brox (brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230)


Basic Information

Item Value
gene id brox
gene name brox,LOC107710643,LOC107732498,LOC107704042,LOC107568230
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24682627 ~ 24691089 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219695.1
CGTCACCGCCCGACGTACGTCATACCGGAAGAGCGTTCATTGTTTTGGCGTTTCCTGATCCACATCTCCGGAGTCTCTCcgactaaaacaacaaaacatctgGCAGTCGACACGTTTCTGGCGTCCTCTCACCATGACTCACTGGTTCCATCGAAACCCTCTGAAAGCCACAGCGCCTGTGTCCTTTAACCTCTACGGCGTGGCATCCAGTCCCGCGGCCAATAAGATCTGCAATGACTTGAGAACGACTCGTGCCCGGCTGCTGGACATGTTCACCGATGCCACATGTACCCCAGAGATCATGAAGAAATCCAGTGATGAATACTTCGCTCTATTACAGGgATTCATTTTGCCGCTGGATGGAACCACACAAGAGAACAAGCTCCGGTTCATCCAGAACTTCAAATGGACCGACACTTTACAGGGAAATACTGCAAGCGCCCAGCAGGATGCGGTTTTTGAGCTGGTGTCTATGGCCTTTAATGTGGCCGTCTGGTACACCAAGTTTGCCTCACGACTGGCCGGAAAGGAGAATATCACAGAAGATGAGGCCAAAGATGTTCACAAGAGTTTGAAAATCGCCGCCGGACTTTTTAAAACCCTTAAGGAGACTCATATTCCTCGGCTCATCACTCCAGCAGAGAAGGGACGAGACCTGGAGCCGCGAGTCATTGACACCTACATCGTGCAGAGTCAGGCAGAGGCTCAGGAGGTCACCATTGCCAGAGCCATCGAGCTGAAGCACAATGCCTCCCTCATCGCAGCGCTGTCATTTGAGACCGCTAACTTCTACCAGAAGGCCGATCACACTCTGAACACTTTGGATCCAGAATGCAGCAGTAAATGGAAGAAATACCTGCAGCTGAAGCAGCACTTCTACATGGCTTACGCACACTGCTATCATGGACAGACTCTTCTCGCTGGCGATAAATGCGGAGAGGCCATAAGATCCCTGCAGGAGGCTGAGAAATTTTATTCCCGCGCTGAAGCCTTGTGTAAAGAGTACCGTCAGATGAAGGGTCCCGGCAGCACGGCCAAACCCTCGGAGCAGCTCTTCTTTAAGAAGCTGGGCACGTTCATCAAAAACACCCTGGAGAAGTGCCAGAGAGAGAACGGCTTCATTTACTTCCACAAGGTTCCCGCCGAAGCTCCGGCGCTGGAACTGAAGGCCAGTTACGGTTTGGCTGAACCCACTCCCTTCGAGCTCCCGCCTCTCTGCGCCCAGTGCTCGCCCGAAGTCTACGCCAGCTTTGACCTCACCAAAGGACCCAAAGAAGACAAGGCAAAAGCGAAGCACGACGAGGAGATCAAGCCGGTGAAGGAGCCGGATCTGAAGCCTCAGAAGGACACGGGCTGCGTCGTCTCTTAAAGTCCGGCTCAAGCGGCGGCAGACAGGTGAAGCATGATGTCCAGGAGATCTGGAGGAGTCTGGAGTCTTCTCTCGTGTTATTCTCTCCCCCGATCAAATATATACCAATATAACATAGTGATATAACAGTGGCGTCTGTCTCGTGCTCGGATTCTGTTTAAGGTGTTTCGTCTGCAAGCGACAGATGTTCTAATGAAGGACTGTACGACTAAAATATGACCAACAGTTAATCCTAGTAACCCAGACCCAATCGTTTCTCTGTAGCGAAATGACCCTGGTGAGATTTTTAAGGTTTATCGGGTCCATTGATTGGAGAATAACTTATATAGATCTCTAAATTCGtccttattgtttttttttaaacgatgtTCAGACAATTAACTCTTATTTAAATAATCCATTGATTAGTGCAAATGTTAAACTGCATCTAAACTAGTTGAATTTCcgaataaaatacaaatctcaCCCCAA
>XM_043219697.1
TTCTCCTTTCTGGATGGGATTTCTGATCTCTCaaagttttacctttttttgggctttgttttttttttggaccagTAGCATGCAGGCTTTGTGCATAATCGAACAGTTATGGCAAGCATTGACTTGAGAACGACTCGTGCCCGGCTGCTGGACATGTTCACCGATGCCACATGTACCCCAGAGATCATGAAGAAATCCAGTGATGAATACTTCGCTCTATTACAGGgATTCATTTTGCCGCTGGATGGAACCACACAAGAGAACAAGCTCCGGTTCATCCAGAACTTCAAATGGACCGACACTTTACAGGGAAATACTGCAAGCGCCCAGCAGGATGCGGTTTTTGAGCTGGTGTCTATGGCCTTTAATGTGGCCGTCTGGTACACCAAGTTTGCCTCACGACTGGCCGGAAAGGAGAATATCACAGAAGATGAGGCCAAAGATGTTCACAAGAGTTTGAAAATCGCCGCCGGACTTTTTAAAACCCTTAAGGAGACTCATATTCCTCGGCTCATCACTCCAGCAGAGAAGGGACGAGACCTGGAGCCGCGAGTCATTGACACCTACATCGTGCAGAGTCAGGCAGAGGCTCAGGAGGTCACCATTGCCAGAGCCATCGAGCTGAAGCACAATGCCTCCCTCATCGCAGCGCTGTCATTTGAGACCGCTAACTTCTACCAGAAGGCCGATCACACTCTGAACACTTTGGATCCAGAATGCAGCAGTAAATGGAAGAAATACCTGCAGCTGAAGCAGCACTTCTACATGGCTTACGCACACTGCTATCATGGACAGACTCTTCTCGCTGGCGATAAATGCGGAGAGGCCATAAGATCCCTGCAGGAGGCTGAGAAATTTTATTCCCGCGCTGAAGCCTTGTGTAAAGAGTACCGTCAGATGAAGGGTCCCGGCAGCACGGCCAAACCCTCGGAGCAGCTCTTCTTTAAGAAGCTGGGCACGTTCATCAAAAACACCCTGGAGAAGTGCCAGAGAGAGAACGGCTTCATTTACTTCCACAAGGTTCCCGCCGAAGCTCCGGCGCTGGAACTGAAGGCCAGTTACGGTTTGGCTGAACCCACTCCCTTCGAGCTCCCGCCTCTCTGCGCCCAGTGCTCGCCCGAAGTCTACGCCAGCTTTGACCTCACCAAAGGACCCAAAGAAGACAAGGCAAAAGCGAAGCACGACGAGGAGATCAAGCCGGTGAAGGAGCCGGATCTGAAGCCTCAGAAGGACACGGGCTGCGTCGTCTCTTAAAGTCCGGCTCAAGCGGCGGCAGACAGGTGAAGCATGATGTCCAGGAGATCTGGAGGAGTCTGGAGTCTTCTCTCGTGTTATTCTCTCCCCCGATCAAATATATACCAATATAACATAGTGATATAACAGTGGCGTCTGTCTCGTGCTCGGATTCTGTTTAAGGTGTTTCGTCTGCAAGCGACAGATGTTCTAATGAAGGACTGTACGACTAAAATATGACCAACAGTTAATCCTAGTAACCCAGACCCAATCGTTTCTCTGTAGCGAAATGACCCTGGTGAGATTTTTAAGGTTTATCGGGTCCATTGATTGGAGAATAACTTATATAGATCTCTAAATTCGtccttattgtttttttttaaacgatgtTCAGACAATTAACTCTTATTTAAATAATCCATTGATTAGTGCAAATGTTAAACTGCATCTAAACTAGTTGAATTTCcgaataaaatacaaatctcaCCCCAA

