LOC122324910 (peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111)



Basic Information


Item Value
gene id LOC122324910
gene name peli2,LOC107567396,LOC107574485,LOC100334245,LOC103047193,LOC108410474,LOC108258111
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26197579 ~ 26211185 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043219656.1
atgaaaataaaaaccacgcaaaaaaaaatcagtttagaGAGTTTAGAGTATCCCTACTTTAATTGTAACttctttttaattagcatttgtATTTCCTTCTGCGCTGAGACCGACACGCTTCTCCTCTAACGCTATGTTTTTGTCTCAGCTCTGATTTATATTCGATTATGTTCGACTTCACGCTGACGTAATGCTCAAAGGCGCTCCGGGACACGTGACTGAGCGCGGCGCGCGGGGGGGGGGAGCGCGGGAACCGCCGCTCCGTGAAGGAAGACGCAAACCTCGCTTTAACCGGCGGCTCCTGCGGCTCAACGCTCCGGTCGGACGCGCGAAGGAGAGAGGCGGAGAGAAAAGAAACGCGAGGCGGAAAGAAAGCCAAACGCGAGGCGCGCGGTCGCCGGCGTCCCCCCCCCGAAGCGCGCGTGGTACGGTCCACTCCGCCGCGAGCCGTTCTTTGATCCGCCGCCGCTCGGCTCTGGAGCGGATTCGGTCCGGATTTTCGCGTTTCACGAGCCGCGGAATAGCCATGCGCTCGCGACAGCCGCCGTGCGGAGATCGACGCGCGTCCCCCGCCTGAAGCAGCGCCCGGTGCGTTCGAGAGACCCGCGCGGAACCCAGGGCTCGATCCGCGGACCGGAGTAACGGAGCGCCGGTCCCATGTTGCAGCCGAACCAGCACGACCACGACCGCTCCAAAGATCCGGTGAAATACGGAGAACTGCTGATCCTCGGGTATAATGGCTCTCTTCCCGGAGGAGACCGCGGTCGAAAGCGGAGCCGCTTCGCTCTCTACCGACGAGCCAAAGCCAACGGAGTCCGGCCCAGCGCCGTCCACATCCTCAGCAACCCGCAGGACAGCAAGGCGGTGAACAGCAGGGGGCAGCACAGCATCTCCTTCACCCTCTCCAGGAACCAGACGGTGGTGGTGGAGTACTGCCACGATGCCGACACCGACATGTtccagATCGGCCGCTCCACCGAGAGCCCGATAGACTTCGTGGTGACGGACACCCCGGGAGGATCCAAGGAGAGCGAGGACTCGTCTTCGGCGCCCAGCACCATCTCCCGCTTCGCCTGCAGGATCGTCTGCGAGCGGAACCCGCCCTACACCGCCCGCATCTACGCCGCCGGCTTCGACTCGTCCAAGAACATCTTCCTCGGGGAGAAAGCCACGAAGTGGAAGAACCCGGACGGTCACATGGACGGACTGACCACCAACGGCGTTCTGGTGATGCATCCGCTGGGGTTCCCTGAAGAACCCAAGCAGGGCGTGTGGAGAGAGATCTCTGTGTGTGGAGACGTCTACGCCCTCCGAGAGACCCGCTCCGGACCCATCCGAGGACAGCTGGCTCAGGGTGAGAGCAGCGCTCTTCAGGACGGCTCTCTCGTGGATCTGTGCGGGGCCACGCTGCTCTGGAGGACGGCCGGGGGTCTGCTGAAGGCCCCGACCTTGCGGCACCTGGACGCCCTGCGCCTGGAGCTGAACGCGGCGCGGCCCCAGTGTCCGGTGGGCCTGAGCACGCTGGCCTTCCCCAGCCTCCCGCGGAGCCACAGCCTGGAGGAGCGGCAGCCCTGGGCCTACCTGAGCTGCGGACACGTGCACGGCCGGCACGACTGGGGCCAGCGGCCCGAGGGCCACCGCGAGCGCAGCGAGGGCCCCGGAGGACGCCGCGAGTGCCCGCTCTGCCGGAGCCTGGGGCCCTACGTGCCGCTGTGGctgggggccgagccgggcttCTACACGGACGCCGGGGCCCCGACCCACGCCTTCGTCCCCTGCGGCCACGTGTGCTCCGAGAACACGGCTCGGTACTGGGCCGAGACCCCGCTGCCCCACGGGACCCACGCCTTCAGACCCACCTGCCCCTTCTGCTCGGCCCCGCTGGCCCCGGGCCCAGGGGTCACACGCCTCATCTTCCAGGGGCCCATCGATTGATGAGGGGGCCGAACGAGGGCCGAAAGGAGGGGTTAGAAACGCGCTGCCTTCCGGTCACGTTCAGATCTCGTCAGGAGCTAGTTAAGATTCAGGCTTTCTACTGATGggtaaaaaaaatgagaaaacacctttaaagttgtccaaatgaagttcttagcaatgcttATTAAACGTTGGTATGTTTACGGTAGGAACGAACACGAtgacatgatctttacttaatatcctgtGACTTTTGGCGTAAAAGAAAAGCCTGAATCACATGATTCTTCATGAAAAGTCTAAAACATCCTTAGCTGTGTTTATGTGCATGAAGCTTTTGACTCGTTGAGAAAAAGACGTGCGCGTTAGCATAGAAATATCCAAGTCACGTCCTTTATATCTTGAAGTGCTGACTCGCTGTGTCTGAATATCACTAATATAACCGTAATGTGATCGTTTAGCCGGCGTGATCTTTCTTCAGTGAAACGTTACCGAAACATTTCCGAACTGTTGCCGGCAGCCATAGACCTCCACAGTACGGAAATAAATGACCGCCGCCAGCTTTTCGTCTTTTCCGTTCATTCGGTGTAAGACGGAAACGTGAACATGGAAGTAAATAATGAGCCGAATTATTAATAACCGTCCCTTTAAGTAGGTTTTCAGCAGTATTTCGTATCTCTGCGTTCCACTAAAAGTTGCCAAAAACACGTGAACGCGGACCGCTTCTCACATGATAAAAGGCTTCTATCCGGTGAAGACACTCATAAAGTCACAGATTCCTCAGCACTGAAATGTTTAGCGCTGTCCCTCCGATCAGATGAAGCAGTATTTCTGGAGCGCTGGAGAAACGTGACGTGAAGGCAGCGGCGCCTCCTGAGGCCGAGCGCTGATCCCCGCCTCCTTTCGCTCCTCTGCGGCCTCCGGCGCTCGACCCTCGACACCCCGCACACTAGAAAGTACAAGATCCTTTACTACAGCACCGCTTTCCAGCAATAAACCCTGCAGAACGACGCAGCGGTTCGAGCCGTGCACTTCCTGACTTCAGCTCAAAAAAACCCCCGAAACAACCGTGGCTCGACCTGGCCTTGTGTTTCAGTTGGTTCTCTTCTTCTGTTCCTTTGGTTTTAGAGTCGtcttcttctgattgttttAGCGTTTAATGACAGTTGTAGCTGCAGTATATGCCGTAGTTGTTTGGAATTGTCAAGATGTCATATTTTTCTACATGACTGTGTTACTAAACTTTTGACTTGAGGTCAGATTGTTTTATATACAAGTGTTTCACATATAGCagtatatagattatatataactctctctctcgctctatatatatatatatatatatgaatatatattattttctgtacATGATATGATTTGAGTCCAGGAGAGCTTGCTGAAGACCGAATGCTCCGACGCGACATCTAACCACAAACACCGCAGGAACCGTCCTCTCACTTCCTATCCgtgtcttgttttctagtactcgtattttaaaaatgactgaatcGAGATGAATTTACTGCACaagtaaaatgacattaattcaATTGCTTTTGCTCAATAGAAGCAAAGATATCTCCCAATGGGGCGATGAATCCTTCCCCCGCTGGCTGACGTTTCTGCTTCGTTTTAAGCACGAAGCCAGACGTGATCTGGtcagtaaatgcatcttgatttgAAGAACGTTGAGGTTTGGTTCTGCTGGAAAACCAGGCCGGAGCAGCAGGTGAGAGACGGGTTGGTTGCGGCGAGCTCTCGATCCGTGTGATGAATGTACGGCGCTTCGTTACCGTCTCCGGTCTCCCTGGTGCTAACGATGACTTCAAACGCTGATTTTAATTGCAGTTGTTTTGCGCTGAACTTCACTGCACTCCTGGAAAACCTTTGATTGTTTCGCTTCTAAAAGGCTGGTGGCGCTTTATGATGACTTTCATCACGAGCAAACGACGAGCGGTCTGTTCCAGCGTGCTTTTTGCCGTTAGCTCTTTTAGAAGGACGTTTCGCCCTCAGTTCTGGAGAAGTGTCTCctcaatggatgtgaatgggtgccgtcggaatgagagtccggTGAAAACGTCGCAAAAATCGATGATAGCTTGGGGGGAAGAAGTGACATTTTGTTAATGGTTTCGTTAATGttgctaaatatattaaaaggtatgtatttttacttaattatgAGAATGTTGAGGAAGCGTTTGATCGAAGCATTTTACAGACATCAAAatgttacacttgaatgttcACAACGTTGAAAGAACGTTCTGAGAACGTTCTCTGTTAGTTGATAATCCAgactcttcctccagtgaagaagaagtgttctggtctgaatcgggagagaaatctgcacggATCTAAACGAATACGTGTCTGGATCTTGACGAGAGAGACGACAAAAGACATCATCTTAaagctggattagtttgatcttctccagatgttcaccgATGAACCGGAGCGCTGCGATTGTTTTTATCTGACCcttattccgacggcacccattcacttccattgctgaCGAAGGCAGACTCCTCCTGATCTCACTTTGGGGTGAACGGTTTCTGGTTAAAAGCTGTTACTGATGAAGGTTTCACGTGTAAAGCGTGACCGGGACACTGAGACGGTGTTTGGATGATAATCGTTACCCGTATGCCTGCACACCTCGCACTGTGCATCTCCGAGCATTATAAGCTAAGCACTCGACAGAGCTTTGTATTGCAGGGTTTAGAGACCGAATAGCTCTACTTTTACCTCACAAGCTGTAGAAGAGACCTCAGTTTATGACCGTATTTTTTTACAGGCCGATTAAAGCGACCGTAAACCGCTCCGATCGCGTCTCGCTCGTTCTAAATTTGTCGAGATGCGGCGCTCACTCGATTGTTTGCGCTCTCGGCCGCCGGAAACGGGGCTTCACCGCTGGAGCCGCTTCCTTGCGTCCTCCAATCTCTGCAACAGATCGCCTGAAAATGAAGCGCCATCTACTGCATGCGAGGGGAACGAATACAAGGACCGCTCCGAAGAACCTCGATGCAGCTCTTTCTGGACGGTTTTAGAAACGCGCATATGCACTAGATTTCCAATGATACGATGCTTTAAGTCACTATGCACTGAATCTCCGCCACAGATCATATTCATGTTAAAAATGCTGCATTGACGTTTTTAACGTCATTAACATTAACAGAAAAGAGCTGCATGGAGACTCCCACCGCGTATTCTTTGGGTTTTTATTCTTTAGCAAAATCACTCTTGAGAAGGTCTCCTTTTATTCTTGCTTGGAAACGAATGCCGCACATTTGTTTGTGTTGAGGTGCAGAAAAACCAATCAAATAAAAACGCAGATAAAACGAATCCAGGCTTTGTGCTCTTTCCGTGTAAAAGCGTCCGCTCAATCAGGCTGCGCGGCGAATGGAGGTGTATCACGCGTCTCTGCCAGCGGGCGGCGCTCACGGAACAGCAGCGATTTTTCTCGATTTATCGCCGTAAACGAACGGAGGCCGCGGCGCGATTCCTTTAACTCCCGAATTCATTTCTTGGCGATCTGTTGCTTTCGTCTGGAATTGCTGCTTCCCTCAAACTACGGCGGTCTTCATCGGAAGCTTCGGGGGCCGAGGAAGCGCGCGCCGCTCGAAACGCTCTTTTCCTCGGACGTTCTGTAGCAGAAAGTCTTCCAGACGAGCTCCACTCACTCTCGACTCCGCTCAGGTTCACACTAGTCCAAGTTTACAAGCGTGGTCAGCAGGGTTAGGATTGTCGCCTCCCTCGGGGGTCAGCGGGAAGGGCGTGTGCATCGCTCGGGAAAGCGCAGACGTGTTCGCTTCGTAGGACTTTTGTACGATGTAGCCCCGCACTGGATGGCGTGAAAAACTGTTGGAttgttgtggtttttgttcCTTCGGAATGAGATGTGAAGATGCTGCACCTTGTGTTTGACCCACTGAATAAAACCTCGATCTCAGACAAGAgtcctgacctttgacctcaccACTGCCACCGATGCACTTAAACCTGTACGAGCGGCTGCTTTCTCACAGCGGACCGATCCGGAACCGTGCTTAAACTCAAGGTGCACTGACAATCACAGATCAGGACATGAATAAAAGTGATCTTTGCATACAGA

