si:ch211-245h14.1


Basic Information

Item Value
gene id si:ch211-245h14.1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 19514080 ~ 19516523 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219788.1
GTATCAATTTAGTTTTAGCAACAATAACTTTCGCTTTCAATACACCAGAAATGAGCAGCGCGGGGTCTTCCTGGATTTCGTGGATGAATCCGAACAACTGGACGATCACCAAGGAAAAGAAGGGCAGGGCTCTTCGACAAAAAATCCATGAAATCTCTCAGTCTTCTGTCCTAGATGAGGCAGGCATTGAAGACGCTCAGATCCTTACTTTGACTAGAGAGGATCTGAACGAGCTTTTTCCTGGAATTAAGAACTTTCAGCTCAGAAGGACGGTTATGACACTAATAACAGGAACAATGAAGGATTCACTTAAACATGGCCCAGAAACATTGGCTGGTGCCATGAAgcatttaatgcacaaaaacGATGATGCTGCTGTACAGGAAGTCTTAAAGGAGTCTCTTCGAGCGTTTAAACAAATGGAGGATCAGCTTAAAGCAGCACAGGCTTCGTTGAAACCATACATTGAGGTCTTGACTAGTCTCTCCGAGGCACCTGCTAGACCAGAGGACTTGTCAAACAAGAGAACATTTCCAAACTCATTCCCAGCAGATACAAACTCTACAACTGTGCAGACTCGCAGGTTTGAGCCTTTGGTCAGAGTGCATCCATTTGTTTGTGGTCGAACCTTGGGAACGGACAAGCAAATTCTTTCCCTGCTCAGGGGAGTTAAAGAGACTAATTTATTGGACTGTCAGTTGATACTGGCCTTCAATCCTGTGACTTCACGAGCTGGAACTGACACAGAGGAAGCATTAAAGAAAATTCCAGCTGATAAACCAGCAGTACTGGTGACAATGCACCATACCTTCAACCCTGCCTACACATGCCCCAGTGTAAATACATCATCTCAATTGAACAATGTGGAACACGTTAATGTGCTCTTCCACGACTCTCATCACGGTCTTCTTAGGTGTCCAACAAATGAACATGCAATTGCCAAACTTCAGTCGGTCTTAAACCAATACATGTAAACAGTCTTGCTTCAAACGCTTTAACTGTCAATCACTGAAAATGACACTGCCATGTATTTATGCTGTATGATCATAtgagaagacaaaaacaacaagccagctaataaacaactaataaaCCGA
>XM_043219789.1
GTAAATACTGGATCGTATCAATTTAGTTTTAGCAACAATAACTTTCGCTTTCAATACACCAGAAATGAGCAGCGCGGGGTCTTCCTGGATTTCGTGGATGAATCCGAACAACTGGACGATCACCAAGGAAAAGGGCAGGGCTCTTCGACAAAAAATCCATGAAATCTCTCAGTCTTCTGTCCTAGATGAGGCAGGCATTGAAGACGCTCAGATCCTTACTTTGACTAGAGAGGATCTGAACGAGCTTTTTCCTGGAATTAAGAACTTTCAGCTCAGAAGGACGGTTATGACACTAATAACAGGAACAATGAAGGATTCACTTAAACATGGCCCAGAAACATTGGCTGGTGCCATGAAgcatttaatgcacaaaaacGATGATGCTGCTGTACAGGAAGTCTTAAAGGAGTCTCTTCGAGCGTTTAAACAAATGGAGGATCAGCTTAAAGCAGCACAGGCTTCGTTGAAACCATACATTGAGGTCTTGACTAGTCTCTCCGAGGCACCTGCTAGACCAGAGGACTTGTCAAACAAGAGAACATTTCCAAACTCATTCCCAGCAGATACAAACTCTACAACTGTGCAGACTCGCAGGTTTGAGCCTTTGGTCAGAGTGCATCCATTTGTTTGTGGTCGAACCTTGGGAACGGACAAGCAAATTCTTTCCCTGCTCAGGGGAGTTAAAGAGACTAATTTATTGGACTGTCAGTTGATACTGGCCTTCAATCCTGTGACTTCACGAGCTGGAACTGACACAGAGGAAGCATTAAAGAAAATTCCAGCTGATAAACCAGCAGTACTGGTGACAATGCACCATACCTTCAACCCTGCCTACACATGCCCCAGTGTAAATACATCATCTCAATTGAACAATGTGGAACACGTTAATGTGCTCTTCCACGACTCTCATCACGGTCTTCTTAGGTGTCCAACAAATGAACATGCAATTGCCAAACTTCAGTCGGTCTTAAACCAATACATGTAAACAGTCTTGCTTCAAACGCTTTAACTGTCAATCACTGAAAATGACACTGCCATGTATTTATGCTGTATGATCATAtgagaagacaaaaacaacaagccagctaataaacaactaataaaCCGA
>XM_043219790.1
TAGTTTTAGCAACAATAACTTTCGCTTTCAATACACCAGAAATGAGCAGCGCGGGGTCTTCCTGGATTTCGTGGATGAATCCGAACAACTGGACGATCACCAAGGAAAAGGATTCACTTAAACATGGCCCAGAAACATTGGCTGGTGCCATGAAgcatttaatgcacaaaaacGATGATGCTGCTGTACAGGAAGTCTTAAAGGAGTCTCTTCGAGCGTTTAAACAAATGGAGGATCAGCTTAAAGCAGCACAGGCTTCGTTGAAACCATACATTGAGGTCTTGACTAGTCTCTCCGAGGCACCTGCTAGACCAGAGGACTTGTCAAACAAGAGAACATTTCCAAACTCATTCCCAGCAGATACAAACTCTACAACTGTGCAGACTCGCAGGTTTGAGCCTTTGGTCAGAGTGCATCCATTTGTTTGTGGTCGAACCTTGGGAACGGACAAGCAAATTCTTTCCCTGCTCAGGGGAGTTAAAGAGACTAATTTATTGGACTGTCAGTTGATACTGGCCTTCAATCCTGTGACTTCACGAGCTGGAACTGACACAGAGGAAGCATTAAAGAAAATTCCAGCTGATAAACCAGCAGTACTGGTGACAATGCACCATACCTTCAACCCTGCCTACACATGCCCCAGTGTAAATACATCATCTCAATTGAACAATGTGGAACACGTTAATGTGCTCTTCCACGACTCTCATCACGGTCTTCTTAGGTGTCCAACAAATGAACATGCAATTGCCAAACTTCAGTCGGTCTTAAACCAATACATGTAAACAGTCTTGCTTCAAACGCTTTAACTGTCAATCACTGAAAATGACACTGCCATGTATTTATGCTGTATGATCATAtgagaagacaaaaacaacaagccagctaataaacaactaataaaCCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219788.1 False 1097 mRNA 0.43 7 19514080 19516509
XM_043219789.1 True 1108 mRNA 0.43 7 19514080 19516523
XM_043219790.1 False 905 mRNA 0.43 5 19514080 19516500

