CI01000001_10395420_10396473


Basic Information

Item Value
gene id CI01000001_10395420_10396473
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10394851 ~ 10396705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10395420_10396473.mRNA
CTATAAAGAGGCACTCGTGTGATTCATAAGGCAGAATCCTTGTCTCTTTGAGTTTTTATCAGGGACTGTGTATGTTTATGTGTGGATGAGCCAGCAGAGAAACACATAGTGTTACAGAGTATCAGGATATCAACTTTGTGAAAGTGACTGAATGGAGGGTACAGAGGCACTAGGGCTGTATTATTGTAAAAATGAGCGGAGAACTATGGAAATCCATTTCCACGTAATAAAATGCTCTGGTAAATCATAATTATGACATACTAAGTCATTATGAGATCTTTTAATCTCAAGTTCTACTTCTTATGTCTTAATTATGACTTATCTCATAATATAAACTTGTCATAATTTGGATTTTTTTATCTTATTATTGAGTTTTTGTTGTAATTATGACTTTAATGCCACACATTTAATGTTTTATCTCTTAATTTATCTCATTATTATGAGTTTTTATGTCATAGTTTTAGTTTTTTCTTGCGTGGCAGGAATGGGATTCAATAAACAGCAGCAGGGTTACAAAGTTTAGTTAATAATAAAAAAGTCTAAGACTACTTTAAGAGCTTTAACTCATTATGGCCAACTTAACTCGGTCTAAAGTTGAATTGAAAACATTGTGGCTAACTTTGGAAAGGCAGTATTTCTCAAGACAGTGGACTGTGCGCAAGGGTCCTGATAACAGTTCATCATACGTGATGACCTCGGACAGTATGTTATTTGCGGTATCTGAGTTTGTCGTACACAAGAAAACAAAGATAGGACAAGAAAAACCGAGATCACTGTACACCCACACGCACATGTACACATACACCGAGTGCACCGTCACAATTCAGGCAATGTCTTTATTGCAGCGTGTGTATGTGCATATGTCTACGGGGATACGTTTAATGACAGGAAGTGCTTTGCAGTCCTACAGCCAGTGGAGGAGCAGGAGGAAGTTGAAGGAAGGAGCAGAAGATACAGAGGATGCAAAGGAGAGCGTGGTTTGGAGTCCAGCCCCCATAGTCTATGGCATAGTGAACAACAATCTGCTTCCGTCTCTCTCTATATGTATACATAGTCCCAGTTTCATTCCCAGAATGCAGCTGAGCTCCAGTTCAGAGCGTGATGGTGTGAGAGGGAACCAGACTAAAGAATGGGAACAGAGTGCATTCTCCTCTCGCAGATCTGCCCCTCTCCTGGGATGCGGAGAGTCCCGGGCAGACTGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10395420_10396473.mRNA False 1205 mRNA 0.40 3 10394851 10396473

Neighbor

gene id symbol gene type direction distance location
CI01000001_10328133_10329110 NA coding upstream 65741 10328040 ~ 10329110 (+)
CI01000001_10321783_10325266 NA coding upstream 69546 10321647 ~ 10325305 (+)
CI01000001_10150798_10152858 MIPA coding upstream 241913 10150373 ~ 10152938 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding upstream 246793 10141190 ~ 10148058 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding upstream 289152 10092902 ~ 10105699 (+)
CI01000001_10420931_10426716 NA coding downstream 23845 10420318 ~ 10427147 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 126789 10523262 ~ 10530543 (+)
CI01000001_10538498_10539667 RPS26 coding downstream 141915 10538388 ~ 10539846 (+)
CI01000001_10573770_10582123 LMBR1L coding downstream 177297 10573770 ~ 10582238 (+)
CI01000001_10582439_10582802 NA coding downstream 185905 10582378 ~ 10582821 (+)
G18876 NA non-coding upstream 3253 10390688 ~ 10391598 (+)
G18878 NA non-coding upstream 50730 10340037 ~ 10344121 (+)
G18880 NA non-coding upstream 56702 10336887 ~ 10338149 (+)
G18874 NA non-coding upstream 58935 10284763 ~ 10335916 (+)
G18884 NA non-coding upstream 74776 10304931 ~ 10320075 (+)
G18882 NA non-coding downstream 5757 10402230 ~ 10403910 (+)
G18951 NA non-coding downstream 35484 10431957 ~ 10433760 (+)
G18967 NA non-coding downstream 37746 10434219 ~ 10434542 (+)
G18968 NA non-coding downstream 39297 10435770 ~ 10435995 (+)
G18969 NA non-coding downstream 40180 10436653 ~ 10436873 (+)
G18872 NA other upstream 113482 10271146 ~ 10281369 (+)
G18873 NA other upstream 134137 10223879 ~ 10260714 (+)
G18896 NA other upstream 153359 10239900 ~ 10241492 (+)
CI01000001_09435836_09436037 NA other upstream 956788 9435836 ~ 9436373 (+)
G17354 NA other upstream 1154174 9234463 ~ 9240677 (+)
G18937 NA other downstream 78511 10474984 ~ 10476389 (+)
G19039 NA other downstream 454451 10850924 ~ 10853983 (+)
G19314 NA other downstream 1104721 11501194 ~ 11558673 (+)
G19395 NA other downstream 1284849 11681322 ~ 11681817 (+)

Expression


Co-expression Network