slc25a27 (slc25a27,LOC107710953)


Basic Information

Item Value
gene id slc25a27
gene name slc25a27,LOC107710953
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 18833395 ~ 18840324 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219728.1
ACGCGGAAATCTCCAGGCAATGTCGTAACGATTCTGATGGTGATGACGCGCACGACACAAGTTGCTGCAAGTGAGAGAACATTAAAAGGAAGgaacCAGAGGACACCTGCAATGTCTCCTGTACAAGAAAATTCTCGGTGGCCCCGAGTATCAAAGTTCACTCTTTCAGCATGTGCTGCAACTGTTGCAGAATTAGtcacaTTCCCTTTGGACCTCACTAAAACCAGACTTCAGATACAGGGTGAAGGTGGTTCCAGACAGCATGGTGGTAGTGTTCAGCCTCCAAAATACAGGGGAATGCTGAGCACAGCTATGGGTATAGTGCGAGAAGAGGGGCCCTTAAAACTGTGGCAAGGGGTCACACCAGCTATCTATAGACATATAGTGTATTCAGGCGGCAGGATGTTGGCTTACGAACAGCTCAGGGAATCGGTCTTGGGAAGATCTGAAGATGGCGTTTTTCCAGTCTGGAAAGCAGTGATCGGCAGTATGATATCAGGTGCCTTGGGCCAGTTCATCGCTAGTCCGACAGATCTGGTGAAGGTTCAGATGCAAATGGAGGGCAGGCGCCATCTGGAAGGGAAACCGCCAAGagtacATGGGGTTTACCATGCTTTTACGAAGATCATAGCAGAAGGAGGAATACGAGGCCTTTGGGCTGGATGGGTTCCCAATGTTCAGAGAGCTGCGTTGGTCAATTTAGGAGatCTCATGACATACGATACCGTAAAGCACTTTCTACTGAGAAGCACCTCCATACCGGACAACAGCATTTGTCATGGATTGGCGAGcatATGCTCAGGATTGGTTGCGGCTATTATGGGAACGCCAGCCGATGTGGTGAAAACCAGAGTAATGAACCAGCCACGGGATTCAAACGGGAGGGGTCTTCTCTACAGGTCTTCAACTGACTGTCTTGTTCAGTCAGTGAGAAAAGAaggatttttttccctctataAAGGATTTCTACCAACTTGGTTTAGAATgGCTCCCTGGTCTTTGACTTTCTGGCTtacatttgagcaaatgagacGAGCAATGGGCATTAgttcattttgatgattttaagaGTTGGACCTAGTGTATTTTTCTGAGCTAAACATTCCAGACctatttttttaggtttgaaTTTAATTGTGTGCAGGTACACGATGCAGGACATGATTATTAAGAGAAAATTGAGATTGATCACTGTATGTCTTGGAAGAAATAAAATGGCACAGCAATCA
>XM_043219729.1
TCTTTGGTGTGGGAAATGTGGTTTTAGGTGCCTGACGCTTCTTTTTTGTAGTCTAGTCTACAACGCATTACGTAAGGGGGTCGGTACTCGGTAACTACACCGACCAACCGGCATGACTTAAAAAACGGATCGCCTGTTATTAAAGgaacCAGAGGACACCTGCAATGTCTCCTGTACAAGAAAATTCTCGGTGGCCCCGAGTATCAAAGTTCACTCTTTCAGCATGTGCTGCAACTGTTGCAGAATTAGtcacaTTCCCTTTGGACCTCACTAAAACCAGACTTCAGATACAGGGTGAAGGTGGTTCCAGACAGCATGGTGGTAGTGTTCAGCCTCCAAAATACAGGGGAATGCTGAGCACAGCTATGGGTATAGTGCGAGAAGAGGGGCCCTTAAAACTGTGGCAAGGGGTCACACCAGCTATCTATAGACATATAGTGTATTCAGGCGGCAGGATGTTGGCTTACGAACAGCTCAGGGAATCGGTCTTGGGAAGATCTGAAGATGGCGTTTTTCCAGTCTGGAAAGCAGTGATCGGCAGTATGATATCAGGTGCCTTGGGCCAGTTCATCGCTAGTCCGACAGATCTGGTGAAGGTTCAGATGCAAATGGAGGGCAGGCGCCATCTGGAAGGGAAACCGCCAAGagtacATGGGGTTTACCATGCTTTTACGAAGATCATAGCAGAAGGAGGAATACGAGGCCTTTGGGCTGGATGGGTTCCCAATGTTCAGAGAGCTGCGTTGGTCAATTTAGGAGatCTCATGACATACGATACCGTAAAGCACTTTCTACTGAGAAGCACCTCCATACCGGACAACAGCATTTGTCATGGATTGGCGAGcatATGCTCAGGATTGGTTGCGGCTATTATGGGAACGCCAGCCGATGTGGTGAAAACCAGAGTAATGAACCAGCCACGGGATTCAAACGGGAGGGGTCTTCTCTACAGGTCTTCAACTGACTGTCTTGTTCAGTCAGTGAGAAAAGAaggatttttttccctctataAAGGATTTCTACCAACTTGGTTTAGAATgGCTCCCTGGTCTTTGACTTTCTGGCTtacatttgagcaaatgagacGAGCAATGGGCATTAgttcattttgatgattttaagaGTTGGACCTAGTGTATTTTTCTGAGCTAAACATTCCAGACctatttttttaggtttgaaTTTAATTGTGTGCAGGTACACGATGCAGGACATGATTATTAAGAGAAAATTGAGATTGATCACTGTATGTCTTGGAAGAAATAAAATGGCACAGCAATCA

Function

symbol description
slc25a27 Predicted to be involved in response to cold. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including Kupffer's vesicle; brain; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in schizophrenia. Orthologous to human SLC25A27 (solute carrier family 25 member 27).

NR:

description
mitochondrial uncoupling protein 4

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15112 SLC25A27, UCP4; solute carrier family 25 (mitochondrial uncoupling protein), member 27

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219728.1 False 1229 mRNA 0.46 10 18833395 18840324
XM_043219729.1 True 1282 mRNA 0.46 10 18833395 18835673

Neighbor

gene id symbol gene type direction distance location
ptrhd1 ptrhd1 coding downstream 1822 18830424 ~ 18831573 (-)
rpl7l1 rpl7l1,LOC107689455,LOC107690050 coding downstream 48797 18781603 ~ 18784598 (-)
slc5a6a slc5a6,slc5a6a,LOC107553475,LOC107689456,LOC107690043,LOC107601523 coding downstream 53688 18766159 ~ 18779707 (-)
enah enah,LOC107732530,LOC107601525,LOC107732354 coding downstream 99889 18680893 ~ 18733506 (-)
lbr LOC107732420,LOC107553478,LOC107698344,LOC107601526,LOC107732539,LOC107690042 coding downstream 153692 18670952 ~ 18679703 (-)
txlnba LOC107689450,LOC107710955,LOC107675104,LOC107558940,LOC107553470,LOC107727608 coding upstream 6071 18846395 ~ 18864036 (-)
cited2 cited2,LOC107558941,LOC107727673,LOC107689449,LOC107553469 coding upstream 31341 18871665 ~ 18874009 (-)
nmbr nmbr,LOC107553439,LOC107727594,LOC107689462,LOC107675069,LOC107717045,LOC107558933 coding upstream 160519 19000843 ~ 19010179 (-)
trnaf-gaa_119 NA coding upstream 235722 19076046 ~ 19076118 (-)
si:ch211-202p1.5 LOC107689457,LOC107727565,LOC107717067,LOC107675103,LOC107558944,LOC107553437 coding upstream 242221 19082545 ~ 19087185 (-)
G139823 NA non-coding downstream 3596 18824880 ~ 18829799 (-)
G139801 NA non-coding downstream 162462 18669438 ~ 18670933 (-)
G139798 cnih3,LOC106527994,LOC108248696,LOC106607867,LOC107095392,LOC107732540,LOC107601529 non-coding downstream 198729 18627307 ~ 18634666 (-)
G139790 NA non-coding downstream 234483 18598694 ~ 18598912 (-)
LOC122324299 NA non-coding downstream 381263 18449944 ~ 18452132 (-)
G139871 NA non-coding upstream 200466 19040790 ~ 19043914 (-)
G139903 NA non-coding upstream 319514 19159838 ~ 19160157 (-)
G139940 NA non-coding upstream 384056 19224380 ~ 19250790 (-)
G140152 NA non-coding upstream 494755 19335079 ~ 19341060 (-)
G140175 NA non-coding upstream 605504 19445828 ~ 19448712 (-)
G139706 LOC107683600,LOC107601464 other downstream 386446 18406027 ~ 18446949 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other downstream 483273 18343463 ~ 18350122 (-)
swt1 swt1,LOC107698376,LOC107732364,LOC107696141,LOC107726449 other downstream 1009194 17801402 ~ 17824201 (-)
erh erh,ERH,LOC107580641,LOC105904210,LOC100699790,LOC106607637,LOC101174968 other downstream 1405272 17346806 ~ 17428123 (-)
G139030 LOC107732636,LOC107693214,LOC107549128,LOC107726455,LOC107601514,LOC107696115 other downstream 2371179 16455468 ~ 16462216 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other upstream 414410 19254734 ~ 19256272 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other upstream 421142 19261466 ~ 19262952 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other upstream 457910 19298234 ~ 19303968 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other upstream 761208 19601532 ~ 19615202 (-)
G140227 cad other upstream 1217300 20057624 ~ 20059603 (-)

Expression


Co-expression Network