Item | Value |
---|---|
gene id | XLOC_006777 |
gene name | srd5a2b |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007124.7 |
NCBI id | CM002897.2 |
chromosome length | 52186027 |
location | 35484229 ~ 35497586 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
srd5a2b | Predicted to enable 3-oxo-5-alpha-steroid 4-dehydrogenase activity. Predicted to be involved in steroid biosynthetic process. Predicted to act upstream of or within cell differentiation; sex differentiation; and steroid metabolic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Is expressed in hindbrain; pectoral fin; and testis. Human ortholog(s) of this gene implicated in hypospadias and prostate cancer. Orthologous to human SRD5A2 (steroid 5 alpha-reductase 2). |
id | name | namespace |
---|---|---|
GO:0006629 | lipid metabolic process | biological_process |
GO:0008202 | steroid metabolic process | biological_process |
GO:0006694 | steroid biosynthetic process | biological_process |
GO:0055114 | oxidation-reduction process | biological_process |
GO:0016020 | membrane | cellular_component |
GO:0016021 | integral component of membrane | cellular_component |
GO:0003865 | 3-oxo-5-alpha-steroid 4-dehydrogenase activity | molecular_function |
GO:0016491 | oxidoreductase activity | molecular_function |
GO:0047751 | cholestenone 5-alpha-reductase activity | molecular_function |
GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | molecular_function |
id | description |
---|---|
ZDB-GENE-050417-182 | Predicted to enable 3-oxo-5-alpha-steroid 4-dehydrogenase activity. Predicted to be involved in steroid biosynthetic process. Predicted to act upstream of or within cell differentiation; sex differentiation; and steroid metabolic process. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Is expressed in hindbrain; pectoral fin; and testis. Human ortholog(s) of this gene implicated in hypospadias and prostate cancer. Orthologous to human SRD5A2 (steroid 5 alpha-reductase 2). |
ensembl_id | ENSDARG00000039067 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00013042 | True | 1277 | mRNA | 0.43 | 4 | 35484229 | 35497586 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_006776 | slx4ip | coding | downstream | 11698 | 35391609 ~ 35472531 (-) |
XLOC_006775 | CU138575.1 | coding | downstream | 113545 | 35370569 ~ 35370684 (-) |
XLOC_006774 | NA | coding | downstream | 194792 | 35205297 ~ 35289437 (-) |
XLOC_006773 | CR932983.2 | coding | downstream | 289470 | 35182994 ~ 35194759 (-) |
XLOC_006772 | btbd3b | coding | downstream | 432332 | 35041892 ~ 35051897 (-) |
XLOC_006778 | memo1 | coding | upstream | 13307 | 35510893 ~ 35527697 (-) |
XLOC_006779 | BX663524.1 | coding | upstream | 94656 | 35592242 ~ 35592377 (-) |
XLOC_006780 | erlec1 | coding | upstream | 253104 | 35750690 ~ 35765028 (-) |
XLOC_006781 | map3k4 | coding | upstream | 290287 | 35787873 ~ 35844961 (-) |
XLOC_006782 | tacc3 | coding | upstream | 382987 | 35880573 ~ 35892305 (-) |
XLOC_006471 | BX537274.2 | misc | downstream | 25219324 | 10264741 ~ 10264905 (-) |
XLOC_006338 | rn7sk | misc | downstream | 34658004 | 825904 ~ 826225 (-) |
XLOC_006769 | BX649403.2 | non-coding | downstream | 839948 | 34644150 ~ 34644281 (-) |
XLOC_006768 | BX649403.1 | non-coding | downstream | 845483 | 34638629 ~ 34638746 (-) |
XLOC_006784 | NA | non-coding | upstream | 427456 | 35925042 ~ 35925484 (-) |
XLOC_006785 | BX510990.1 | non-coding | upstream | 464764 | 35962350 ~ 35962466 (-) |
XLOC_006797 | CR361558.1 | non-coding | upstream | 901674 | 36399260 ~ 36399375 (-) |
XLOC_006804 | BX927407.1 | non-coding | upstream | 1090184 | 36587770 ~ 36612159 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | CI01000012_05923216_05928055 | SRD5A2B | misc | CI01000012 | null | 5922385 ~ 5929186 (+) |