mfsd2b (si:dkeyp-115a10.3,mfsd2b,LOC107750078,LOC107697177,LOC107603080,LOC107667608)


Basic Information

Item Value
gene id mfsd2b
gene name si:dkeyp-115a10.3,mfsd2b,LOC107750078,LOC107697177,LOC107603080,LOC107667608
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22478061 ~ 22498608 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219742.1
TCTATTGAACGGGGTGCTGCTGCAGTGAATGTGAATGTGACTGATGGAATGAACCCGCAGTTCATCCACCGCTGCAGCACTTGATAGCTCTCCGCATCACTCAGAGAGAggcatctgattggctggcatcCGTGAGCGACAGCTGGAGAGCAGCCGCGCGTGTGGCCTCCGTGGCTGTGTAACCCTGCCCATCCTCTCACTGCTGCAGTATGTGAATGGACGCAGGCACAGCTGTAGCCAGCTCTGAGAAGCCAGAGAGTTCAGCTGCTGCCTCTGTACCCCTCGCACCGGCTGCCATGGCCAAGGGGGAGAAAGCCCGGGTCACATCGGGGGACAAACTCACCATGAAGCACCCCGAACCCGCTTTCACCAAGATGCCACCGCAGACTCATCTAGATCAGAAGCTTTCCGTATGCAGCAAACTCTGTTTTGCAATCGGAGGTGCGCCGAATCAGGTCGCCGGCAGCGCAACAGCGTTCTTCCTTCAAATATACCTACTTGACATTGCACAGATTAACCCATTCCAGGCCTCCATGGTGTTGTTTGTCGGCAAGGCTTGGGGGGCAGTCACTGACCCTATTGTCGGATTCTTCATTACTAAAAGCAAATGGACGAAGATTGGGCGACTCATGCCGTGGATGGTGGGCTGCACTCCGTTCATGGTGGTCTCTTACTTCTACCTTTGGTTTGTCCCACCTTTTACCAATGGGAGGTTCATGTGGTATCTGGGCTTCTACTGTCTCTACCAAACTCTCATCACATGTTTCCATGTGCCTTATTCCGCCCTGACCATGTTCTTGAGCACCGACCAGCGGGAGAGAGACTCTGCTACAGCTTACCGTATGACGGTGGAGGTGCTCGGGACGCTGGTGGGTGCCGCCATTCAAGGTCAGATCGTAGCGAGCGCGCACACTCTGAAGCACTGTCCTTATCGAAACCTGACCGCTGGTCACCTGGGAAACAGCAGTGGCACAGAGGTCATCAGATCCCTGGCCCTGTCTCAGGACTTCCTGTCCCACGCTAAGGAAGTGTACATGATAGCTGCCGGAGTGATCGGTGGGCTGTTTCTGGTTTGTACGGTGGTCATGTTCCTGGGAGTCAAAGAGAGAGATGATCCCTACGCTCCTAAAACAGACAAGGCCATTCCTTTCCACAAGGGCTTTATTTTGGTCATGAAGCACGGGTCCTACCTCACTCTGACGGCGGCTTTCCTGTTCATATCCGTGGCCATCCAGTTGATACAAAGTAACTTTGTGCTGTTCTGCACATACGCGGTGGAGCTGCGAGAACACTTTCAGAACATCGTTTTGACAATTCTGATGTCGGCCGCAGTGAGCATCCCGTTCTGGCAGTGGTTCCTTGAGAGGTTCGGGAAGAAAACAGCAGCTTTCTGCGGCATTACCTGGATCATGCCGTTCACGGTGATGCTGGTCTTCATCCCTAATCTGATAGTGGCATATGTCGTGGCCGTATCATCCGGGCTTAGTGTAGCCGCTTCTCTCttgttaccatgGTCAATGTTACCAGATGTAGTGGATGACTTCAGACTGGCGAACCGCAACTCTAAAGGACACGAGGCGATCTTCTACTCCCTATACGCTTTCTTCACTAAGTTCGCCGCGGGCATCTCTCTCGGAGTGTCTACGCTTTGCCTACAGTTTGCTGGTTATGACACAGGCGCTTGCAGACAGCCTCTTCCAGTGGTCTATACGCTCAAACTGCTCATCGGCGCCGCTCCGGTGGCCTGTATCACCACAGGCCTCATGATCCTCGTGGTGTACCCGATCAGCGAGGACGTCAGATTACGAAACAAACTGGCCCTGGAGGAGCTCAGAAGCCAGAGTATTACCTGCAAATCTCTCCGAGCCGAGCTGAGCAGCGTATGACGTCTTCAAACAGCCGATCCTGATATTCTAGCCCAGCGCTGGGATGAGTCGTGTTAGTGTATATTACACTGTGTGACGtatataatgttttactgtaaacatTTCAGTTCGTTTTCGGTATTCAGTCTGTTTCAACATAACATATAGCCACATATACGATATTACAATATCTAATTTATACACATGAATGGACTATACATCATTATATATATCAGGATTTCCTGAGGGAAAATGTATTGATAATATATTAAGTTGTATTAGCGATCATAAATATTAGTGAATGACTTGATTCATAAATATTGTGCTGGTTCACGCTGGTTCAGCTTATTATGATgatgctttaataaatataaaattacaataaaaatattgaatgttATTTGGATGAA
>XM_043219743.1
AGGGGGCGCGCGCGTGTGTTTGTAATTCCATCTATTGAACGGGGTGCTGCTGCAGTGAATGTGAATGTGACTGATGGAATGAACCCGCAGTTCATCCACCGCTGCAGCACTTGATAGCTCTCCGCATCACTCAGggGTTTCAGTGTCAGTGTCACTGCACAGTGTCAGATTCAGGTAAGCAGCTTGTTTTGGCAGAGAGAggcatctgattggctggcatcCGTGAGCGACAGCTGGAGAGCAGCCGCGCGTGTGGCCTCCGTGGCTGTGTAACCCTGCCCATCCTCTCACTGCTGCAGTATGTGAATGGACGCAGGCACAGCTGTAGCCAGCTCTGAGAAGCCAGAGAGTTCAGCTGCTGCCTCTGTACCCCTCGCACCGGCTGCCATGGCCAAGGGGGAGAAAGCCCGGGTCACATCGGGGGACAAACTCACCATGAAGCACCCCGAACCCGCTTTCACCAAGATGCCACCGCAGACTCATCTAGATCAGAAGCTTTCCGTATGCAGCAAACTCTGTTTTGCAATCGGAGGTGCGCCGAATCAGGTCGCCGGCAGCGCAACAGCGTTCTTCCTTCAAATATACCTACTTGACATTGCACAGATTAACCCATTCCAGGCCTCCATGGTGTTGTTTGTCGGCAAGGCTTGGGGGGCAGTCACTGACCCTATTGTCGGATTCTTCATTACTAAAAGCAAATGGACGAAGATTGGGCGACTCATGCCGTGGATGGTGGGCTGCACTCCGTTCATGGTGGTCTCTTACTTCTACCTTTGGTTTGTCCCACCTTTTACCAATGGGAGGTTCATGTGGTATCTGGGCTTCTACTGTCTCTACCAAACTCTCATCACATGTTTCCATGTGCCTTATTCCGCCCTGACCATGTTCTTGAGCACCGACCAGCGGGAGAGAGACTCTGCTACAGCTTACCGTATGACGGTGGAGGTGCTCGGGACGCTGGTGGGTGCCGCCATTCAAGGTCAGATCGTAGCGAGCGCGCACACTCTGAAGCACTGTCCTTATCGAAACCTGACCGCTGGTCACCTGGGAAACAGCAGTGGCACAGAGGTCATCAGATCCCTGGCCCTGTCTCAGGACTTCCTGTCCCACGCTAAGGAAGTGTACATGATAGCTGCCGGAGTGATCGGTGGGCTGTTTCTGGTTTGTACGGTGGTCATGTTCCTGGGAGTCAAAGAGAGAGATGATCCCTACGCTCCTAAAACAGACAAGGCCATTCCTTTCCACAAGGGCTTTATTTTGGTCATGAAGCACGGGTCCTACCTCACTCTGACGGCGGCTTTCCTGTTCATATCCGTGGCCATCCAGTTGATACAAAGTAACTTTGTGCTGTTCTGCACATACGCGGTGGAGCTGCGAGAACACTTTCAGAACATCGTTTTGACAATTCTGATGTCGGCCGCAGTGAGCATCCCGTTCTGGCAGTGGTTCCTTGAGAGGTTCGGGAAGAAAACAGCAGCTTTCTGCGGCATTACCTGGATCATGCCGTTCACGGTGATGCTGGTCTTCATCCCTAATCTGATAGTGGCATATGTCGTGGCCGTATCATCCGGGCTTAGTGTAGCCGCTTCTCTCttgttaccatgGTCAATGTTACCAGATGTAGTGGATGACTTCAGACTGGCGAACCGCAACTCTAAAGGACACGAGGCGATCTTCTACTCCCTATACGCTTTCTTCACTAAGTTCGCCGCGGGCATCTCTCTCGGAGTGTCTACGCTTTGCCTACAGTTTGCTGGTTATGACACAGGCGCTTGCAGACAGCCTCTTCCAGTGGTCTATACGCTCAAACTGCTCATCGGCGCCGCTCCGGTGGCCTGTATCACCACAGGCCTCATGATCCTCGTGGTGTACCCGATCAGCGAGGACGTCAGATTACGAAACAAACTGGCCCTGGAGGAGCTCAGAAGCCAGAGTATTACCTGCAAATCTCTCCGAGCCGAGCTGAGCAGCGTATGACGTCTTCAAACAGCCGATCCTGATATTCTAGCCCAGCGCTGGGATGAGTCGTGTTAGTGTATATTACACTGTGTGACGtatataatgttttactgtaaacatTTCAGTTCGTTTTCGGTATTCAGTCTGTTTCAACATAACATATAGCCACATATACGATATTACAATATCTAATTTATACACATGAATGGACTATACATCATTATATATATCAGGATTTCCTGAGGGAAAATGTATTGATAATATATTAAGTTGTATTAGCGATCATAAATATTAGTGAATGACTTGATTCATAAATATTGTGCTGGTTCACGCTGGTTCAGCTTATTATGATgatgctttaataaatataaaattacaataaaaatattgaatgttATTTGGATGAA
>XM_043219744.1
AGTTCATCCACCGCTGCAGCACTTGATAGCTCTCCGCATCACTCAGCTTGTTTTGGCAGAGAGAggcatctgattggctggcatcCGTGAGCGACAGCTGGAGAGCAGCCGCGCGTGTGGCCTCCGTGGCTGTGTAACCCTGCCCATCCTCTCACTGCTGCAGTATGTGAATGGACGCAGGCACAGCTGTAGCCAGCTCTGAGAAGCCAGAGAGTTCAGCTGCTGCCTCTGTACCCCTCGCACCGGCTGCCATGGCCAAGGGGGAGAAAGCCCGGGTCACATCGGGGGACAAACTCACCATGAAGCACCCCGAACCCGCTTTCACCAAGATGCCACCGCAGACTCATCTAGATCAGAAGCTTTCCGTATGCAGCAAACTCTGTTTTGCAATCGGAGGTGCGCCGAATCAGGTCGCCGGCAGCGCAACAGCGTTCTTCCTTCAAATATACCTACTTGACATTGCACAGATTAACCCATTCCAGGCCTCCATGGTGTTGTTTGTCGGCAAGGCTTGGGGGGCAGTCACTGACCCTATTGTCGGATTCTTCATTACTAAAAGCAAATGGACGAAGATTGGGCGACTCATGCCGTGGATGGTGGGCTGCACTCCGTTCATGGTGGTCTCTTACTTCTACCTTTGGTTTGTCCCACCTTTTACCAATGGGAGGTTCATGTGGTATCTGGGCTTCTACTGTCTCTACCAAACTCTCATCACATGTTTCCATGTGCCTTATTCCGCCCTGACCATGTTCTTGAGCACCGACCAGCGGGAGAGAGACTCTGCTACAGCTTACCGTATGACGGTGGAGGTGCTCGGGACGCTGGTGGGTGCCGCCATTCAAGGTCAGATCGTAGCGAGCGCGCACACTCTGAAGCACTGTCCTTATCGAAACCTGACCGCTGGTCACCTGGGAAACAGCAGTGGCACAGAGGTCATCAGATCCCTGGCCCTGTCTCAGGACTTCCTGTCCCACGCTAAGGAAGTGTACATGATAGCTGCCGGAGTGATCGGTGGGCTGTTTCTGGTTTGTACGGTGGTCATGTTCCTGGGAGTCAAAGAGAGAGATGATCCCTACGCTCCTAAAACAGACAAGGCCATTCCTTTCCACAAGGGCTTTATTTTGGTCATGAAGCACGGGTCCTACCTCACTCTGACGGCGGCTTTCCTGTTCATATCCGTGGCCATCCAGTTGATACAAAGTAACTTTGTGCTGTTCTGCACATACGCGGTGGAGCTGCGAGAACACTTTCAGAACATCGTTTTGACAATTCTGATGTCGGCCGCAGTGAGCATCCCGTTCTGGCAGTGGTTCCTTGAGAGGTTCGGGAAGAAAACAGCAGCTTTCTGCGGCATTACCTGGATCATGCCGTTCACGGTGATGCTGGTCTTCATCCCTAATCTGATAGTGGCATATGTCGTGGCCGTATCATCCGGGCTTAGTGTAGCCGCTTCTCTCttgttaccatgGTCAATGTTACCAGATGTAGTGGATGACTTCAGACTGGCGAACCGCAACTCTAAAGGACACGAGGCGATCTTCTACTCCCTATACGCTTTCTTCACTAAGTTCGCCGCGGGCATCTCTCTCGGAGTGTCTACGCTTTGCCTACAGTTTGCTGGTTATGACACAGGCGCTTGCAGACAGCCTCTTCCAGTGGTCTATACGCTCAAACTGCTCATCGGCGCCGCTCCGGTGGCCTGTATCACCACAGGCCTCATGATCCTCGTGGTGTACCCGATCAGCGAGGACGTCAGATTACGAAACAAACTGGCCCTGGAGGAGCTCAGAAGCCAGAGTATTACCTGCAAATCTCTCCGAGCCGAGCTGAGCAGCGTATGACGTCTTCAAACAGCCGATCCTGATATTCTAGCCCAGCGCTGGGATGAGTCGTGTTAGTGTATATTACACTGTGTGACGtatataatgttttactgtaaacatTTCAGTTCGTTTTCGGTATTCAGTCTGTTTCAACATAACATATAGCCACATATACGATATTACAATATCTAATTTATACACATGAATGGACTATACATCATTATATATATCAGGATTTCCTGAGGGAAAATGTATTGATAATATATTAAGTTGTATTAGCGATCATAAATATTAGTGAATGACTTGATTCATAAATATTGTGCTGGTTCACGCTGGTTCAGCTTATTATGATgatgctttaataaatataaaattacaataaaaatattgaatgttATTTGGATGAA
>XM_043219745.1
TGACTGATGGAATGAACCCGCAGTTCATCCACCGCTGCAGCACTTGATAGCTCTCCGCATCACTCAGTATGTGAATGGACGCAGGCACAGCTGTAGCCAGCTCTGAGAAGCCAGAGAGTTCAGCTGCTGCCTCTGTACCCCTCGCACCGGCTGCCATGGCCAAGGGGGAGAAAGCCCGGGTCACATCGGGGGACAAACTCACCATGAAGCACCCCGAACCCGCTTTCACCAAGATGCCACCGCAGACTCATCTAGATCAGAAGCTTTCCGTATGCAGCAAACTCTGTTTTGCAATCGGAGGTGCGCCGAATCAGGTCGCCGGCAGCGCAACAGCGTTCTTCCTTCAAATATACCTACTTGACATTGCACAGATTAACCCATTCCAGGCCTCCATGGTGTTGTTTGTCGGCAAGGCTTGGGGGGCAGTCACTGACCCTATTGTCGGATTCTTCATTACTAAAAGCAAATGGACGAAGATTGGGCGACTCATGCCGTGGATGGTGGGCTGCACTCCGTTCATGGTGGTCTCTTACTTCTACCTTTGGTTTGTCCCACCTTTTACCAATGGGAGGTTCATGTGGTATCTGGGCTTCTACTGTCTCTACCAAACTCTCATCACATGTTTCCATGTGCCTTATTCCGCCCTGACCATGTTCTTGAGCACCGACCAGCGGGAGAGAGACTCTGCTACAGCTTACCGTATGACGGTGGAGGTGCTCGGGACGCTGGTGGGTGCCGCCATTCAAGGTCAGATCGTAGCGAGCGCGCACACTCTGAAGCACTGTCCTTATCGAAACCTGACCGCTGGTCACCTGGGAAACAGCAGTGGCACAGAGGTCATCAGATCCCTGGCCCTGTCTCAGGACTTCCTGTCCCACGCTAAGGAAGTGTACATGATAGCTGCCGGAGTGATCGGTGGGCTGTTTCTGGTTTGTACGGTGGTCATGTTCCTGGGAGTCAAAGAGAGAGATGATCCCTACGCTCCTAAAACAGACAAGGCCATTCCTTTCCACAAGGGCTTTATTTTGGTCATGAAGCACGGGTCCTACCTCACTCTGACGGCGGCTTTCCTGTTCATATCCGTGGCCATCCAGTTGATACAAAGTAACTTTGTGCTGTTCTGCACATACGCGGTGGAGCTGCGAGAACACTTTCAGAACATCGTTTTGACAATTCTGATGTCGGCCGCAGTGAGCATCCCGTTCTGGCAGTGGTTCCTTGAGAGGTTCGGGAAGAAAACAGCAGCTTTCTGCGGCATTACCTGGATCATGCCGTTCACGGTGATGCTGGTCTTCATCCCTAATCTGATAGTGGCATATGTCGTGGCCGTATCATCCGGGCTTAGTGTAGCCGCTTCTCTCttgttaccatgGTCAATGTTACCAGATGTAGTGGATGACTTCAGACTGGCGAACCGCAACTCTAAAGGACACGAGGCGATCTTCTACTCCCTATACGCTTTCTTCACTAAGTTCGCCGCGGGCATCTCTCTCGGAGTGTCTACGCTTTGCCTACAGTTTGCTGGTTATGACACAGGCGCTTGCAGACAGCCTCTTCCAGTGGTCTATACGCTCAAACTGCTCATCGGCGCCGCTCCGGTGGCCTGTATCACCACAGGCCTCATGATCCTCGTGGTGTACCCGATCAGCGAGGACGTCAGATTACGAAACAAACTGGCCCTGGAGGAGCTCAGAAGCCAGAGTATTACCTGCAAATCTCTCCGAGCCGAGCTGAGCAGCGTATGACGTCTTCAAACAGCCGATCCTGATATTCTAGCCCAGCGCTGGGATGAGTCGTGTTAGTGTATATTACACTGTGTGACGtatataatgttttactgtaaacatTTCAGTTCGTTTTCGGTATTCAGTCTGTTTCAACATAACATATAGCCACATATACGATATTACAATATCTAATTTATACACATGAATGGACTATACATCATTATATATATCAGGATTTCCTGAGGGAAAATGTATTGATAATATATTAAGTTGTATTAGCGATCATAAATATTAGTGAATGACTTGATTCATAAATATTGTGCTGGTTCACGCTGGTTCAGCTTATTATGATgatgctttaataaatataaaattacaataaaaatattgaatgttATTTGGATGAA

Function

symbol description
mfsd2b Predicted to enable sphingolipid transporter activity. Predicted to be involved in organic substance transport. Predicted to act upstream of or within carbohydrate transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human MFSD2B (major facilitator superfamily domain containing 2B).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219742.1 False 2275 mRNA 0.50 15 22478091 22498608
XM_043219743.1 True 2366 mRNA 0.50 15 22478061 22498608
XM_043219744.1 False 2230 mRNA 0.50 15 22478149 22498608
XM_043219745.1 False 2134 mRNA 0.49 15 22478128 22498608

Neighbor

gene id symbol gene type direction distance location
LOC122325512 klhl29,LOC107667613,LOC107742703,LOC107697176 coding upstream 83627 22285647 ~ 22394434 (+)
trib2 trib2,LOC107742704,LOC107667617,LOC107717709,LOC107697179 coding upstream 319133 22150436 ~ 22158928 (+)
napbb si:rp71-81o21.2,napb,LOC107756672,LOC107667620,LOC107742707,LOC108411873,LOC107593246,LOC103023605,LOC106571745,LOC106610947,LOC100691502 coding upstream 386279 22085016 ~ 22091782 (+)
gpcpd1 gpcpd1,LOC107593247,LOC107742708,LOC107756671,LOC107697181 coding upstream 395444 22067984 ~ 22082617 (+)
