LOC122325007 (LOC107726733,LOC107726732,LOC107726734)


Basic Information

Item Value
gene id LOC122325007
gene name LOC107726733,LOC107726732,LOC107726734
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 22895007 ~ 22899921 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219822.1
GGTTCAATATGTGCATTATACGATCAGTTGACACTGTTTGTCAGCTTTTGAAAGGAAAGATGATCACTTTATCTCTTGTTCTGGTCTTTATTACAGTCCAGTGGTCCTGGGCTCAGCAAGATCCTCTTCTGCCTTTCTCTGAACACTTGGACCTCGAGCACAAGGTGCGGCTGAAGTGGGGATTTGATGAGATCCGGGACACCATCTTGTTTGAGCTCACCTTTAACACTGTCGGCTGGGTTGGTTTCGGCTTCAGCCCCAAAGGAGGAATGACTGGAGCCGACGTCGTGATTGGAGGAGTTGGACCCAAAGGAAGTTACTTCACGgacCGTCATGCTGTGGGGACATCAATTCCTCTGGTTGACAAGCAACAGAACTCCAAACTCCTGTCTCTGACAGAGTCTGATGGGAAAACGGTCATGAAGTTTCAGAGGTCCATCACTTCCTGTGACGAAAACGATTTGCCCATCACCGATCTCCCCATGAAGCTGATCTACGCGTATGGAGAGACTGATGAAATCGCGTACCATGGCAACCGAAGAGGCACAAAGGAGCTGAACCTGTTGAAGTACATGCCTCAGTCCAACCCTCCAAACAGCAACTTTTTTGACATCACTATGGCCAATTTCACTGTGCCGGCCAACCAAACCTACTATCACTGCAAGATCATGAAAACCCCAACATTTGATCATAAACGGCACATTTATCGCATTGCGCCGGTGATCACAAACATTGACCTCGTGCATCATCTTGCGCTGTACCTATGTCCTCCGAGCGTGACCGAACCATCTGAGGCTCAGTGTACCGCATCGATAATAACCGCCTTGTGTATGGAGATGGTGGCTGTGTGGGCAGTTGGCGGAGAGGCTTTTCAGCTTCCAGAAGCAGCAGGACTTCCAATTGGAGGAAATATTAAAGACTATTTCTACAGACTTGAAGTGCATTACAACAACCACAATAAACTTACAGGTCGAGTTGATAGCTCAGGTCTGCGATTGTATTACACATCTGAACTCCGTCAGCACGATGCAGGTATTCTGATTACGGGGCTTGCAGTGGCCCCGGGGTACGCCATCCCACCCAAAGCCAAATCCTTCCTCACGTACGGTCTGTGCGACACTGCTTATATTCCAAAGGTTCTGAAGACGTCAAATGATCTTCAGGTGTTCTCCGTGATGCTGCACACACACTTAGCTGGGAGAAAGTTGCGAGTCGGACATTTCAGAGGAGGTAAACAGATTGATTTCCTAGCGAAGGATGAAAACTATGATTTTGATTATCAGGAAGTCACAAACTTGGGTAAAACTAAGATCGTTAAGTTGGGAGACAAATTGCTGGTGGAGTGCACCTATAATACTGAGAACCGCAACACACTCACATGGGGGGGATTTTCAACTTCAGATGAGATGTGTTTGGCCTTCCTCTTCTACTATCCAGTTATGAATCTGAGCACCTGTGTGAGCCTCCCTAATACAACCACTTTAATATCTGAGATGGGAGCAAAAGATCAAGATACTTGGCTCAAAATGATGTCCACAAAGACTTGGACTGACACGTCTATTAATCAGTACCAACAAACACTGAAGAGAATCAACCAGCTCGTCATAGTCATGAACTCAAATAACAACATGTCAAGCAGCTCAGGGCTAATTCCTGACCTCGAAGCCATCCCATCTGAATCCTGTGTGAGCAGCAGTGCCACCAAAAGTCTTTCTAATCAGGACACAACCAAGGACCTTCATGATAATCATCACCTCCATCATCTTTGCCCGACATAAACTTGCAACCGAAAAACAAGTTGAGCAAactatgtaactttttttttttaataaatcacagtACAGTGTGAA