Function

symbol description
brox Predicted to be located in membrane. Orthologous to human BROX (BRO1 domain and CAAX motif containing).

NR:

description
PREDICTED: BRO1 domain-containing protein BROX isoform X1

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219695.1 True 1840 mRNA 0.49 13 24682627 24691089
XM_043219697.1 False 1725 mRNA 0.48 12 24682627 24690165

Neighbor

gene id symbol gene type direction distance location
LOC122324924 LOC107704029 coding downstream 153 24678486 ~ 24682474 (-)
LOC122324925 LOC107559109,LOC107669446,LOC100330838,LOC107704031,LOC107568211,LOC107732492 coding downstream 5003 24674210 ~ 24677624 (-)
disp1 disp1,LOC107732496,LOC107704044,LOC107568221 coding downstream 9565 24620458 ~ 24673062 (-)
LOC122325099 LOC107732491,LOC107704049,LOC107559114,LOC107568220,LOC100536673,LOC107726709,LOC107669415 coding downstream 95373 24583784 ~ 24587254 (-)
rnf8 rnf8,LOC107704050,LOC107732490,LOC107726708,LOC107669457,LOC107559076 coding downstream 100049 24575348 ~ 24582578 (-)
mia3 mia3,LOC107739181,LOC107568205 coding upstream 8083 24699172 ~ 24721106 (-)
hlx1 hlx,hlx1,LOC107704027,LOC107567024,LOC107739182,LOC107728099 coding upstream 138760 24829849 ~ 24832990 (-)
naprt naprt,LOC107704039,LOC107669423 coding upstream 161380 24852469 ~ 24861840 (-)
c20h8orf82 LOC107669429,LOC107728113,LOC107704038,LOC107567028,LOC107739166 coding upstream 174370 24865459 ~ 24867178 (-)
tbc1d7 tbc1d7,LOC108443239,LOC108260306 coding upstream 385399 25076488 ~ 25085331 (-)
LOC122325459 tlr5b,tlr5a,LOC107712572,LOC107669417,LOC107559111 non-coding downstream 65980 24611866 ~ 24616647 (-)
G141624 NA non-coding downstream 137078 24545016 ~ 24545549 (-)
G141622 NA non-coding downstream 158796 24522383 ~ 24523831 (-)
G141634 NA non-coding downstream 160416 24521977 ~ 24522211 (-)
G141627 gphn non-coding downstream 238437 24440791 ~ 24444190 (-)
G141662 NA non-coding upstream 913 24692002 ~ 24692486 (-)
G141648 NA non-coding upstream 33853 24724942 ~ 24726684 (-)
G141650 NA non-coding upstream 35972 24727061 ~ 24727733 (-)
G141676 NA non-coding upstream 85526 24776615 ~ 24776863 (-)
G141679 NA non-coding upstream 97583 24788672 ~ 24788904 (-)
G141651 NA other downstream 35206 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 150264 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 164884 24254393 ~ 24517743 (-)
G141502 NA other downstream 675962 24004687 ~ 24006665 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other downstream 859577 23785752 ~ 23823050 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other upstream 147563 24838652 ~ 24851779 (-)
mettl24 LOC107738893 other upstream 603755 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 635419 25326508 ~ 25377416 (-)
G142058 NA other upstream 957403 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 1056578 25747667 ~ 25754008 (-)

Expression


Co-expression Network