LOC122324856 (LOC107733811)


Basic Information

Item Value
gene id LOC122324856
gene name LOC107733811
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 8402799 ~ 8408257 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219561.1
ATGAACATTACACCGAGGCCAGACTTCTCTCACTCTGGACAGTGGGATGTAGagacagagtccagagatggtCGGAGAGAGAAGCAGGTGTTTGATGCTGTGATGGTTTGCACCGGACACCACTGTCACCCTCATCTCCCTCTACAGGACTTTCCAGGaataaacacttttaagggGAAATTCTTCCACAGCCGTGATTACAAAAGCCCTGAAGAATGGCGAGGAAAGAGGGTAGTTGTGATTGGCATTGGAAACTCTGGAGGAGATATTGCTGTGGAGCTGAGCAGAATGGCCAAACAGGTTTATCTGAGCACTCGAAGAGGATCGTGGATATTGAATCGTGTAGGAGACAAAGGTGTTCCTTTTGATATGATGTTTAATAACAGAGGGCTAATGCTGTTTATTAAATGGTTACTACCTGGATTTCGTAACAAACTGAGAGAGAAACAACTCAATAAACGGTTCGACCACAAGCTCTATGGGCTGCAGCCTGTGCACAGAGTTTTCAGCCAACATCCCACGGTCAATGATGACTTACCAAACCGCATCCTCTCCGGTACCGTCTCAGTCAAGCCAAATGTTCAAGAGTTTCGTGGATCAAGTGTGGTGTTTGAGGATGGCACTGTTGAGGATGACATTGATCTGGTGGTGTTTGCCACAGGCTACACTTTCTCATTCCCCTTCCTGTCTTCACATGTAATTCCTGTCTCAAATAACAAAGCATCCCTGTACAAATACGTATATCCTCCAGAACTGGAGCGGCCAACTTTAGCCGTGATTGGTCTGATCCAGCCCCTGGGAGCCATTATGCCCATCTCTGAGATGCAGGCGCGCTGGGCCACTCGTGTTTTTAAAGGACTAAACCATCTTCCTTCAGCTgaaaaaatggataaaataatTGAGAAAGACATACAAGCGAATTTGAAAGGTTACTGTCCCAAAGTGGCTGCCCTTCAAGTGGACCACATCCCTTACCTAGACACAATAGCAAAGGAAATAGGTGTCCGTCCCAACATTGCTTTGCTTCTCCTGAGGGACCCTGCTGTTGGTTTGAGGGTTTTCTTCGGGCCCTGTACTCCCTACCAGTATCGACTGAGTGGACCGGGGCACTGGAGAGGTGCCCGTCAGGCCATCCTTACCCAATGGGATCGTGTGGCCAAACCCATGAAGACACGGCCCATTCCAGAGCCCTCATCCTCCATCTTATTTTTTTGGCTGGGCCTGTCAGGAGGAGCTGGAGTGATTTTTGCTTTAATGGCAATGCAGAAAAAGGTCCCACTGTTCCTGAATATCTATTAGATCCCACAGATATCCCAAATTCGATTTTTGCATAGCTGATTGTGTTTTGTAATCAAATTTTTGTTAAATCCTTGTCAAACACTGTTGTCAaacaagtgtattttttttgttcttaaattTATCTCATAGCAAGCATTCTGTTTCAGCATTTTCATcacttaatataaatgttaaaaatatgtggAGAAGCCTGAGTCTGCTAGGATTGACATTTTGTGTTTGGTGGTATTATCATCAACTTGTCTA

Function

NR:

description
PREDICTED: dimethylaniline monooxygenase [N-oxide-forming] 5-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0004499 N,N-dimethylaniline monooxygenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0050661 NADP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219561.1 True 1545 mRNA 0.45 7 8402799 8408257

Neighbor

gene id symbol gene type direction distance location
tmed5 tmed5,LOC107733818,LOC107597813,LOC107712842,LOC107581519,LOC108415774 coding downstream 61849 8336607 ~ 8340950 (-)
itpa itpa,LOC107712840 coding downstream 115554 8284042 ~ 8287245 (-)
vamp4 vamp4,LOC107712870,LOC107733808 coding downstream 131576 8261758 ~ 8271223 (-)
myoc myoc,LOC107669152,LOC107581474,LOC107712866,LOC107697243,LOC107733809 coding downstream 144808 8251452 ~ 8257991 (-)
prdx6 prdx6,LOC107712864,LOC107597803 coding downstream 267768 8130352 ~ 8135031 (-)
LOC122325066 LOC107687338,LOC107597794,LOC107728091,LOC107712844,LOC107581495 coding upstream 164295 8572552 ~ 8591185 (-)
prkaa2 prkaa2,LOC107716554 coding upstream 670488 9078745 ~ 9095364 (-)
bsnd LOC107697389,LOC107716551,LOC107566144,LOC107687198,LOC107712846,LOC107581515 coding upstream 927674 9335931 ~ 9339220 (-)
si:dkeyp-51f12.3 NA coding upstream 931106 9339363 ~ 9355284 (-)
si:dkeyp-51f12.2 si:dkeyp-51f12.2 coding upstream 949151 9357408 ~ 9359541 (-)
LOC122325283 NA non-coding downstream 88832 8311491 ~ 8313967 (-)
G136935 NA non-coding downstream 141507 8261083 ~ 8261292 (-)
G136909 NA non-coding downstream 194855 8202900 ~ 8207944 (-)
LOC122325257 NA non-coding downstream 220140 8153665 ~ 8182659 (-)
G136804 NA non-coding downstream 490235 7912148 ~ 7912564 (-)
G137053 NA non-coding upstream 342290 8750547 ~ 8750798 (-)
G137057 NA non-coding upstream 413534 8821791 ~ 8822181 (-)
G137102 NA non-coding upstream 710678 9118935 ~ 9124743 (-)
LOC122324791 NA non-coding upstream 814022 9222279 ~ 9240697 (-)
G137132 NA non-coding upstream 844455 9252712 ~ 9252970 (-)
zyg11 zyg11,zyg11b,LOC107712854,LOC107669142,LOC107658153,LOC107721807 other downstream 603210 7785602 ~ 7799589 (-)
G136754 zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807 other downstream 706734 7693955 ~ 7696065 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other downstream 801197 7544356 ~ 7601602 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other downstream 966301 7432060 ~ 7436498 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other downstream 973517 7424836 ~ 7429282 (-)
LOC122324857 mysm1,LOC107687344,LOC107581496,LOC107597795,LOC107697304 other upstream 183435 8591692 ~ 8600955 (-)
G137054 LOC107660256,LOC107566921 other upstream 410597 8818854 ~ 8819327 (-)
G137056 NA other upstream 412897 8821154 ~ 8821719 (-)
bloc1s2 bloc1s2,LOC107712883,LOC107687185,LOC107581516,LOC107697361,LOC107716556 other upstream 847291 9255548 ~ 9283383 (-)
pcsk9 pcsk9,LOC107687184,LOC107566146,LOC107697372,LOC107716550,LOC107578795 other upstream 917396 9325653 ~ 9335061 (-)

Expression


Co-expression Network