dnmt3aa (LOC107593266,LOC107721450,LOC107685348)


Basic Information

Item Value
gene id dnmt3aa
gene name LOC107593266,LOC107721450,LOC107685348
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 21583612 ~ 21621071 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219701.1
TAGGACCCCGCGAACTCCTTCCCGCTGACGGGCCTTTGCGGCGTCTGAAGCCCGAGACGGCGGAGCGGAGCAGGCCGGTGCCGGTGCCGGGGAGGGTCAGGACGGGGAGAGACGCGGAGGGAAGACGGGCAGCGCGCGACCACCGGAGGGTTCAGGCCCGGGGCTGCATGGCGAAACGGagtCCAGAGGCGGAACAGGAAGTGTGTGAGGTCACACGTGAAGAGAGAGTGACGGACACACCAACACGAAGAGTCGGACGACCCGCTCGAAAACGCAAAGCACCAGGAGTGGGTAGTTGTATTGAGGGCGTGGTCTGTATGAAGAAGGCGGGGTGTAACGGTGAAACAGAGAATCGGGTTTCAAAGAAAAACGTGGAGCAGAGCGACTCCTCCCCTGACTCCACCCACCAGAACGGCACAGACACGCCTTCCGGAGCCGACGGAGACTCCGCCCCTTCCACTCCACGGAAGAAACGAGGGCGGCGGAAACTTCAGCACCCGGAGCGCCACATTGAGGAGGACGACACCAGCAGCGACACCAGCAGAGGAGAGAGCGACGGGGGTCGACTGAGGGGCCGGCAGGGCTGGGACATAAGTCTGAGGAGACGTCCCGTTCAAAGAGAAACCTTTCAGGCCGGAGACCCCTATCACATCAGccgcagagagaaagaggagtgGCTTGCCCGCTGGAGGAAGGAGAAGGTCAGAGAGGCAACAGAAGAGGAGAAGGCCCAACTGGTGATGACCATGAGTGACATGATGGACGACCAATCAGCTGTGGGCCCCCAGAAGGAGGAGGAGTCAGCCATCAACCTCCCGTCCACACCCACACCTCAGCAGCAGCACACTGACCCCGCCTCCCCAACAGTCGCCACGACGCCTGAACCGCCTCCCGTTGCCTGCGGCAACAAAGTGATGGCGAGGTCCTCAGAGATGGATCTGGAGTACGAGGACGGCCGTGGGTTCGGGATCGGGGAGCTGGTCTGGGGGAAGCTGCGGGGGTTCTCCTGGTGGCCCGGCCGGATCGTGTCGGGGTGGATGGCGGGTCGCAGTCGGGCCGCTGAAGGCACCCGCTGGGTCATGTGGTTCGGAGATGGCAAGTTCTCTGTGGTGTGCGTGGAAAAACTGTCACCCTTGAGCACATTCAGCTCGTCTTTTCATCAGCCCACCTACAACAAACAGCCCATGTACAGAAAAGCCATCTATGAAGTTTTACAGACGGCGGGTATGCGTGCCGGTAAACCgttccctgtgtgtgtgtccgccgATGACTTGGACATAACTAACGATGTTGAAAAGCACACTCGGCAGATGATTGAATGGGCCAACACTGGGTCCCCTTCTGGTGCCAAAGGCCTGGAGCCGCCACCAGCGGAGCGGAGCCCGTATACTGAGGTGTATCCAGAGATGTGGGTGGAGCCAGAGGCTGCTGCGTACACGGCTCCGGCCCCCGCCAAGAAACCCAGGAAGAACAGTGTTGAAAAACCCAAAATCAAAGAGATTATTGATGAAGGAACCCGagagaGAGTCGTATGTGAAGTCAGACAAAAGACTCGCAATATTGAAGatatttgtaTTTCCTGTGGAAGTATGAACGTAGCACTAGAACATCCTCTGTTTGTTGGAGCCATGTGCCGGAGCTGCAAGAACTGTTTTCTGGAGTGCGCGTATCAGTACGACGATGACGGTTATCAGTCATACTGCACCATCTGCTGCGGAGGACGAGAAGTGCTCATGTGTGGGAACAACAActgctgcagaTGTTTCTGCGTGGAGTGTGTGGATCTGCTCGTGGGGCCCGGATCTGCACAGGCCGCTATCCGCGAAGACCCCTGGAATTGCTACATGTGCTGCAGCAGGAACGTCTCGGGTCTCCTGAGGCGCAGAGACGACTGGACCTCACGACTGCAGCTGTTCTTCGCCAACAACCACGACCAGGACTTTGAACCGACAAAGTTGTTTTCACCAATGTCAGCTGAGAacagacagccaatcagagtgcTTTCTTTATTTGATGGCATCGCTACAGGGCTGCTGGTGCTGAAGGATCTGGGTATTCAGGTGCAGCGGTACGTAGCGTCAGAGGTGTGTGAGGACTCCATCACGGTGGGGATCGTGCGACACCACGGACAGATCATGTACGTGGGAGACGTCAGGAACATCACGCGCAAACATATTCAGGAATGGGGTCCGTTTGATCTTGTGATCGGCGGAAGCCCCTGTAACGATCTGTCCATCGTCAACCCTGCCAGGAAAGGCCTGTACGAGGGCACCGGGCGTCTGTTCTTTGAGTTCTACCGGCTGCTTCACGAAGCCCGACCCAAAGAAGGAGACGAGCGGCCGTTCTTCTGGCTTTTTGAAAATGTCGTCGCCATGGGAATCAGTGACAAGAGAGACATCTCGCGCTTTCTGGAGTGTAATCCAGTAATGATCGATGCTAAGGAGGTGTCAGCCGCACACAGAGCTCGGTACTTTTGGGGTAACTTGCCTGGAATGAATCGTCCTCTGACTGCCATGATGAACGATAGACTCGACCTGCAAGACTGTCTGGAACATGGACGCACAGCTAAGttcggAAAAGTGCGAACCATCACAACTCGCTCAAACTCAATAAAACAGGGCAAAGACCAGCACTACCCCGTCTACATGAACAATAAAGAGGATATCCTGTGGTGCACGGAGATGGAGAGAGTTTTCGGCTTCCCCGTCCATTACACAGATGTGTCCAACATGAGTCGTCTCGCCAGACAAAGGCTTCTGGGAAGGTCGTGGAGCGTGCCTGTGATTCGCCACCTCTTCGCTCCCCTCAAAGAATACTTTGCCTGTTACTGAAGCTCCGCCCACCACACATCATGATGGCGTCGTGACATCCCTCCTCTTCCTTTCCTGCATATCCAATAAGCTCCACCTTCTTGTGATCGTCATGTTTGCTTGTGGCCTCTGAATGGCTGGTGCTAtcctaatattaatattcaatcCTCTAGACAGTCACATTTcagatatttatttgaaaacaactgAATCCAGATTTCGTTGTATTTTATTGTCgtcgttttagtttttttttttttttttggtcatgttCCAACTGTGacaactctttctctctcacacaactAACAGagacaaaatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcgcaaGTGTATGTTTATCCGAGTGTAAAAATATAGAGCACAAAAAGCTGGATGACAGGTATGAAACAGAAGCAGATGCTGTCTGAATACTCAAAGGAGGCAAATACCGTCAACCCCTCAAACTTATGTTACGCCATGAACTAACCAGGTATGATATGGAAACCTTCACGAATCAAGTCatatttgatgtttaatatataacGAATCTCACAGAAAATATGTCTGTCATATTTCACACTGATATCAGATTTATTGCACtattttaatgacaattaagtatatttaccacataaaaaggaatttttttcttaacatggattaattagcattatttaatttattcatttgcaatatggcatatatatatatatatatatatatatatatatatatatatatatatatatcataaagcaaaaaaatgctgttctaaAATGGGCTTAAAAAATTtatcgtattttttttttgaattggATACTGTGTGATTGTGGGCATAGTTTTATGAGATTGATTAGGCAGTGCTACGGTTCTATTTGTACTATTACATTAATAGAAATCAGGTAAATCACATCTACTTAAGACAAAGTGTCAGATTAACTTAAGAAGAAATGCAATTTATCACTTATCGCTTTGTCATGTGGTGCCTGGTTAGCACACGTGTCTGTAACATCGACACATACATCACACATAAACACGTtttctgtgagagagagaagatgtGCTTGAAAAATCAACAATACACTGTTTACAGGTTGCGCTCTTATTATGGTACTACTAAACTTCAGCAACTATTCAGTTACAACTAACTCCACTAtggtgctctctctctctctctctctctctctctctttgtttctctctcagcaatacaaacacagcaaacagtcCTGTATGATGCCTTTCTGCTGGAGCCTATAGGGCACATATGAGAGAGCTGTGtcccataacacacacacatgcatgctgAGAGCGGTTACACACTCATAcaccttaaagggacagttcacccaaaaataaaaattccgtCCTCTTTTGCTCACCCTCACGTCTTTCCACATGCAAACAGCAGTTCAATTTGGTTGTCAAATCACTTATTAGTGCTTAATCCTGCTCTGTAGACAGTTCcaatttaagcattttaaaaccaaattaaCTCATTTACGCAAGATGTCACAGTGAACAATGTATGTTTTGACTCCCTAGTGTTGCCAgatcttgttaaaaaaaaagcagataatataatgagtttaaaaacaaacgcaTTATCTCGTAAACAAGCCACATATGAAAATTCTgtgaaacacacatttttaaaaaactattaatgAGTTTTGCTTGTAATAAGTGGAAGTGGCAACCCTTCAAGAGCGTGATCCCTAAATCAGCCTTCCAAACACAACAGCTCTGTTGACGGTGCTTCAATTTAAATTGACGAACACAACGATTTTTTGAACGCTTTGATGAGGTGAATAACTGATGACATTGGTTGCACTTTgggtgaactgctcctttatgagagtttatttactttaaaagatCATGTCGTTTGCTTTCGTCTCTGATG

