LOC122324873 (kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862)


Basic Information

Item Value
gene id LOC122324873
gene name kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 7321656 ~ 7325677 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219603.1
CACACGTGTTTTGGACTGAAGATATCGGACATCCTCAGCAGTCACtgtgatctgatctgatcagtGCGCGCGGAGCTCCATCTGATCCGTGCGCGCGCGCTTCTGGAGAGGTTGGGGTCCCAGTCCACCACCGCGCTCCAGACCAAAACGCATCATGATCCGACACAAACGGGACTTTCGGAGCACAACACTCGCTTCTGAGATCGAGGTCTCCGAGGCATCCGGACGCAGAGCTCCGAAGGGAAAAATGCATGCTCCACGATGAACTGGGATGTGGTGGTTCACCTTCCTGTGAAATAATAATGGCTTGCCGGGCTGGGTGCTGCTGCTCCAGCGTCGGTTCTCTAAACGAAGACAACGCCAGGTTTCTCATGCTGGCTCTGCTGATCATCATCTACCTGTTGTGCGGGGCGGCGGTGTTCTCGGCGCTCGAGCATCCGAAGGAGACGCTCGCCAAGGAGAGGTGGGCTCAGAGGGTCGAGCAGTTCGCCCGCAAGTACAACCTGAGCCGGGACGACCTCAAGAACTTCCTCAGGAGCTACGAGGAGGCCAATGTGGCGGGAATCCGCGTGGACGCCACCAGACCGAGGTGGGATTGCGGGAGCTTTTATTTCGTCGGAACGGTCGTTTCAACCATCGGTTTCGGGATGACGACACCCGTCACTATCGCCGGGAAGATATTCCTGATCTTTTACGGGCTCATCGGCTGCGCTGCCACCATTTTGTTCTTCAACCTCTTCCTGGAGCGAGTCATCACGGTCATCGCCCTCGTGTTGAAGTCCTTCCACGAGCGCAGAGAGCGCCGCAAAGCCGGGCCGCCCCAGGACTGCCGGCGCCCCTCCACCGACAGCCGAGAGCGGCGCACGGACAGCTTGGCCGGCTGGAAGCCCTCGGTGTACTGCGTCATGCTCATCTTAGGAGCCGCCTCCATCGTGGTCTCCTGCTGCGCCTCGGCCATGTACTCGGCCGCCGAGGGCTGGGAGTACCTAGACGCCCTCTACTTCTGCTTCGTGGCTTTCagcaccatcgggttcggggacATGGTGAGCAACCAGCGGGAGGCTTACAGAGCTCCAGCGGCCTACAGGGTGGGCAACTTCCTGTTCATCCTCACCGGGGTGTGCTGCATCTACTCGCTCTTCAACGTCATCTCCATCGTGATCAAGCAAGTCCTTAACTGGCTCCTGCGGAGGCTGGAGGCTCCCTGTCGCTGCCCGGGGCGAGGGAACCGGCATCCGCGGAGGAACGTGGTGGTCCCCGGCCACATGAGGACCAGGCGGGACAACTCCATCGAGACGGACGGGGTCAACGACAGCGAGGCGGACGGACGGCGGATGTCTGGAGAGATGATCTCCATGAAGGACTTTCTGGCCGCTAATAAAGTGAATCTGGCCATCATGCAGAAGCAGCTGTCGGAGATGGCCAACGGACATCCTCGTCAGTTAGGAAGCGGCTCGAGACACAACGAAGTTCTCGGAGTCGGAGCGCTGGGAATCATGAACAACCGGCTGGCGGAGACGAGCGTAGACAGATAA

Function

symbol description
kcnk13b Enables outward rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to act upstream of or within ion transport and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain and heart. Orthologous to human KCNK13 (potassium two pore domain channel subfamily K member 13).

NR:

description
PREDICTED: potassium channel subfamily K member 13-like

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
K04922 KCNK13, K2P13.1; potassium channel subfamily K member 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219603.1 True 1535 mRNA 0.60 4 7321656 7325677

Neighbor

gene id symbol gene type direction distance location
LOC122324872 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933 coding downstream 8334 7308710 ~ 7313322 (-)
LOC122325143 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding downstream 64082 7255499 ~ 7257574 (-)
LOC122325548 LOC107742115,LOC107664810 coding downstream 95674 7222636 ~ 7225982 (-)
LOC122325011 LOC107742110,LOC107581491,LOC107664824,LOC107658182 coding downstream 163037 7156267 ~ 7158619 (-)
LOC122325354 LOC107742115,LOC107664810 coding downstream 196973 7121351 ~ 7124683 (-)
nfkbiaa NA coding upstream 42634 7368311 ~ 7370195 (-)
LOC122325568 NA coding upstream 214448 7540125 ~ 7540240 (-)
LOC122324531 foxn3,LOC107680774,LOC107755777,LOC107751738,LOC107583483 coding upstream 282455 7608132 ~ 7620574 (-)
angptl1a angptl1,angptl1a,LOC107669140,LOC107712858,LOC107658173,LOC107739855 coding upstream 531345 7857022 ~ 7874571 (-)
faslg LOC107581522,LOC107669138,LOC107712839 coding upstream 655002 7980679 ~ 7983050 (-)
G136716 NA non-coding downstream 39852 7281372 ~ 7281804 (-)
G136696 LOC108231735,LOC107396026,LOC107597861 non-coding downstream 69784 7152468 ~ 7251872 (-)
G136694 psma6b,psma6a,psma6,LOC107580710,LOC107664826,LOC107693094 non-coding downstream 169902 7151390 ~ 7151754 (-)
LOC122324389 NA non-coding downstream 182365 7133748 ~ 7139291 (-)
G136689 LOC107581525,LOC107742114,LOC107664807,LOC107658183,LOC107721806,LOC107597854,LOC107737069 non-coding downstream 191071 7127213 ~ 7130585 (-)
G136717 NA non-coding upstream 35190 7360867 ~ 7396292 (-)
G136724 NA non-coding upstream 160216 7485893 ~ 7487411 (-)
G136758 NA non-coding upstream 255348 7581025 ~ 7652975 (-)
G136772 LOC107721802,LOC107712829,LOC107658155,LOC107669132 non-coding upstream 343903 7669580 ~ 7771831 (-)
G136774 NA non-coding upstream 350266 7675943 ~ 7677043 (-)
G136707 NA other downstream 15932 7296861 ~ 7305724 (-)
G136688 NA other downstream 92693 7125748 ~ 7228963 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other downstream 870157 6432762 ~ 6451499 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other downstream 907643 6410962 ~ 6414013 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other downstream 1018680 6274754 ~ 6302976 (-)
LOC122324874 tmem30ab,LOC107721815,LOC107714749,LOC107658180,LOC107597847,LOC107664818,LOC107581488 other upstream 9711 7335388 ~ 7340455 (-)
LOC122325546 psmc1,psmc1b,LOC107581524,LOC108443803,LOC108428647,LOC105894933,LOC105017692 other upstream 99159 7424836 ~ 7429282 (-)
LOC122325222 kcnk13b,LOC107714748,LOC107581523,LOC107664806,LOC107721805,LOC107658168,LOC107597862 other upstream 106383 7432060 ~ 7436498 (-)
LOC122324530 LOC107721814,LOC107597848,LOC107658179,LOC107712852,LOC107664819,LOC107581482 other upstream 218679 7544356 ~ 7601602 (-)
G136754 zyg11b,zyg11,LOC107658153,LOC107712854,LOC107669142,LOC107721807 other upstream 368278 7693955 ~ 7696065 (-)

Expression


Co-expression Network