trmt6 trmt6,LOC107667616,LOC107697184,LOC107593280 coding upstream 420847 22046439 ~ 22057214 (+)
mmut mut,LOC107726757,LOC107697172,LOC107726528,LOC107667609 coding downstream 19557 22518165 ~ 22537861 (+)
runx2b runx2b,runx2,LOC107678859,LOC107726745,LOC107697170,LOC107603075 coding downstream 123780 22622388 ~ 22662318 (+)
mark3b mark3b,LOC107697167,LOC107743287,LOC107678848,LOC108412004,LOC107726756 coding downstream 187964 22686572 ~ 22738127 (+)
laptm4a laptm4a,LOC107678852,LOC107726758,LOC107603102,LOC107743288 coding downstream 241025 22739633 ~ 22744277 (+)
ttc32 ttc32,LOC107678832,LOC107743292,LOC107697098 coding downstream 257384 22755992 ~ 22757979 (+)
LOC122324401 NA non-coding upstream 363194 22098405 ~ 22114867 (+)
G140933 NA non-coding upstream 376600 22101238 ~ 22101461 (+)
G140931 NA non-coding upstream 379769 22097911 ~ 22098292 (+)
G140922 NA non-coding upstream 416528 22061063 ~ 22061533 (+)
G140905 NA non-coding upstream 499513 21933984 ~ 21978548 (+)
G141081 NA non-coding downstream 42510 22541118 ~ 22541327 (+)
G141084 NA non-coding downstream 43528 22542136 ~ 22542532 (+)
G141091 NA non-coding downstream 58621 22557229 ~ 22557502 (+)
G141121 NA non-coding downstream 422085 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 567979 23066587 ~ 23073665 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 1287 22471761 ~ 22476774 (+)
G140785 NA other upstream 633360 21844146 ~ 21844701 (+)
ipo13b ipo13,LOC107745904,LOC107593276,LOC107697216,LOC107691006 other upstream 1276099 21168775 ~ 21201962 (+)
G140533 NA other upstream 1375551 21101768 ~ 21102510 (+)
LOC122324654 cox7a2b,LOC107745918,LOC107719436,LOC107704035,LOC107669441,LOC107548419 other upstream 1686358 20789876 ~ 20791703 (+)
fkbp1b fkbp1b other downstream 8119 22506727 ~ 22517683 (+)
matn3a matn3a other downstream 245804 22744412 ~ 22754161 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other downstream 344197 22842805 ~ 22860327 (+)
pln NA other downstream 845107 23343715 ~ 23351655 (+)
G141475 NA other downstream 1574263 24072871 ~ 24074423 (+)

Expression


Co-expression Network