LOC122324888


Basic Information

Item Value
gene id LOC122324888
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26287837 ~ 26288247 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219621.1
CCTGAAGAGTGCAAAAAGACCAAACGCCAGCTTCTGCACAGTGTGCCTGTCTGTTCAATCATGGTTGTCAGATGGTTGTTGGTTGAGATTTTAGCACTTTGTGCTCTCTGTAATGCTGTTCCTCAGTGGAGTAATCTGCCCCAGAGTCCTCAGAAGGTTCAGCAGCTGGTTCAACGACAGCCACCCAGCCAGAAGGTTCAGCAGCCACAAcaacagccacccagccagAAGGTTCAGCAGCCACAAcaacagccacccagccagAAGGTTCAGCAACCACAAcaacagccacccagccagcaggataagcagccggttcaacagcagccacccagccagtgggttaagcagccggttcaacagcagccacccagccagtgggttaagcagccagttcaacagcagccaccc

Function

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219621.1 True 411 mRNA 0.55 1 26287837 26288247

Neighbor

gene id symbol gene type direction distance location
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding downstream 232 26285813 ~ 26287605 (-)
fkbp3 fkbp3,LOC107717646 coding downstream 45013 26235419 ~ 26242824 (-)
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding downstream 71374 26214663 ~ 26216463 (-)
LOC122324910 peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111 coding downstream 76652 26197579 ~ 26211185 (-)
actr10 actr10,LOC106608088 coding downstream 103747 26176901 ~ 26184090 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding upstream 1522 26289769 ~ 26292156 (-)
LOC122325526 LOC107659807,LOC107756058,LOC107567392,LOC107713860,LOC107659806 coding upstream 11250 26299497 ~ 26301875 (-)
LOC122325330 NA coding upstream 19154 26307401 ~ 26307812 (-)
LOC122325425 mdga2,LOC107704381,LOC107556994,LOC108257548,LOC108411484,LOC106571582,LOC106608140 coding upstream 36984 26325231 ~ 26439923 (-)
LOC122325332 wdr20,LOC107730607,LOC107564583,LOC107704379 coding upstream 281520 26569767 ~ 26574013 (-)
G142299 NA non-coding downstream 17793 26269637 ~ 26270044 (-)
G142297 NA non-coding downstream 19712 26267912 ~ 26268125 (-)
G142280 NA non-coding downstream 56354 26230306 ~ 26231483 (-)
G142282 NA non-coding downstream 95919 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 112958 26149891 ~ 26174879 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 22964 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 31623 26319870 ~ 26320141 (-)
G142349 NA non-coding upstream 75772 26364019 ~ 26381273 (-)
G142354 NA non-coding upstream 184110 26472357 ~ 26472760 (-)
G142355 LOC102197881 non-coding upstream 190304 26478551 ~ 26479196 (-)
G142278 NA other downstream 53592 26232024 ~ 26234245 (-)
G142281 NA other downstream 99918 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 190866 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 233368 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 533829 25747667 ~ 25754008 (-)
rps29 NA other upstream 195074 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 634568 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 941556 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1187847 27476094 ~ 27478227 (-)

Expression


Co-expression Network