LOC122324950 (LOC107667618,LOC107600078,LOC107750074,LOC107603106,LOC107726759)


Basic Information

Item Value
gene id LOC122324950
gene name LOC107667618,LOC107600078,LOC107750074,LOC107603106,LOC107726759
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22498745 ~ 22505802 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219740.1
CCATGACTTCAAATGTCTCCGCGGGGCAATGCCCAGTTAATGTTTCGCTATGCGCGGAGTTGCCATGGTTTCCGGAGCGGCATAATGaaatgaaaactAAGTCAAAAGACATAGCATCCCAACCTCAGAGGGTTTTATGACGTCGGGGGTCGTGTCAGCCTAATCTGGTCATCCTTGAGTGGAGCCTCACTCTGGCCAATAGGATTAGAGAGTGAGGGAAGAGGCTTTACCTATTCTTGGAGTATGTGATGGCAGTCTTCTCCTACTGAAGCACAGAGTTACATCTATCTCTCGATTCTGACCGTAAACTTTTTCTGTATGACCAGGAACATTATTTTCCTTTCCATTGGAGAAACCGAACCAAGCATGGAGCTGGGAAAAGCCAAGCTTCTAAGAACAGGGTTGAATACCCTGCACCAAGCCATTCACCCGGTGCACGGAATAGCCTGGACGGACGGTAAGCAGGTTTGTCTCACGTCCTTGTATTCTGTCGAGGGTGAGCCCAAATTTGGCGACACCAATGTCATAGGACAGTTTGAACACGTCTTGGGACTCTTCTGGGGGCCGCTGTGCTGCTCTGGTTCCCCGGCGTTGCTTGCCGTCCAGCATAAAAAGCATGTCACGGTTTGGCAACTTCAGCTGAGCGCTTTAGAGCAGAACAAACTCCTCTGCACGCAGACCTGCGAAATGAGCGAGCCATTCCCGCTGCTGTCCCTGGGATGCGTCTGGCATCCCAAAATGGACATTTTAGCCATTTTGACTAAGCGAGACGCCTCAGTCTTGTTTTCCGTGCGGGTCGATAATCGTCGCGTGAAGGCCGAGATCAAGGGCAGCGGTCTGATCCATTGTGCCTGCTGGACTAAAGACGGAAACCGCCTGGTGGTTGCCATCGGAAGCTCATTGCACTCGTATATTTGGAACGACATCCAAAAAAGCCTGGTGGCGTGTTCCTTCTGCCCTATTTTTGATGTGGGTGGGTATATCTGTGCCATCGAGTCCACCAACGAGGCTCAAGTGGCTGTAGCGACTGAACTACCGCTTGATAAAATTTGCGGGCTCAACGCAGGCATCGCGTTCGACCTGCCTAACGAGTCAGAGGCTTCGACGTGCCGCCCTTCTCCCGTTTTGACAGTGGATGCGGACTATTATTTGGACAGACGGAGATCATGTGATTCCGAGCGCTCTGGACACGCCTCCTCATCCGGACCAATAGATCTAACGCACATTCTTGCCAAACACCGAAAATCTGATCCAAGTCCACTCATTCACTTGAGGCGGCGGGATAATGTGACGGGAACGGGTCAGGACTCGTCACATCTGATTCTGGTGACTTATGAGCGCAAAGTCACCACTACGAGGAAGGTGAGCATACCTGGCATCTTGGTCCCTGACATTATCGCCTTCGATCCAAGCGGCAGTACGGTTGCCGTTGCGTCCAACACATGCAACATGATCCTAGTTTACTGTATCACGGAATCTTCCATGCCTAATGTGCAACAGATCCAGCTACAAAAAAATGAGAGGCCCAAAGGGGTGTGCTTTTTCACCAACAAGATGTTGCTCTTCATGATTGGCCGGCAGAAGTCCAATGATCCTGCTTTCCTCCCCTCCTCCAACACAGACAAGTACATCTTGAGGCTAATAGCCAAGGAGCTGGTATTTGATGAGGAAGGTGCCACCCCAGCGGTTCCCAAGCCCGAGTCGGCTAGCCAACATCATGGGATTAGACGTCATTCTGAGAACTTTTCTAAAGAGGACCGTCTATCAATTAAGGATCTAATACTTCCCGGAGGCTCGGTAATTATTTCACCATCCAGTCGGAGGAAACTAGTCGAGGAGGTACGCAGCTCAGATTTGAGCCCCGTGGCAAGCTCTGCCGACTTCTCGGATAGAGCATCCAGTGCCTCTTCTGTTACTCTGGAAACCTACGACATGGATCACATCAGCCGCATGACCACGCTTGCCGTAGCTGGTCAGGCCAGCCGGGATTCAAGTCGACCCTGTTCACCAAGGTACGAGGCCTCAGAAAAAGTATACTCCGATGCCACTCCGCCAAAGAACAGTTGTCAGTCCAAAGAGAAGAACCTGGAGCAGCTGACGCAGAACATGGAGAGAATTTTCACCCGATTTGCTGATGTCCAGCAGTGCCTCGCAGAAATCAGAGACTTCACCCAGAACGGCAAAAAGATTGCATGCAGTTATCCTTCTGCTTATGAACCGCAATATGTGCACATTACGTGTCAGAAACAGTTGTCTGAGAATGTGTATACGGACGAGAGAAGGCCGCTGTTGCTGTGCGGAGGACGGATCTGCCTGCAAGTGATGCAGGAACTCTTCGGCCTGACAGTCATAGAGATGATGCATGGTCCCATGTGGATCGTCTTGGTGGCTGACGCCGATGGTTTCGTTCCGctcacatttaaacacaaagaCGAGCTCACAATCAGGAGCGCAAGAAGGAAATCCCCTATGAGACCCCAGAGTTGCGCCGACGTGTTTCCCCCTGAGAGTCCAGTGGCAGAAAAATGAAGCCTGTGTCATATCAAGAGGActcattagaaatatttttttttatgatatttgtcTTGTTAGCTGGATATCTGTGGCTAACACGGGGATAATCCAAACTCTCAGTTTGGAATTCAGGAAAACGTCTTGCTGACATATTTGCCactgtgatatatatattggaTATTTATAGGTATATGCAATGTGAAAGTTGTCAAGGGTAgaacagttttttaattttcagaagaAATACTTGAGTGCCTGCTTGATTACTTTTGCTTAAATAGGTTCTattttgtcacacacacacaaaaaaaccgAAGGAAcatgtaatgtaaaattaaagaaGATTCatagtgtttgtatttttgtatgtttcatcaTTGAAGGAGAGAGTAACATATTGCATGTCATTCTGATTCCATAACAGCACGTTgcttaaatttaacttaaattgaATTGGTATAAAAACTCAATGTATTGTCTTGTAAAGCATTCATCTTC
>XM_043219741.1
CCATGACTTCAAATGTCTCCGCGGGGCAATGCCCAGTTAATGTTTCGCTATGCGCGGAGTTGCCATGGTTTCCGGAGCGGCATAATGaaatgaaaactAAGTCAAAAGACATAGCATCCCAACCTCAGAGGGTTTTATGACGTCGGGGGTCGTGTCAGCCTAATCTGGTCATCCTTGAGTGGAGCCTCACTCTGGCCAATAGGATTAGAGAGTGAGGGAAGAGGCTTTACCTATTCTTGGAGAACATTATTTTCCTTTCCATTGGAGAAACCGAACCAAGCATGGAGCTGGGAAAAGCCAAGCTTCTAAGAACAGGGTTGAATACCCTGCACCAAGCCATTCACCCGGTGCACGGAATAGCCTGGACGGACGGTAAGCAGGTTTGTCTCACGTCCTTGTATTCTGTCGAGGGTGAGCCCAAATTTGGCGACACCAATGTCATAGGACAGTTTGAACACGTCTTGGGACTCTTCTGGGGGCCGCTGTGCTGCTCTGGTTCCCCGGCGTTGCTTGCCGTCCAGCATAAAAAGCATGTCACGGTTTGGCAACTTCAGCTGAGCGCTTTAGAGCAGAACAAACTCCTCTGCACGCAGACCTGCGAAATGAGCGAGCCATTCCCGCTGCTGTCCCTGGGATGCGTCTGGCATCCCAAAATGGACATTTTAGCCATTTTGACTAAGCGAGACGCCTCAGTCTTGTTTTCCGTGCGGGTCGATAATCGTCGCGTGAAGGCCGAGATCAAGGGCAGCGGTCTGATCCATTGTGCCTGCTGGACTAAAGACGGAAACCGCCTGGTGGTTGCCATCGGAAGCTCATTGCACTCGTATATTTGGAACGACATCCAAAAAAGCCTGGTGGCGTGTTCCTTCTGCCCTATTTTTGATGTGGGTGGGTATATCTGTGCCATCGAGTCCACCAACGAGGCTCAAGTGGCTGTAGCGACTGAACTACCGCTTGATAAAATTTGCGGGCTCAACGCAGGCATCGCGTTCGACCTGCCTAACGAGTCAGAGGCTTCGACGTGCCGCCCTTCTCCCGTTTTGACAGTGGATGCGGACTATTATTTGGACAGACGGAGATCATGTGATTCCGAGCGCTCTGGACACGCCTCCTCATCCGGACCAATAGATCTAACGCACATTCTTGCCAAACACCGAAAATCTGATCCAAGTCCACTCATTCACTTGAGGCGGCGGGATAATGTGACGGGAACGGGTCAGGACTCGTCACATCTGATTCTGGTGACTTATGAGCGCAAAGTCACCACTACGAGGAAGGTGAGCATACCTGGCATCTTGGTCCCTGACATTATCGCCTTCGATCCAAGCGGCAGTACGGTTGCCGTTGCGTCCAACACATGCAACATGATCCTAGTTTACTGTATCACGGAATCTTCCATGCCTAATGTGCAACAGATCCAGCTACAAAAAAATGAGAGGCCCAAAGGGGTGTGCTTTTTCACCAACAAGATGTTGCTCTTCATGATTGGCCGGCAGAAGTCCAATGATCCTGCTTTCCTCCCCTCCTCCAACACAGACAAGTACATCTTGAGGCTAATAGCCAAGGAGCTGGTATTTGATGAGGAAGGTGCCACCCCAGCGGTTCCCAAGCCCGAGTCGGCTAGCCAACATCATGGGATTAGACGTCATTCTGAGAACTTTTCTAAAGAGGACCGTCTATCAATTAAGGATCTAATACTTCCCGGAGGCTCGGTAATTATTTCACCATCCAGTCGGAGGAAACTAGTCGAGGAGGTACGCAGCTCAGATTTGAGCCCCGTGGCAAGCTCTGCCGACTTCTCGGATAGAGCATCCAGTGCCTCTTCTGTTACTCTGGAAACCTACGACATGGATCACATCAGCCGCATGACCACGCTTGCCGTAGCTGGTCAGGCCAGCCGGGATTCAAGTCGACCCTGTTCACCAAGGTACGAGGCCTCAGAAAAAGTATACTCCGATGCCACTCCGCCAAAGAACAGTTGTCAGTCCAAAGAGAAGAACCTGGAGCAGCTGACGCAGAACATGGAGAGAATTTTCACCCGATTTGCTGATGTCCAGCAGTGCCTCGCAGAAATCAGAGACTTCACCCAGAACGGCAAAAAGATTGCATGCAGTTATCCTTCTGCTTATGAACCGCAATATGTGCACATTACGTGTCAGAAACAGTTGTCTGAGAATGTGTATACGGACGAGAGAAGGCCGCTGTTGCTGTGCGGAGGACGGATCTGCCTGCAAGTGATGCAGGAACTCTTCGGCCTGACAGTCATAGAGATGATGCATGGTCCCATGTGGATCGTCTTGGTGGCTGACGCCGATGGTTTCGTTCCGctcacatttaaacacaaagaCGAGCTCACAATCAGGAGCGCAAGAAGGAAATCCCCTATGAGACCCCAGAGTTGCGCCGACGTGTTTCCCCCTGAGAGTCCAGTGGCAGAAAAATGAAGCCTGTGTCATATCAAGAGGActcattagaaatatttttttttatgatatttgtcTTGTTAGCTGGATATCTGTGGCTAACACGGGGATAATCCAAACTCTCAGTTTGGAATTCAGGAAAACGTCTTGCTGACATATTTGCCactgtgatatatatattggaTATTTATAGGTATATGCAATGTGAAAGTTGTCAAGGGTAgaacagttttttaattttcagaagaAATACTTGAGTGCCTGCTTGATTACTTTTGCTTAAATAGGTTCTattttgtcacacacacacaaaaaaaccgAAGGAAcatgtaatgtaaaattaaagaaGATTCatagtgtttgtatttttgtatgtttcatcaTTGAAGGAGAGAGTAACATATTGCATGTCATTCTGATTCCATAACAGCACGTTgcttaaatttaacttaaattgaATTGGTATAAAAACTCAATGTATTGTCTTGTAAAGCATTCATCTTC

Function

NR:

description
PREDICTED: WD repeat and coiled-coil-containing protein C2orf44 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219740.1 True 3012 mRNA 0.48 4 22498745 22505802
XM_043219741.1 False 2927 mRNA 0.48 5 22498745 22505802

Neighbor

gene id symbol gene type direction distance location
atad2b atad2b,LOC107697175,LOC107667607,LOC107750077,LOC107742719,LOC107603081 coding downstream 28475 22394835 ~ 22470270 (-)
gzf1 LOC107667619,LOC107600081,LOC107593244,LOC107742706,LOC107756665,LOC107697078 coding downstream 401540 22092072 ~ 22097205 (-)
chgb LOC107593248,LOC107667615,LOC107756670,LOC107742709 coding downstream 439919 22053057 ~ 22058826 (-)
bmp2b bmp2b,LOC107742710,LOC107685371,LOC107593250 coding downstream 492497 22001213 ~ 22006248 (-)
LOC122325511 taar12f,taar12e,LOC107706946,LOC107550397,LOC107550396,LOC107697103,LOC107721014 coding downstream 562286 21935374 ~ 21936459 (-)
opn8b opn8b,LOC107678833,LOC107726744,LOC107549692,LOC107603078,LOC107603079 coding upstream 35975 22541777 ~ 22552274 (-)
opn8a opn8a,LOC107678826,LOC107726748,LOC107549662,LOC107743142 coding upstream 51702 22557504 ~ 22567131 (-)
clic5b clic5b,LOC107678823,LOC107603103,LOC107697168,LOC107549663,LOC107726746 coding upstream 164240 22670042 ~ 22683646 (-)
lin9 lin9,LOC107726751,LOC107678835,LOC107697095,LOC107743312 coding upstream 264117 22769919 ~ 22776432 (-)
parp1 parp1,LOC107678834,LOC107697162 coding upstream 271319 22777121 ~ 22791942 (-)
trnal-uaa_37 NA non-coding downstream 382956 22115707 ~ 22115789 (-)
trnal-uaa_36 NA non-coding downstream 383625 22115038 ~ 22115120 (-)
G140971 NA non-coding downstream 386320 22112160 ~ 22112425 (-)
G140970 NA non-coding downstream 387876 22110663 ~ 22110869 (-)
G140969 NA non-coding downstream 392464 22105969 ~ 22106281 (-)
G141078 NA non-coding upstream 33565 22539367 ~ 22539567 (-)
G141079 NA non-coding upstream 33791 22539593 ~ 22539914 (-)
G141080 NA non-coding upstream 34118 22539920 ~ 22540327 (-)
G141082 NA non-coding upstream 34886 22540688 ~ 22541150 (-)
G141083 NA non-coding upstream 35661 22541463 ~ 22541694 (-)
G140972 NA other downstream 385701 22112602 ~ 22113044 (-)
LOC122325102 taar14e,si:dkey-246e3.4,LOC107550386,LOC107719394,LOC107550373,LOC107593252,LOC107719391,LOC107719426,LOC107697114 other downstream 651828 21845214 ~ 21846917 (-)
LOC122324884 LOC107550373,LOC107719391,LOC107719393,LOC107719392,LOC107742734,LOC107593252,LOC107579143,LOC107550386,LOC107719394 other downstream 654112 21842432 ~ 21844633 (-)
G140883 NA other downstream 657277 21841113 ~ 21841468 (-)
batf batf,LOC107697118 other downstream 757668 21732544 ~ 21741077 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other upstream 878769 23384571 ~ 23401391 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other upstream 1279950 23785752 ~ 23823050 (-)
G141502 NA other upstream 1498885 24004687 ~ 24006665 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other upstream 1748591 24254393 ~ 24517743 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other upstream 2018267 24524069 ~ 24532363 (-)

Expression


Co-expression Network