Function

NR:

description
PREDICTED: DBH-like monooxygenase protein 2 homolog

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005507 copper ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219822.1 True 1850 mRNA 0.46 13 22895007 22899921

Neighbor

gene id symbol gene type direction distance location
LOC122325205 LOC107726734 coding upstream 1129 22889804 ~ 22893878 (+)
LOC122325206 LOC107726734 coding upstream 6336 22884107 ~ 22888671 (+)
LOC122325208 LOC107726734 coding upstream 12031 22878750 ~ 22882976 (+)
efr3bb efr3bb,ccl33.2,LOC107726755,LOC107678842,LOC107697142,LOC107549699 coding upstream 55561 22807159 ~ 22839446 (+)
LOC122325427 NA coding upstream 105871 22787465 ~ 22789136 (+)
LOC122325009 LOC107726732,LOC107549670,LOC107726733,LOC107697073,LOC107549671,LOC107697074,LOC107553823,LOC107678815 coding downstream 1063 22900984 ~ 22906361 (+)
LOC122325008 LOC107726732,LOC107678815,LOC107697073,LOC107549671,LOC107549670,LOC107697074,LOC107726733 coding downstream 7603 22907524 ~ 22914772 (+)
dusp23a LOC107726750,LOC107678830 coding downstream 15395 22915316 ~ 22917280 (+)
unc93a unc93a,LOC107678861,LOC107743326,LOC107697148 coding downstream 133778 23033699 ~ 23038040 (+)
ttll2 LOC107678816,LOC107727576,LOC107743327,LOC107697071,LOC107549674,LOC107603067 coding downstream 139901 23039822 ~ 23042379 (+)
G141091 NA non-coding upstream 337505 22557229 ~ 22557502 (+)
G141084 NA non-coding upstream 352475 22542136 ~ 22542532 (+)
G141081 NA non-coding upstream 353680 22541118 ~ 22541327 (+)
LOC122324401 NA non-coding upstream 780140 22098405 ~ 22114867 (+)
G141121 NA non-coding downstream 20772 22920693 ~ 22923128 (+)
G141168 LOC107603093,LOC107678851,LOC107549708,LOC107727631,LOC107697145 non-coding downstream 166666 23066587 ~ 23073665 (+)
LOC122324747 NA non-coding downstream 294700 23194621 ~ 23206082 (+)
G141207 NA non-coding downstream 430270 23330191 ~ 23332366 (+)
G141216 NA non-coding downstream 488571 23388492 ~ 23408824 (+)
si:ch211-203k16.3 LOC107549701,LOC107603096,LOC107697150,LOC108424433,LOC108257753 other upstream 34680 22842805 ~ 22860327 (+)
matn3a matn3a other upstream 140846 22744412 ~ 22754161 (+)
fkbp1b fkbp1b other upstream 377324 22506727 ~ 22517683 (+)
ubxn2a LOC107742702,LOC107600119,LOC107603085,LOC107697178,LOC107750080,LOC107667622 other upstream 418233 22471761 ~ 22476774 (+)
G140785 NA other upstream 1050306 21844146 ~ 21844701 (+)
pln NA other downstream 443794 23343715 ~ 23351655 (+)
G141475 NA other downstream 1172950 24072871 ~ 24074423 (+)
G141524 NA other downstream 1540322 24440243 ~ 24493381 (+)
pals1b mpp5b,LOC107568213,LOC107704059 other downstream 1557069 24456990 ~ 24482661 (+)
LOC122325234 tsta3,zgc:153776,LOC107672947,LOC107655839,LOC107559101,LOC107728120 other downstream 2068959 24968880 ~ 24994837 (+)

Expression


Co-expression Network