (+)
CI01000001_10395420_10396473 NA coding downstream 246793 10394851 ~ 10396705 (+)
CI01000001_10420931_10426716 NA coding downstream 272260 10420318 ~ 10427147 (+)
G18851 NA non-coding upstream 8437 10132550 ~ 10132753 (+)
G18850 NA non-coding upstream 8846 10132128 ~ 10132344 (+)
G18840 NA non-coding upstream 20580 10120312 ~ 10120610 (+)
G18839 NA non-coding upstream 21934 10119051 ~ 10119256 (+)
G18816 NA non-coding upstream 52680 10087959 ~ 10088510 (+)
G18815 NA non-coding downstream 11089 10159147 ~ 10164994 (+)
G18813 NA non-coding downstream 22893 10170951 ~ 10180836 (+)
G18864 NA non-coding downstream 54443 10202501 ~ 10209817 (+)
G18870 NA non-coding downstream 63171 10211229 ~ 10211446 (+)
G18873 NA non-coding downstream 75821 10223879 ~ 10260714 (+)
CI01000001_09435836_09436037 NA other upstream 703127 9435836 ~ 9436373 (+)
G17354 NA other upstream 900513 9234463 ~ 9240677 (+)
G17353 NA other upstream 912331 9216022 ~ 9228859 (+)
G17234 NA other upstream 2108707 8032124 ~ 8032483 (+)
CI01000001_07531945_07539781 NA other upstream 2600604 7531541 ~ 7540586 (+)
G18896 NA other downstream 91842 10239900 ~ 10241492 (+)
G18872 NA other downstream 123088 10271146 ~ 10281369 (+)
G18937 NA other downstream 326926 10474984 ~ 10476389 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021727 ptges3a coding NC_007134.7 CM002907.2 27051919 ~ 27059998 (+)