Neighbor

gene id symbol gene type direction distance location
itpkb itpkb,LOC107602213,LOC107676256,LOC107716604,LOC107727648,LOC107598056,LOC107675080 coding downstream 26730 19455804 ~ 19487350 (-)
nsl1 nsl1,LOC107553458,LOC107676260,LOC107558949,LOC107675087 coding downstream 255382 19256688 ~ 19258698 (-)
adat2 adat2,LOC107689443,LOC107727656,LOC107553463,LOC107716491 coding downstream 281263 19179809 ~ 19232817 (-)
hivep2a hivep2a,LOC107553466,LOC107689444,LOC107727600,LOC107716448,LOC107558946,LOC107675072 coding downstream 348072 19096279 ~ 19166008 (-)
si:ch211-202p1.5 LOC107689457,LOC107727565,LOC107717067,LOC107675103,LOC107558944,LOC107553437 coding downstream 426895 19082545 ~ 19087185 (-)
slc30a2 slc30a2,slc30a3,LOC107598103,LOC107675070 coding upstream 25854 19542377 ~ 19554327 (-)
dnajc5ga dnajc5g,dnajc5ga,LOC107727634,LOC107675096,LOC107716684,LOC107598061,LOC103043078 coding upstream 100238 19616761 ~ 19628027 (-)
cad cad coding upstream 112263 19628786 ~ 19647088 (-)
LOC122324982 si:dkey-221h15.4,LOC107602180,LOC107676237,LOC107727604,LOC107727605 coding upstream 132665 19649188 ~ 19651129 (-)
LOC122325502 galnt14,LOC107716567,LOC107676246,LOC107727639,LOC107675076 coding upstream 310577 19827100 ~ 19849045 (-)
G140175 NA non-coding downstream 65368 19445828 ~ 19448712 (-)
G140152 NA non-coding downstream 173020 19335079 ~ 19341060 (-)
G139940 NA non-coding downstream 263290 19224380 ~ 19250790 (-)
G139903 NA non-coding downstream 353923 19159838 ~ 19160157 (-)
G139871 NA non-coding downstream 470166 19040790 ~ 19043914 (-)
G140240 adat2,LOC107727656,LOC107553463,LOC107689443,LOC107716491 non-coding upstream 220417 19736940 ~ 19740363 (-)
G140248 NA non-coding upstream 283999 19800522 ~ 19801668 (-)
G140265 ehd3,LOC107716590,LOC107675095,LOC107727655,LOC103043599,LOC106520014 non-coding upstream 389108 19905631 ~ 19909647 (-)
G140304 NA non-coding upstream 631757 20148280 ~ 20167998 (-)
G140315 NA non-coding upstream 750145 20266668 ~ 20268266 (-)
angel2 LOC107676245,LOC107553457,LOC107727638,LOC107675074,LOC107558950 other downstream 210112 19298234 ~ 19303968 (-)
LOC122324949 LOC107676261,LOC107727654,LOC107553459 other downstream 251128 19261466 ~ 19262952 (-)
batf3 batf3,LOC107558935,LOC107676231,LOC107553434,LOC107727593,LOC107675089 other downstream 257808 19254734 ~ 19256272 (-)
G139706 LOC107683600,LOC107601464 other downstream 1067131 18406027 ~ 18446949 (-)
adgrf3b LOC107732426,LOC107698325,LOC107553480,LOC107696096,LOC107601465,LOC107719098 other downstream 1163958 18343463 ~ 18350122 (-)
trim54 trim54,LOC107602207,LOC107675051,LOC107598093 other upstream 85009 19601532 ~ 19615202 (-)
G140227 cad other upstream 541101 20057624 ~ 20059603 (-)
G140277 cad,LOC107602171 other upstream 545079 20061602 ~ 20062977 (-)
nkain2 nkain2,LOC107598078,LOC107675106,LOC107727617,LOC107602191 other upstream 894106 20410629 ~ 20542249 (-)
pkib pkib,LOC107675049,LOC107598105,LOC107602189 other upstream 1117773 20634296 ~ 20658380 (-)

Expression


Co-expression Network