LOC122324887 (LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847)


Basic Information

Item Value
gene id LOC122324887
gene name LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26285813 ~ 26287605 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219620.1
cccagccagtgggttaagcagccagttcaacagcagccgcccagccagtgggttaagcagccagttcaacagcagccacccagccagtgggttaagcagccagttcaacagcagccacccagccagctGGTTCAACAACCTAACCAGCAGTTTCCACTTCAGAAGCCAGTGGCACAGACAGAGCCCATTGATAAGTGTACTGTAGCTGATTATGATCATATCCCATGTGGACAACCTGGGATCAGTGGTGCTGAGTGTAACGCTATCAACTGCTGCTTTGATGGACAGCAGTGCTTCTATGGAAGGGCAGTGACTGTCCAGTGTATTCGAGATGGTCAGTTTGTGGTAGTGGTGGCTAGAGATGTTACTGTGCCTCAACTGAGTCTGGATTCGGTTCGTCTGCTGGGTGGAAGTGACCCACCTTGCGCTCCTGTGGATTCCACACCTTCCTTTGCTATATACCAGTTCTGTGACCGCATGCGCGGCACAAGTATGATGGAGGACAGTGGATATGTGGTGTATGAGAACAGAATGACCTCCTCATACGAAGTTGGCGTTGGACCACTTGGATCCATCACGAGGGACAGTCACTTTGAGCTTCTCTTCCAGTGCAGATACTCTGGAACATCTGTGGAAGCTCTGGTTGTGGAGGTCAATTCtgttcctccacctccaccagtAGCTGCTCCTGGACCTCTCAGGGTGGAGCTCAGACTGGCCAATGGCCAGTGTGTCACCAAGGGCTGTGCTGAAGGGGATGAGGCCTACACGTCCTACTACAGTGACTCTGATTATCCCGTCACAAAAGTCCTGCGGGAGCCCGTGTATGTTGAGGTGCACATTATGGAGAGGACAGACCCCAACATTGTCCTGATGCTGGGACATTGCTGGGCGACCTCCACCTCCAGTCCACTCAGTCTACCCCAGTGGGACCTTCTGATTGATGGATGCCCTTACCAGGATGACCGTTATCTGACCACATTGGTTCCAGTAACTGGATCATCTGGTGTGCAGTTCCCGACCCACTACAAGCGCTTTGTTGTGAAGATGTTTACGTTTGTAGATCCAACCTCACTGGCTCCTCTGCAGGAAACGATCTTCATCCACTGCAGTACAGAGGTGTGCCATCCGTCTTCTGGCTCTTGTGAGCAAAGCTGCACCAGGAAACGAAGAGCTACTCCTATTCAGGTCATCATTGGTGAAGCACCTGTGGTTTCTAGTGGACAAGTTACTCTGGTCATGTAAATCTAGTgatataataaacaatttgtGGATCAAGA

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219620.1 True 1280 mRNA 0.51 9 26285813 26287605

Neighbor

gene id symbol gene type direction distance location
fkbp3 fkbp3,LOC107717646 coding downstream 42989 26235419 ~ 26242824 (-)
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding downstream 69350 26214663 ~ 26216463 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding downstream 74628 26197579 ~ 26211185 (-)
actr10 actr10,LOC106608088 coding downstream 101723 26176901 ~ 26184090 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding downstream 109743 26168534 ~ 26176070 (-)
LOC122324888 NA coding upstream 232 26287837 ~ 26288247 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding upstream 2164 26289769 ~ 26292156 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding upstream 11892 26299497 ~ 26301875 (-)
LOC122325330 NA coding upstream 19796 26307401 ~ 26307812 (-)
LOC122325425 mdga2,LOC107704381,LOC107556994,LOC108257548,LOC108411484,LOC106571582,LOC106608140 coding upstream 37626 26325231 ~ 26439923 (-)
G142299 NA non-coding downstream 15769 26269637 ~ 26270044 (-)
G142297 NA non-coding downstream 17688 26267912 ~ 26268125 (-)
G142280 NA non-coding downstream 54330 26230306 ~ 26231483 (-)
G142282 NA non-coding downstream 93895 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 110934 26149891 ~ 26174879 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 23606 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 32265 26319870 ~ 26320141 (-)
G142349 NA non-coding upstream 76414 26364019 ~ 26381273 (-)
G142354 NA non-coding upstream 184752 26472357 ~ 26472760 (-)
G142355 LOC102197881 non-coding upstream 190946 26478551 ~ 26479196 (-)
G142278 NA other downstream 51568 26232024 ~ 26234245 (-)
G142281 NA other downstream 97894 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 188842 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 231344 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 531805 25747667 ~ 25754008 (-)
rps29 NA other upstream 195716 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 635210 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 942198 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1188489 27476094 ~ 27478227 (-)

Expression


Co-expression Network