Function

NR:

description
PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like isoform X3

GO: NA

KEGG:

id description
K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219701.1 True 4737 mRNA 0.48 23 21583612 21621071

Neighbor

gene id symbol gene type direction distance location
dtnba LOC107721443,LOC107685345,LOC107593267,LOC107550403 coding upstream 2078 21556765 ~ 21581534 (+)
LOC122324300 kif3c,LOC107690993,LOC107593268,LOC107697206,LOC107721442,LOC107719402 coding upstream 33588 21534504 ~ 21550024 (+)
tfap2b tfap2b,LOC107697208,LOC107719371 coding upstream 156472 21414861 ~ 21427140 (+)
tfap2d tfap2d,LOC107690996,LOC107593304,LOC107721448,LOC107697209,LOC107550400 coding upstream 172963 21401025 ~ 21410649 (+)
hadhb hadhb,LOC107719432,LOC107721451,LOC107690999 coding upstream 258838 21315465 ~ 21324774 (+)
gpatch2 LOC107708325,LOC107593261,LOC107685352,LOC107550410 coding downstream 35592 21656663 ~ 21664934 (+)
esrrgb esrrgb,LOC107685376,LOC107697200,LOC107550385,LOC107719365,LOC107708321 coding downstream 46995 21668066 ~ 21680920 (+)
fosab LOC107697196,LOC107719360,LOC107685356,LOC107550415,LOC107742716 coding downstream 145343 21766414 ~ 21768602 (+)
tmed10 tmed10,LOC107697197,LOC107685358,LOC107593259,LOC107550417 coding downstream 150221 21771292 ~ 21774369 (+)
eif2b2 eif2b2,LOC107719358,LOC107685362,LOC107697194,LOC107742715 coding downstream 153813 21774884 ~ 21779245 (+)
LOC122325460 NA non-coding upstream 30498 21551685 ~ 21553114 (+)
G140691 NA non-coding upstream 64636 21516791 ~ 21518976 (+)
G140707 NA non-coding upstream 95369 21483605 ~ 21488243 (+)
G140708 NA non-coding upstream 100335 21482627 ~ 21483277 (+)
G140686 NA non-coding upstream 148816 21434593 ~ 21434796 (+)
G140721 NA non-coding downstream 15438 21636509 ~ 21637194 (+)
G140698 NA non-coding downstream 77350 21698421 ~ 21699258 (+)
G140747 NA non-coding downstream 111504 21732575 ~ 21735672 (+)
LOC122325564 NA non-coding downstream 114895 21735966 ~ 21738747 (+)
G140784 NA non-coding downstream 219152 21840223 ~ 21840465 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 381650 21168775 ~ 21201962 (+)
G140533 NA other upstream 481102 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 791909 20789876 ~ 20791703 (+)
LOC122324291 NA other upstream 909223 20673461 ~ 20674389 (+)
trdn LOC107602167,LOC107727612,LOC107675223 other upstream 991453 20554113 ~ 20592159 (+)
G140785 NA other downstream 223075 21844146 ~ 21844701 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other downstream 850690 22471761 ~ 22476774 (+)
fkbp1b fkbp1b other downstream 885656 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 1123341 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 1221734 22842805 ~ 22860327 (+)

Expression


Co-expression Network