Function


symbol description
peli2 Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in Toll signaling pathway and protein polyubiquitination. Predicted to act upstream of or within regulation of Toll signaling pathway. Orthologous to human PELI2 (pellino E3 ubiquitin protein ligase family member 2).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase pellino homolog 2-like

GO: NA

KEGG:

id description
K11964 PELI; pellino

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043219656.1 True 6043 mRNA 0.52 6 26197579 26211185

Neighbor


gene id symbol gene type direction distance location
actr10 actr10,LOC106608088 coding downstream 13489 26176901 ~ 26184090 (-)
LOC122325525 LOC107567392,LOC107713860,LOC107567391,LOC107567390,LOC107756058 coding downstream 21509 26168534 ~ 26176070 (-)
LOC122325524 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058 coding downstream 34528 26159166 ~ 26163051 (-)
LOC122325523 LOC107659807,LOC107567392,LOC107756058,LOC107659806,LOC107713860 coding downstream 45056 26149891 ~ 26152523 (-)
LOC122325522 LOC107659807,LOC107756058,LOC107567392,LOC107659806,LOC107713860 coding downstream 53160 26140448 ~ 26144419 (-)
arf6a arf6,arf6a,arf6.2,ARF6,LOC106608083,LOC105893149 coding upstream 3478 26214663 ~ 26216463 (-)
fkbp3 fkbp3,LOC107717646 coding upstream 24234 26235419 ~ 26242824 (-)
LOC122324887 LOC107659807,LOC107756058,LOC107659806,LOC107567392,LOC107737847 coding upstream 74628 26285813 ~ 26287605 (-)
LOC122324888 NA coding upstream 76652 26287837 ~ 26288247 (-)
LOC122324886 LOC107567392,LOC107713860,LOC107567390,LOC107567391,LOC107756058,LOC107756053 coding upstream 78584 26289769 ~ 26292156 (-)
G142282 NA non-coding downstream 5661 26190063 ~ 26191918 (-)
G142273 LOC107756044,LOC107737847,LOC107556799,LOC107567391,LOC107567392,LOC107713860 non-coding downstream 22700 26149891 ~ 26174879 (-)
G142247 NA non-coding downstream 120506 26021487 ~ 26077073 (-)
G142242 NA non-coding downstream 142014 26018719 ~ 26055565 (-)
G142245 NA non-coding downstream 164381 26017371 ~ 26033198 (-)
G142280 NA non-coding upstream 19121 26230306 ~ 26231483 (-)
G142297 NA non-coding upstream 56727 26267912 ~ 26268125 (-)
G142299 NA non-coding upstream 58452 26269637 ~ 26270044 (-)
G142346 LOC107737847,LOC107556799,LOC107713860,LOC107756044,LOC107567391 non-coding upstream 100026 26311211 ~ 26311698 (-)
G142347 NA non-coding upstream 108685 26319870 ~ 26320141 (-)
G142281 NA other downstream 9660 26185660 ~ 26187919 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other downstream 100608 26088415 ~ 26096971 (-)
LOC122324466 samd15 other downstream 143110 26050829 ~ 26054469 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other downstream 443571 25747667 ~ 25754008 (-)
G142058 NA other downstream 547486 25648492 ~ 25650093 (-)
G142278 NA other upstream 20839 26232024 ~ 26234245 (-)
rps29 NA other upstream 272136 26483321 ~ 26560387 (-)
G142444 slc25a45,LOC107722745,LOC107702892,LOC107662097 other upstream 711630 26922815 ~ 26924987 (-)
LOC122325335 LOC107560343,LOC107662067,LOC107702954,LOC107752242,LOC102202980,LOC101487699,LOC102291410 other upstream 1018618 27229803 ~ 27257482 (-)
tex55 LOC107560331,LOC107702887 other upstream 1264909 27476094 ~ 27478227 (-)

Expression



Co-expression Network